Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17840 and CA264_17845 are separated by 32 nucleotides CA264_17845 and CA264_17850 are separated by 90 nucleotides
CA264_17840: CA264_17840 - ATP-binding protein, at 4,147,680 to 4,148,861
_17840
CA264_17845: CA264_17845 - GNAT family N-acetyltransferase, at 4,148,894 to 4,149,826
_17845
CA264_17850: CA264_17850 - sodium:proton antiporter, at 4,149,917 to 4,151,887
_17850
Position (kb)
4148
4149
4150 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4147.943 kb on + strand, within CA264_17840 at 4147.955 kb on + strand, within CA264_17840 at 4147.967 kb on + strand, within CA264_17840 at 4148.315 kb on + strand, within CA264_17840 at 4148.496 kb on - strand, within CA264_17840 at 4148.522 kb on + strand, within CA264_17840 at 4148.523 kb on - strand, within CA264_17840 at 4148.526 kb on - strand, within CA264_17840 at 4148.536 kb on + strand, within CA264_17840 at 4148.613 kb on - strand, within CA264_17840 at 4148.803 kb on - strand at 4148.891 kb on + strand at 4148.904 kb on + strand at 4148.904 kb on + strand at 4148.905 kb on - strand at 4148.907 kb on + strand at 4148.927 kb on - strand at 4148.992 kb on + strand, within CA264_17845 at 4149.038 kb on + strand, within CA264_17845 at 4149.116 kb on + strand, within CA264_17845 at 4149.116 kb on + strand, within CA264_17845 at 4149.214 kb on + strand, within CA264_17845 at 4149.222 kb on - strand, within CA264_17845 at 4149.224 kb on - strand, within CA264_17845 at 4149.272 kb on + strand, within CA264_17845 at 4149.272 kb on + strand, within CA264_17845 at 4149.273 kb on - strand, within CA264_17845 at 4149.416 kb on + strand, within CA264_17845 at 4149.496 kb on - strand, within CA264_17845 at 4149.529 kb on + strand, within CA264_17845 at 4149.562 kb on - strand, within CA264_17845 at 4149.582 kb on - strand, within CA264_17845 at 4149.611 kb on + strand, within CA264_17845 at 4149.684 kb on + strand, within CA264_17845 at 4149.685 kb on - strand, within CA264_17845 at 4149.685 kb on - strand, within CA264_17845 at 4149.685 kb on - strand, within CA264_17845 at 4149.685 kb on - strand, within CA264_17845 at 4149.706 kb on + strand, within CA264_17845 at 4149.707 kb on - strand, within CA264_17845 at 4149.740 kb on + strand at 4149.740 kb on + strand at 4149.777 kb on - strand at 4149.835 kb on + strand at 4149.835 kb on + strand at 4149.836 kb on - strand at 4149.836 kb on - strand at 4149.836 kb on - strand at 4149.872 kb on + strand at 4149.977 kb on + strand at 4149.992 kb on + strand at 4149.992 kb on + strand at 4149.993 kb on - strand at 4150.123 kb on + strand, within CA264_17850 at 4150.123 kb on + strand, within CA264_17850 at 4150.222 kb on - strand, within CA264_17850 at 4150.222 kb on - strand, within CA264_17850 at 4150.222 kb on - strand, within CA264_17850 at 4150.272 kb on + strand, within CA264_17850 at 4150.273 kb on - strand, within CA264_17850 at 4150.304 kb on + strand, within CA264_17850 at 4150.305 kb on - strand, within CA264_17850 at 4150.344 kb on - strand, within CA264_17850 at 4150.419 kb on + strand, within CA264_17850 at 4150.431 kb on + strand, within CA264_17850 at 4150.481 kb on + strand, within CA264_17850 at 4150.615 kb on - strand, within CA264_17850 at 4150.615 kb on - strand, within CA264_17850
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 4,147,943 + CA264_17840 0.22 -1.8 4,147,955 + CA264_17840 0.23 -1.7 4,147,967 + CA264_17840 0.24 +0.0 4,148,315 + CA264_17840 0.54 -1.0 4,148,496 - CA264_17840 0.69 -0.8 4,148,522 + CA264_17840 0.71 -0.8 4,148,523 - CA264_17840 0.71 +0.4 4,148,526 - CA264_17840 0.72 +0.2 4,148,536 + CA264_17840 0.72 -1.0 4,148,613 - CA264_17840 0.79 -0.5 4,148,803 - -1.8 4,148,891 + -1.3 4,148,904 + +0.4 4,148,904 + -0.1 4,148,905 - -0.5 4,148,907 + +0.3 4,148,927 - +0.1 4,148,992 + CA264_17845 0.11 -1.4 4,149,038 + CA264_17845 0.15 -2.3 4,149,116 + CA264_17845 0.24 -0.9 4,149,116 + CA264_17845 0.24 -0.1 4,149,214 + CA264_17845 0.34 -0.3 4,149,222 - CA264_17845 0.35 -0.3 4,149,224 - CA264_17845 0.35 -0.2 4,149,272 + CA264_17845 0.41 -0.3 4,149,272 + CA264_17845 0.41 -0.4 4,149,273 - CA264_17845 0.41 +0.8 4,149,416 + CA264_17845 0.56 -0.0 4,149,496 - CA264_17845 0.65 -1.3 4,149,529 + CA264_17845 0.68 -0.1 4,149,562 - CA264_17845 0.72 +0.5 4,149,582 - CA264_17845 0.74 +0.2 4,149,611 + CA264_17845 0.77 -0.2 4,149,684 + CA264_17845 0.85 -0.4 4,149,685 - CA264_17845 0.85 +0.2 4,149,685 - CA264_17845 0.85 -0.6 4,149,685 - CA264_17845 0.85 +0.2 4,149,685 - CA264_17845 0.85 +0.1 4,149,706 + CA264_17845 0.87 -0.8 4,149,707 - CA264_17845 0.87 +1.1 4,149,740 + -0.0 4,149,740 + -0.3 4,149,777 - +0.4 4,149,835 + -0.7 4,149,835 + +0.3 4,149,836 - +0.1 4,149,836 - -3.2 4,149,836 - -1.8 4,149,872 + +0.3 4,149,977 + -0.6 4,149,992 + +0.9 4,149,992 + +1.8 4,149,993 - -0.4 4,150,123 + CA264_17850 0.10 -0.1 4,150,123 + CA264_17850 0.10 -1.2 4,150,222 - CA264_17850 0.15 +0.4 4,150,222 - CA264_17850 0.15 -0.1 4,150,222 - CA264_17850 0.15 +0.1 4,150,272 + CA264_17850 0.18 +0.2 4,150,273 - CA264_17850 0.18 -0.5 4,150,304 + CA264_17850 0.20 -0.1 4,150,305 - CA264_17850 0.20 +0.2 4,150,344 - CA264_17850 0.22 +0.9 4,150,419 + CA264_17850 0.25 -0.2 4,150,431 + CA264_17850 0.26 +0.1 4,150,481 + CA264_17850 0.29 +0.3 4,150,615 - CA264_17850 0.35 +0.3 4,150,615 - CA264_17850 0.35 +1.0
Or see this region's nucleotide sequence