Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15280 and CA264_15285 are separated by 1 nucleotides CA264_15285 and CA264_15290 are separated by 54 nucleotides
CA264_15280: CA264_15280 - tRNA 2-selenouridine synthase, at 3,576,423 to 3,577,451
_15280
CA264_15285: CA264_15285 - selenide, water dikinase SelD, at 3,577,453 to 3,578,505
_15285
CA264_15290: CA264_15290 - alpha/beta hydrolase, at 3,578,560 to 3,579,330
_15290
Position (kb)
3577
3578
3579 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3576.585 kb on - strand, within CA264_15280 at 3576.622 kb on + strand, within CA264_15280 at 3576.684 kb on - strand, within CA264_15280 at 3576.786 kb on + strand, within CA264_15280 at 3576.845 kb on - strand, within CA264_15280 at 3576.879 kb on - strand, within CA264_15280 at 3576.879 kb on - strand, within CA264_15280 at 3576.880 kb on + strand, within CA264_15280 at 3576.892 kb on + strand, within CA264_15280 at 3576.893 kb on - strand, within CA264_15280 at 3576.893 kb on - strand, within CA264_15280 at 3576.914 kb on + strand, within CA264_15280 at 3576.914 kb on + strand, within CA264_15280 at 3576.915 kb on - strand, within CA264_15280 at 3576.965 kb on - strand, within CA264_15280 at 3576.965 kb on - strand, within CA264_15280 at 3577.094 kb on + strand, within CA264_15280 at 3577.182 kb on + strand, within CA264_15280 at 3577.183 kb on - strand, within CA264_15280 at 3577.220 kb on - strand, within CA264_15280 at 3577.229 kb on - strand, within CA264_15280 at 3577.319 kb on - strand, within CA264_15280 at 3577.319 kb on - strand, within CA264_15280 at 3577.321 kb on - strand, within CA264_15280 at 3577.323 kb on + strand, within CA264_15280 at 3577.323 kb on + strand, within CA264_15280 at 3577.324 kb on - strand, within CA264_15280 at 3577.335 kb on + strand, within CA264_15280 at 3577.382 kb on - strand at 3577.382 kb on - strand at 3577.388 kb on + strand at 3577.388 kb on + strand at 3577.388 kb on + strand at 3577.439 kb on + strand at 3577.444 kb on + strand at 3577.444 kb on + strand at 3577.444 kb on + strand at 3577.461 kb on + strand at 3577.462 kb on - strand at 3577.478 kb on + strand at 3577.479 kb on - strand at 3577.519 kb on - strand at 3577.624 kb on - strand, within CA264_15285 at 3577.625 kb on - strand, within CA264_15285 at 3577.625 kb on - strand, within CA264_15285 at 3577.631 kb on + strand, within CA264_15285 at 3577.632 kb on - strand, within CA264_15285 at 3577.632 kb on - strand, within CA264_15285 at 3577.726 kb on - strand, within CA264_15285 at 3577.737 kb on - strand, within CA264_15285 at 3577.737 kb on - strand, within CA264_15285 at 3577.738 kb on + strand, within CA264_15285 at 3577.739 kb on - strand, within CA264_15285 at 3577.758 kb on + strand, within CA264_15285 at 3577.758 kb on + strand, within CA264_15285 at 3577.759 kb on - strand, within CA264_15285 at 3577.826 kb on + strand, within CA264_15285 at 3577.881 kb on + strand, within CA264_15285 at 3577.883 kb on + strand, within CA264_15285 at 3577.884 kb on + strand, within CA264_15285 at 3577.885 kb on - strand, within CA264_15285 at 3577.885 kb on - strand, within CA264_15285 at 3577.885 kb on - strand, within CA264_15285 at 3577.886 kb on + strand, within CA264_15285 at 3577.886 kb on + strand, within CA264_15285 at 3577.887 