Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01162

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
1,268,976	-		CCNA_01161	0.34	-1.2
1,268,976	-		CCNA_01161	0.34	-1.5
1,269,070	-		CCNA_01161	0.41	+0.3
1,269,088	-		CCNA_01161	0.42	+0.8
1,269,124	+		CCNA_01161	0.45	-1.5
1,269,124	-		CCNA_01161	0.45	-0.3
1,269,129	+		CCNA_01161	0.45	+0.2
1,269,129	+		CCNA_01161	0.45	-0.6
1,269,129	+		CCNA_01161	0.45	-0.1
1,269,132	-		CCNA_01161	0.45	-0.4
1,269,137	-		CCNA_01161	0.46	-0.6
1,269,137	-		CCNA_01161	0.46	-0.4
1,269,137	-		CCNA_01161	0.46	+0.6
1,269,137	-		CCNA_01161	0.46	-1.7
1,269,137	-		CCNA_01161	0.46	-0.2
1,269,150	+		CCNA_01161	0.47	-0.2
1,269,150	+		CCNA_01161	0.47	+0.2
1,269,150	+		CCNA_01161	0.47	-1.7
1,269,187	-		CCNA_01161	0.50	-1.4
1,269,216	-		CCNA_01161	0.52	+2.4
1,269,221	-		CCNA_01161	0.52	-1.5
1,269,224	-		CCNA_01161	0.52	-1.6
1,269,226	+		CCNA_01161	0.52	-0.9
1,269,240	-		CCNA_01161	0.53	-0.5
1,269,268	+		CCNA_01161	0.56	+0.9
1,269,325	+		CCNA_01161	0.60	+0.1
1,269,333	-		CCNA_01161	0.60	-0.9
1,269,333	-		CCNA_01161	0.60	+0.3
1,269,376	+		CCNA_01161	0.64	+0.3
1,269,384	-		CCNA_01161	0.64	+2.0
1,269,384	-		CCNA_01161	0.64	-0.5
1,269,415	-		CCNA_01161	0.66	-1.0
1,269,435	+		CCNA_01161	0.68	+0.9
1,269,435	+		CCNA_01161	0.68	+2.8
1,269,435	+		CCNA_01161	0.68	+0.3
1,269,456	+		CCNA_01161	0.69	+0.3
1,269,460	-		CCNA_01161	0.70	-0.3
1,269,548	+		CCNA_01161	0.76	-1.3
1,269,561	+		CCNA_01161	0.77	-0.1
1,269,561	+		CCNA_01161	0.77	+0.2
1,269,561	+		CCNA_01161	0.77	+0.1
1,269,561	+		CCNA_01161	0.77	-0.4
1,269,569	-		CCNA_01161	0.78	-0.1
1,269,571	+		CCNA_01161	0.78	+0.5
1,269,574	-		CCNA_01161	0.78	+0.1
1,269,579	-		CCNA_01161	0.79	-0.7
1,269,649	+		CCNA_01161	0.84	-0.1
1,269,762	+				-1.1
1,269,767	+				+0.0
1,269,777	-				+0.0
1,269,848	+				+0.3
1,270,034	+				+0.3
1,270,034	+				-0.2
1,270,048	-				-0.6
1,270,135	-				-0.4
1,270,156	-				-0.9
1,270,173	-		CCNA_01162	0.10	+1.0
1,270,182	+		CCNA_01162	0.11	+0.1
1,270,190	-		CCNA_01162	0.11	-0.6
1,270,201	+		CCNA_01162	0.11	-0.5
1,270,209	-		CCNA_01162	0.12	-0.5
1,270,209	-		CCNA_01162	0.12	-0.2
1,270,209	-		CCNA_01162	0.12	-1.5
1,270,236	-		CCNA_01162	0.13	+0.8
1,270,253	+		CCNA_01162	0.14	-0.4
1,270,270	-		CCNA_01162	0.14	-0.3
1,270,276	+		CCNA_01162	0.15	-0.7
