Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01257

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
1,383,559	-				-0.6
1,383,562	+				-0.3
1,383,573	+				-0.0
1,383,587	+				+0.0
1,383,595	-				+0.0
1,383,601	+				-0.0
1,383,613	+				+0.7
1,383,614	-				-0.4
1,383,643	+				-1.0
1,383,664	+		CCNA_01256	0.10	+0.6
1,383,676	+		CCNA_01256	0.11	+0.1
1,383,681	+		CCNA_01256	0.12	+0.1
1,383,730	-		CCNA_01256	0.17	-0.2
1,383,754	-		CCNA_01256	0.19	+0.3
1,383,756	+		CCNA_01256	0.19	-0.2
1,383,764	-		CCNA_01256	0.20	+0.5
1,383,802	+		CCNA_01256	0.24	-0.7
1,383,802	+		CCNA_01256	0.24	-0.3
1,383,810	-		CCNA_01256	0.25	-1.2
1,383,810	-		CCNA_01256	0.25	-0.3
1,383,810	-		CCNA_01256	0.25	+1.5
1,383,866	-		CCNA_01256	0.30	-0.3
1,383,881	+		CCNA_01256	0.32	-3.2
1,383,891	+		CCNA_01256	0.33	+0.4
1,383,898	+		CCNA_01256	0.34	-0.9
1,383,919	+		CCNA_01256	0.36	-0.2
1,383,927	-		CCNA_01256	0.36	-1.1
1,383,944	+		CCNA_01256	0.38	-0.2
1,383,944	+		CCNA_01256	0.38	-2.1
1,383,976	+		CCNA_01256	0.41	+0.6
1,383,976	+		CCNA_01256	0.41	-0.2
1,383,979	-		CCNA_01256	0.42	+0.5
1,383,993	+		CCNA_01256	0.43	-0.4
1,384,041	+		CCNA_01256	0.48	+0.0
1,384,043	+		CCNA_01256	0.48	+0.1
1,384,060	-		CCNA_01256	0.50	-0.8
1,384,069	+		CCNA_01256	0.51	-1.0
1,384,069	+		CCNA_01256	0.51	+0.4
1,384,077	-		CCNA_01256	0.52	-0.2
1,384,079	-		CCNA_01256	0.52	+1.6
1,384,089	-		CCNA_01256	0.53	+0.4
1,384,112	+		CCNA_01256	0.55	-0.2
1,384,120	+		CCNA_01256	0.56	-1.6
1,384,154	-		CCNA_01256	0.59	+0.5
1,384,161	+		CCNA_01256	0.60	-0.4
1,384,161	+		CCNA_01256	0.60	-0.7
1,384,161	+		CCNA_01256	0.60	+0.1
1,384,169	-		CCNA_01256	0.61	+0.5
1,384,169	-		CCNA_01256	0.61	+0.8
1,384,169	-		CCNA_01256	0.61	-1.2
1,384,169	-		CCNA_01256	0.61	+1.3
1,384,169	-		CCNA_01256	0.61	-0.5
1,384,192	+		CCNA_01256	0.63	-0.5
1,384,293	-		CCNA_01256	0.73	-0.3
1,384,293	-		CCNA_01256	0.73	+0.8
1,384,303	-		CCNA_01256	0.74	-0.2
1,384,306	+		CCNA_01256	0.74	-0.1
1,384,314	-		CCNA_01256	0.75	+1.2
1,384,316	+		CCNA_01256	0.76	-1.1
1,384,376	+		CCNA_01256	0.82	-1.8
1,384,384	-		CCNA_01256	0.82	-0.3
1,384,449	+		CCNA_01256	0.89	-0.9
1,384,462	-				+0.2
1,384,521	-				+0.2
1,384,545	-				+0.2
1,384,545	-				+0.0
1,384,593	-				-0.5
1,384,612	-				+1.1
1,384,642	-				+0.8
1,384,649	-				+0.2
1,384,680	+		CCNA_01257	0.13	+2.1
1,384,748	+		CCNA_01257	0.20	+0.1
