Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01168

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
1,285,623	+		CCNA_01167	0.17	-0.2
1,285,623	+		CCNA_01167	0.17	-0.5
1,285,623	+		CCNA_01167	0.17	+0.7
1,285,631	-		CCNA_01167	0.18	+0.0
1,285,631	-		CCNA_01167	0.18	-0.1
1,285,638	+		CCNA_01167	0.19	-1.2
1,285,643	+		CCNA_01167	0.19	+0.1
1,285,646	-		CCNA_01167	0.19	+0.4
1,285,646	-		CCNA_01167	0.19	-0.0
1,285,651	-		CCNA_01167	0.20	-0.4
1,285,651	-		CCNA_01167	0.20	-1.5
1,285,673	+		CCNA_01167	0.22	-0.3
1,285,695	+		CCNA_01167	0.24	+0.8
1,285,700	+		CCNA_01167	0.24	+0.1
1,285,703	-		CCNA_01167	0.24	+0.3
1,285,722	+		CCNA_01167	0.26	-0.5
1,285,722	+		CCNA_01167	0.26	+1.8
1,285,737	+		CCNA_01167	0.27	-1.8
1,285,737	+		CCNA_01167	0.27	-0.1
1,285,737	+		CCNA_01167	0.27	+0.3
1,285,743	-		CCNA_01167	0.28	-0.7
1,285,750	-		CCNA_01167	0.28	-0.2
1,285,760	+		CCNA_01167	0.29	+0.4
1,285,768	-		CCNA_01167	0.30	-1.2
1,285,768	-		CCNA_01167	0.30	-0.1
1,285,776	-		CCNA_01167	0.30	-0.4
1,285,782	+		CCNA_01167	0.31	-0.4
1,285,788	+		CCNA_01167	0.32	-0.9
1,285,795	-		CCNA_01167	0.32	-0.2
1,285,884	+		CCNA_01167	0.40	+0.7
1,285,884	+		CCNA_01167	0.40	+0.3
1,285,884	+		CCNA_01167	0.40	+0.3
1,285,884	+		CCNA_01167	0.40	+0.2
1,285,891	-		CCNA_01167	0.40	+0.2
1,285,892	-		CCNA_01167	0.40	-0.5
1,285,892	-		CCNA_01167	0.40	-0.0
1,285,892	-		CCNA_01167	0.40	-0.3
1,285,892	-		CCNA_01167	0.40	-0.5
1,285,892	-		CCNA_01167	0.40	-0.7
1,285,935	+		CCNA_01167	0.44	+0.2
1,285,958	+		CCNA_01167	0.46	+0.1
1,285,959	-		CCNA_01167	0.46	-0.0
1,285,978	+		CCNA_01167	0.48	-0.4
1,286,031	-		CCNA_01167	0.52	+0.2
1,286,063	-		CCNA_01167	0.55	-1.0
1,286,086	-		CCNA_01167	0.57	-0.5
1,286,107	+		CCNA_01167	0.59	-0.4
1,286,112	-		CCNA_01167	0.59	-0.3
1,286,118	+		CCNA_01167	0.60	+0.0
1,286,155	-		CCNA_01167	0.63	+0.2
1,286,155	-		CCNA_01167	0.63	+0.2
1,286,173	-		CCNA_01167	0.65	+0.5
1,286,179	-		CCNA_01167	0.65	+0.6
1,286,299	-		CCNA_01167	0.75	-1.0
1,286,299	-		CCNA_01167	0.75	-0.1
1,286,299	-		CCNA_01167	0.75	-1.0
1,286,310	+		CCNA_01167	0.76	-1.2
1,286,318	-		CCNA_01167	0.77	-0.8
1,286,318	-		CCNA_01167	0.77	+0.4
1,286,318	-		CCNA_01167	0.77	-0.1
1,286,351	+		CCNA_01167	0.80	+0.2
1,286,359	-		CCNA_01167	0.81	-1.3
1,286,361	+		CCNA_01167	0.81	+0.0
1,286,397	-		CCNA_01167	0.84	-0.4
1,286,442	+		CCNA_01167	0.88	+0.1
1,286,442	+		CCNA_01167	0.88	+0.5
1,286,442	+		CCNA_01167	0.88	+0.3
1,286,450	-		CCNA_01167	0.88	-0.2
1,286,480	-				-0.1
1,286,497	-				+0.3
1,286,533	+				+0.5
1,286,553	+				-1.6
1,286,561	-				+1.1
1,286,607	-				+0.1
1,286,645	-				+0.3
1,286,692	-				-1.0
1,286,958	+		CCNA_01168	0.31	+0.4
1,287,006	-		CCNA_01168	0.35	-2.1
1,287,193	+		CCNA_01168	0.51	+0.0
1,287,237	+		CCNA_01168	0.54	+0.5
1,287,261	-		CCNA_01168	0.56	-0.6
1,287,261	-		CCNA_01168	0.56	-0.1
1,287,766	+				-0.6
1,287,766	+				-0.1
1,287,781	+				-1.3
1,287,830	+				+0.5
1,287,830	+				-0.3
1,287,870	+				+0.5
1,287,883	-				-0.4
1,287,902	-				+0.0
1,287,947	-				-0.9
1,287,961	+		CCNA_01169	0.10	+0.6
1,287,985	+		CCNA_01169	0.13	+0.6
1,288,056	+		CCNA_01169	0.22	+0.8
1,288,067	+		CCNA_01169	0.23	-1.0
1,288,067	-		CCNA_01169	0.23	+1.3
1,288,125	+		CCNA_01169	0.30	-1.4
1,288,128	-		CCNA_01169	0.31	+0.6
1,288,131	-		CCNA_01169	0.31	-0.6
1,288,208	-		CCNA_01169	0.40	+0.5
1,288,255	-		CCNA_01169	0.46	-1.3
1,288,307	+		CCNA_01169	0.53	+0.3
1,288,307	+		CCNA_01169	0.53	-0.1
1,288,309	+		CCNA_01169	0.53	-0.3
1,288,310	-		CCNA_01169	0.53	+0.8
1,288,310	-		CCNA_01169	0.53	+1.3
1,288,315	-		CCNA_01169	0.54	-1.0
1,288,315	-		CCNA_01169	0.54	-1.3
1,288,327	-		CCNA_01169	0.55	+0.5
1,288,343	+		CCNA_01169	0.57	+0.3
1,288,375	+		CCNA_01169	0.61	-0.4
1,288,424	-		CCNA_01169	0.67	+0.5
1,288,444	+		CCNA_01169	0.69	-0.3
1,288,444	+		CCNA_01169	0.69	+0.4
1,288,480	-		CCNA_01169	0.74	-1.6
1,288,509	-		CCNA_01169	0.77	+2.3
1,288,530	-		CCNA_01169	0.80	-0.0
1,288,548	+		CCNA_01169	0.82	-0.4
1,288,564	+		CCNA_01169	0.84	-0.1
1,288,582	-		CCNA_01169	0.86	+0.6
1,288,635	-				-0.1
1,288,653	+				-0.3
1,288,687	-				-0.1
1,288,708	+				+0.5
1,288,733	+				-1.2