1,270,307	-		CCNA_01162	0.16	+0.3
1,270,314	-		CCNA_01162	0.16	-2.1
1,270,324	+		CCNA_01162	0.17	-0.0
1,270,356	-		CCNA_01162	0.18	-1.1
1,270,411	-		CCNA_01162	0.21	-1.4
1,270,425	-		CCNA_01162	0.21	-1.3
1,270,441	+		CCNA_01162	0.22	-0.3
1,270,442	+		CCNA_01162	0.22	+0.8
1,270,444	-		CCNA_01162	0.22	-1.0
1,270,483	+		CCNA_01162	0.24	-2.7
1,270,485	+		CCNA_01162	0.24	+0.1
1,270,542	-		CCNA_01162	0.26	-0.5
1,270,560	+		CCNA_01162	0.27	+0.1
1,270,568	-		CCNA_01162	0.27	-0.2
1,270,569	+		CCNA_01162	0.27	-0.5
1,270,576	+		CCNA_01162	0.28	-0.3
1,270,576	+		CCNA_01162	0.28	-0.2
1,270,576	+		CCNA_01162	0.28	+0.2
1,270,576	+		CCNA_01162	0.28	-1.1
1,270,576	+		CCNA_01162	0.28	-0.3
1,270,583	+		CCNA_01162	0.28	+0.4
1,270,583	+		CCNA_01162	0.28	-0.5
1,270,584	-		CCNA_01162	0.28	-1.8
1,270,584	-		CCNA_01162	0.28	+2.5
1,270,584	-		CCNA_01162	0.28	-0.8
1,270,584	-		CCNA_01162	0.28	+0.5
1,270,591	-		CCNA_01162	0.28	-0.4
1,270,615	-		CCNA_01162	0.29	-1.5
1,270,642	-		CCNA_01162	0.31	-0.1
1,270,649	+		CCNA_01162	0.31	+0.2
1,270,657	-		CCNA_01162	0.31	-1.0
1,270,657	-		CCNA_01162	0.31	-2.1
1,270,657	-		CCNA_01162	0.31	-2.0
1,270,659	-		CCNA_01162	0.31	-0.9
1,270,659	-		CCNA_01162	0.31	-0.9
1,270,661	+		CCNA_01162	0.31	-0.4
1,270,689	+		CCNA_01162	0.33	-0.6
1,270,717	+		CCNA_01162	0.34	+1.3
1,270,748	+		CCNA_01162	0.35	-0.4
1,270,825	-		CCNA_01162	0.38	+0.1
1,270,867	-		CCNA_01162	0.40	+1.3
1,270,955	+		CCNA_01162	0.44	-0.4
1,270,955	+		CCNA_01162	0.44	-0.4
1,270,955	+		CCNA_01162	0.44	-0.1
1,270,963	-		CCNA_01162	0.44	+0.5
1,270,986	+		CCNA_01162	0.45	-0.4
1,270,994	-		CCNA_01162	0.46	-0.9
1,270,994	-		CCNA_01162	0.46	-0.6
1,270,997	-		CCNA_01162	0.46	+0.3
1,271,044	+		CCNA_01162	0.48	+0.4
1,271,120	+		CCNA_01162	0.51	+0.0
1,271,170	+		CCNA_01162	0.53	-0.8
1,271,170	+		CCNA_01162	0.53	-1.4
1,271,181	+		CCNA_01162	0.54	-1.2
1,271,193	-		CCNA_01162	0.54	+0.6
1,271,208	-		CCNA_01162	0.55	-0.1
1,271,208	-		CCNA_01162	0.55	-0.7
1,271,222	+		CCNA_01162	0.56	-1.0
1,271,253	+		CCNA_01162	0.57	-0.7
1,271,266	-		CCNA_01162	0.58	-1.3
1,271,309	-		CCNA_01162	0.60	+0.5
1,271,355	+		CCNA_01162	0.62	-0.0
1,271,375	+		CCNA_01162	0.62	-0.7
1,271,454	+		CCNA_01162	0.66	-1.2
1,271,465	+		CCNA_01162	0.66	-0.1
1,271,473	-		CCNA_01162	0.67	-0.2
1,271,513	+		CCNA_01162	0.68	-0.3