1,384,837	-		CCNA_01257	0.29	+0.5
1,385,079	-		CCNA_01257	0.55	-0.3
1,385,093	-		CCNA_01257	0.56	-0.8
1,385,093	-		CCNA_01257	0.56	+0.0
1,385,128	+		CCNA_01257	0.60	+1.0
1,385,128	+		CCNA_01257	0.60	+0.0
1,385,138	+		CCNA_01257	0.61	+0.8
1,385,146	-		CCNA_01257	0.62	+0.2
1,385,146	-		CCNA_01257	0.62	+0.0
1,385,151	+		CCNA_01257	0.62	+0.3
1,385,221	+		CCNA_01257	0.69	+1.2
1,385,221	+		CCNA_01257	0.69	-0.8
1,385,221	+		CCNA_01257	0.69	-1.6
1,385,233	+		CCNA_01257	0.71	+0.3
1,385,271	-		CCNA_01257	0.75	+0.2
1,385,277	+		CCNA_01257	0.75	-0.9
1,385,284	-		CCNA_01257	0.76	-0.2
1,385,320	+		CCNA_01257	0.80	+0.7
1,385,322	+		CCNA_01257	0.80	-1.7
1,385,372	+		CCNA_01257	0.85	-0.6
1,385,395	+		CCNA_01257	0.88	-1.9
1,385,445	+				+0.1
1,385,445	+				-0.4
1,385,447	+				-1.3
1,385,455	-				-1.1
1,385,479	-				-0.2
1,385,515	+				+1.0
1,385,526	+				+0.5
1,385,536	-				+2.1
1,385,572	-				+0.5
1,385,580	-		CCNA_01258	0.11	-1.8
1,385,603	+		CCNA_01258	0.14	+0.0
1,385,630	+		CCNA_01258	0.18	+0.9
1,385,642	+		CCNA_01258	0.20	+0.1
1,385,646	+		CCNA_01258	0.21	-2.2
1,385,646	+		CCNA_01258	0.21	+0.2
1,385,665	+		CCNA_01258	0.24	-0.6
1,385,689	+		CCNA_01258	0.27	-0.3
1,385,741	+		CCNA_01258	0.35	-0.1
1,385,758	-		CCNA_01258	0.38	-0.1
1,385,758	-		CCNA_01258	0.38	+0.4
1,385,794	-		CCNA_01258	0.43	+0.6
1,385,819	+		CCNA_01258	0.47	-0.3
1,385,819	+		CCNA_01258	0.47	+0.6
1,385,827	-		CCNA_01258	0.48	+0.0
1,385,827	-		CCNA_01258	0.48	+0.2
1,385,827	-		CCNA_01258	0.48	-0.4
1,385,831	-		CCNA_01258	0.49	-2.1
1,385,869	+		CCNA_01258	0.54	+0.2
1,385,872	-		CCNA_01258	0.55	-0.2
1,385,887	-		CCNA_01258	0.57	-0.6
1,385,959	-		CCNA_01258	0.68	+0.4
1,385,978	-		CCNA_01258	0.71	-0.3
1,385,978	-		CCNA_01258	0.71	-0.6
1,385,985	+		CCNA_01258	0.72	+0.5
1,386,002	-		CCNA_01258	0.74	-0.6
1,386,004	+		CCNA_01258	0.75	-0.1
1,386,013	-		CCNA_01258	0.76	-1.3
1,386,027	-		CCNA_01258	0.78	+0.4
1,386,047	+		CCNA_01258	0.81	-0.8
1,386,083	-		CCNA_01258	0.87	-0.6
1,386,090	-		CCNA_01258	0.88	-0.0
1,386,101	+		CCNA_01258	0.89	+0.0
1,386,121	-				-0.8
1,386,143	+				+0.5
1,386,147	+				-0.2
1,386,160	-				+0.8
1,386,173	+				-0.0
1,386,239	-				+0.4
1,386,255	+				+0.5
1,386,288	+				+0.1
1,386,303	+				+0.5
1,386,343	+				+1.4
1,386,344	-				-1.8
1,386,375	-				-0.3
1,386,425	+		CCNA_01259	0.13	+0.3
1,386,501	-		CCNA_01259	0.23	-0.3