Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_00466

Experiment: PYE with CHIR-090 40 ug/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCCNA_00465 and CCNA_00466 are separated by 157 nucleotidesCCNA_00466 and CCNA_00467 are separated by 3 nucleotides CCNA_00465: CCNA_00465 - UDP-galactopyranose mutase, at 477,921 to 479,033 _00465 CCNA_00466: CCNA_00466 - glycosyltransferase, at 479,191 to 480,435 _00466 CCNA_00467: CCNA_00467 - oligosaccharide translocase/flippase, at 480,439 to 481,710 _00467 Position (kb) 479 480 481Strain fitness (log2 ratio) -1 0 1at 479.009 kb on + strandat 479.009 kb on + strandat 479.009 kb on + strandat 479.017 kb on - strandat 479.026 kb on - strandat 479.106 kb on + strandat 479.178 kb on + strandat 480.434 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction PYE with CHIR-090 40 ug/mL
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479,009 + -0.1
479,009 + -0.9
479,009 + -0.1
479,017 - -0.4
479,026 - -0.0
479,106 + +0.4
479,178 + +0.1
480,434 + +0.2

Or see this region's nucleotide sequence