1,271,529	-		CCNA_01162	0.69	-3.3
1,271,613	-		CCNA_01162	0.73	-0.5
1,271,647	-		CCNA_01162	0.74	-1.4
1,271,680	+		CCNA_01162	0.76	-0.4
1,271,680	+		CCNA_01162	0.76	-0.6
1,271,688	-		CCNA_01162	0.76	-0.3
1,271,688	-		CCNA_01162	0.76	-1.0
1,271,688	-		CCNA_01162	0.76	+0.8
1,271,705	-		CCNA_01162	0.77	-1.1
1,271,761	+		CCNA_01162	0.79	-1.4
1,271,798	+		CCNA_01162	0.81	-1.7
1,271,798	+		CCNA_01162	0.81	+1.8
1,271,806	+		CCNA_01162	0.81	+0.1
1,271,806	+		CCNA_01162	0.81	+0.1
1,271,845	+		CCNA_01162	0.83	-0.3
1,271,900	-		CCNA_01162	0.85	-2.1
1,271,958	+		CCNA_01162	0.88	-0.4
1,271,958	-		CCNA_01162	0.88	+0.3
1,271,971	-		CCNA_01162	0.88	+0.1
1,271,976	+		CCNA_01162	0.88	-0.2
1,271,976	-		CCNA_01162	0.88	-0.3
1,271,976	-		CCNA_01162	0.88	+0.6
1,271,976	-		CCNA_01162	0.88	-0.8
1,272,001	-		CCNA_01162	0.90	-1.4
1,272,040	+				+1.0
1,272,057	+				-0.1
1,272,063	+				+0.7
1,272,113	+				-0.9
1,272,113	+				+0.5
1,272,115	+				-0.2
1,272,139	+				-0.3
1,272,147	+				-0.9
1,272,147	-				-1.7
1,272,157	-				-2.8
1,272,177	-				-2.0
1,272,192	-				+0.7
1,272,238	-				-0.4
1,272,269	-				-0.6
1,272,280	+				-1.8
1,272,280	+				-0.1
1,272,281	+				+1.7
1,272,285	+				-0.4
1,272,301	+				+0.9
1,272,303	-				-1.2
1,272,356	-				+0.3
1,272,439	+				+1.3
1,272,461	+				-0.7
1,272,494	+				+0.4
1,272,494	-				-1.2
1,272,505	+				-0.7
1,272,527	+				+0.6
1,272,575	-				-1.5
1,272,577	-				-0.5
1,272,634	-				+1.8
1,272,648	+				+0.1
1,272,656	-				-0.7
1,272,666	-				-1.0
1,272,679	+				+0.0
1,272,696	+				+0.3
1,272,749	-				+0.2
1,272,761	+				+0.5
1,272,792	+				+1.5
1,272,792	+				+0.6
1,272,792	+				-0.3
1,272,795	-				+0.7
1,272,795	-				-0.2
1,272,800	-				+0.7
1,272,867	+				+0.7
1,272,867	+				+0.5
1,272,867	+				+0.7
1,272,875	-				-0.6
1,272,875	-				-0.1
1,272,875	-				-2.1
1,272,875	-				+0.1
1,272,894	+				+0.3
1,272,894	+				+0.2
1,272,896	+				-0.1
1,272,902	-				-0.1
1,272,923	-				-0.8
1,272,934	+				+0.4
1,272,939	+				+0.8
1,272,957	-				-0.4
1,273,005	-				-0.1
1,273,026	+				+0.7
1,273,026	+				+0.0
1,273,026	+				+0.8
1,273,027	-				+0.3
1,273,042	-				+1.5
1,273,124	+				+0.4
1,273,146	+				+1.1
1,273,179	+				+0.5
1,273,192	-				+0.5
1,273,211	-				+0.3
1,273,213	+				-0.2
1,273,225	+				+0.5
1,273,227	+				+0.2