Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15775 and CA264_15780 overlap by 20 nucleotides CA264_15780 and CA264_15785 are separated by 30 nucleotides CA264_15785 and CA264_15790 are separated by 238 nucleotides
CA264_15775: CA264_15775 - type III polyketide synthase, at 3,682,811 to 3,683,938
_15775
CA264_15780: CA264_15780 - SAM-dependent methyltransferase, at 3,683,919 to 3,684,620
_15780
CA264_15785: CA264_15785 - hypothetical protein, at 3,684,651 to 3,684,857
_15785
CA264_15790: CA264_15790 - hypothetical protein, at 3,685,096 to 3,685,542
_15790
Position (kb)
3684
3685 Strain fitness (log2 ratio)
-2
-1
0
1 at 3683.674 kb on - strand, within CA264_15775 at 3683.706 kb on + strand, within CA264_15775 at 3683.707 kb on - strand, within CA264_15775 at 3683.707 kb on - strand, within CA264_15775 at 3683.707 kb on - strand, within CA264_15775 at 3683.882 kb on - strand at 3683.893 kb on + strand at 3683.893 kb on + strand at 3683.894 kb on - strand at 3683.894 kb on - strand at 3683.908 kb on - strand at 3683.908 kb on - strand at 3683.908 kb on - strand at 3683.913 kb on - strand at 3683.924 kb on - strand at 3683.924 kb on - strand at 3684.040 kb on + strand, within CA264_15780 at 3684.040 kb on + strand, within CA264_15780 at 3684.165 kb on - strand, within CA264_15780 at 3684.213 kb on + strand, within CA264_15780 at 3684.214 kb on - strand, within CA264_15780 at 3684.297 kb on + strand, within CA264_15780 at 3684.297 kb on + strand, within CA264_15780 at 3684.445 kb on - strand, within CA264_15780 at 3684.564 kb on + strand at 3684.564 kb on + strand at 3684.619 kb on - strand at 3684.662 kb on + strand at 3684.662 kb on + strand at 3684.662 kb on + strand at 3684.668 kb on + strand at 3684.716 kb on + strand, within CA264_15785 at 3684.717 kb on - strand, within CA264_15785 at 3684.761 kb on - strand, within CA264_15785 at 3684.965 kb on - strand at 3684.989 kb on - strand at 3685.025 kb on + strand at 3685.025 kb on + strand at 3685.052 kb on + strand at 3685.082 kb on + strand at 3685.096 kb on - strand at 3685.096 kb on - strand at 3685.134 kb on + strand at 3685.135 kb on - strand at 3685.163 kb on + strand, within CA264_15790 at 3685.214 kb on - strand, within CA264_15790 at 3685.258 kb on + strand, within CA264_15790 at 3685.258 kb on + strand, within CA264_15790 at 3685.382 kb on + strand, within CA264_15790 at 3685.416 kb on + strand, within CA264_15790 at 3685.448 kb on - strand, within CA264_15790 at 3685.457 kb on + strand, within CA264_15790 at 3685.541 kb on - strand at 3685.663 kb on - strand at 3685.667 kb on + strand at 3685.668 kb on - strand at 3685.674 kb on - strand at 3685.674 kb on - strand at 3685.688 kb on - strand at 3685.691 kb on + strand at 3685.691 kb on + strand at 3685.691 kb on + strand at 3685.691 kb on + strand at 3685.692 kb on - strand at 3685.692 kb on - strand at 3685.790 kb on + strand at 3685.790 kb on + strand at 3685.791 kb on - strand at 3685.791 kb on - strand at 3685.791 kb on - strand at 3685.841 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 3,683,674 - CA264_15775 0.77 +0.3 3,683,706 + CA264_15775 0.79 +0.7 3,683,707 - CA264_15775 0.79 +0.3 3,683,707 - CA264_15775 0.79 +0.4 3,683,707 - CA264_15775 0.79 +1.5 3,683,882 - +0.4 3,683,893 + +0.1 3,683,893 + +1.4 3,683,894 - +0.1 3,683,894 - -0.9 3,683,908 - -0.0 3,683,908 - +0.6 3,683,908 - +1.2 3,683,913 - -0.5 3,683,924 - +0.2 3,683,924 - +0.4 3,684,040 + CA264_15780 0.17 +0.5 3,684,040 + CA264_15780 0.17 -0.2 3,684,165 - CA264_15780 0.35 +0.4 3,684,213 + CA264_15780 0.42 +0.4 3,684,214 - CA264_15780 0.42 -0.5 3,684,297 + CA264_15780 0.54 -0.0 3,684,297 + CA264_15780 0.54 -0.3 3,684,445 - CA264_15780 0.75 -0.1 3,684,564 + -1.2 3,684,564 + +0.4 3,684,619 - +0.1 3,684,662 + -0.1 3,684,662 + +0.3 3,684,662 + -0.5 3,684,668 + -0.7 3,684,716 + CA264_15785 0.31 -0.3 3,684,717 - CA264_15785 0.32 -2.0 3,684,761 - CA264_15785 0.53 -0.5 3,684,965 - +0.2 3,684,989 - +1.5 3,685,025 + +0.6 3,685,025 + -0.3 3,685,052 + -0.2 3,685,082 + -0.5 3,685,096 - -0.2 3,685,096 - -0.9 3,685,134 + +0.8 3,685,135 - -0.3 3,685,163 + CA264_15790 0.15 +0.9 3,685,214 - CA264_15790 0.26 -0.8 3,685,258 + CA264_15790 0.36 -0.8 3,685,258 + CA264_15790 0.36 +0.2 3,685,382 + CA264_15790 0.64 -0.5 3,685,416 + CA264_15790 0.72 -0.1 3,685,448 - CA264_15790 0.79 -0.5 3,685,457 + CA264_15790 0.81 +1.5 3,685,541 - -0.1 3,685,663 - +0.4 3,685,667 + -0.3 3,685,668 - +0.1 3,685,674 - -0.4 3,685,674 - +0.2 3,685,688 - +0.1 3,685,691 + -0.7 3,685,691 + +1.3 3,685,691 + -0.9 3,685,691 + -0.1 3,685,692 - -0.1 3,685,692 - -0.5 3,685,790 + -0.7 3,685,790 + +0.2 3,685,791 - -0.3 3,685,791 - -0.4 3,685,791 - +0.5 3,685,841 + +0.8
Or see this region's nucleotide sequence