kb on - strand, within CA264_15285 at 3577.887 kb on - strand, within CA264_15285 at 3577.887 kb on - strand, within CA264_15285 at 3577.887 kb on - strand, within CA264_15285 at 3577.887 kb on - strand, within CA264_15285 at 3577.939 kb on - strand, within CA264_15285 at 3577.959 kb on + strand, within CA264_15285 at 3577.982 kb on + strand, within CA264_15285 at 3577.984 kb on + strand, within CA264_15285 at 3577.985 kb on - strand, within CA264_15285 at 3577.989 kb on - strand, within CA264_15285 at 3577.989 kb on - strand, within CA264_15285 at 3578.007 kb on - strand, within CA264_15285 at 3578.007 kb on - strand, within CA264_15285 at 3578.007 kb on - strand, within CA264_15285 at 3578.007 kb on - strand, within CA264_15285 at 3578.007 kb on - strand, within CA264_15285 at 3578.013 kb on - strand, within CA264_15285 at 3578.039 kb on + strand, within CA264_15285 at 3578.044 kb on - strand, within CA264_15285 at 3578.127 kb on - strand, within CA264_15285 at 3578.144 kb on + strand, within CA264_15285 at 3578.145 kb on - strand, within CA264_15285 at 3578.199 kb on - strand, within CA264_15285 at 3578.232 kb on + strand, within CA264_15285 at 3578.235 kb on - strand, within CA264_15285 at 3578.251 kb on + strand, within CA264_15285 at 3578.303 kb on - strand, within CA264_15285 at 3578.311 kb on - strand, within CA264_15285 at 3578.379 kb on - strand, within CA264_15285 at 3578.431 kb on + strand at 3578.431 kb on + strand at 3578.431 kb on + strand at 3578.432 kb on - strand at 3578.433 kb on + strand at 3578.434 kb on - strand at 3578.534 kb on + strand at 3578.535 kb on - strand at 3578.567 kb on + strand at 3578.567 kb on + strand at 3578.567 kb on + strand at 3578.568 kb on - strand at 3578.572 kb on + strand at 3578.572 kb on + strand at 3578.573 kb on - strand at 3578.631 kb on - strand at 3578.635 kb on - strand at 3578.672 kb on - strand, within CA264_15290 at 3578.672 kb on - strand, within CA264_15290 at 3578.672 kb on - strand, within CA264_15290 at 3578.679 kb on - strand, within CA264_15290 at 3578.730 kb on + strand, within CA264_15290 at 3578.730 kb on + strand, within CA264_15290 at 3578.730 kb on + strand, within CA264_15290 at 3578.730 kb on + strand, within CA264_15290 at 3578.731 kb on - strand, within CA264_15290 at 3578.731 kb on - strand, within CA264_15290 at 3578.734 kb on + strand, within CA264_15290 at 3578.735 kb on - strand, within CA264_15290 at 3578.741 kb on + strand, within CA264_15290 at 3578.795 kb on + strand, within CA264_15290 at 3578.795 kb on + strand, within CA264_15290 at 3578.836 kb on + strand, within CA264_15290 at 3578.863 kb on - strand, within CA264_15290 at 3578.942 kb on + strand, within CA264_15290 at 3578.949 kb on + strand, within CA264_15290 at 3578.955 kb on + strand, within CA264_15290 at 3578.975 kb on + strand, within CA264_15290 at 3579.014 kb on + strand, within CA264_15290 at 3579.014 kb on + strand, within CA264_15290 at 3579.014 kb on + strand, within CA264_15290 at 3579.015 kb on - strand, within CA264_15290 at 3579.015 kb on - strand, within CA264_15290 at 3579.020 kb on + strand, within CA264_15290 at 3579.108 kb on + strand, within CA264_15290 at 3579.108 kb on + strand, within CA264_15290 at 3579.108 kb on + strand, within CA264_15290 at 3579.109 kb on - strand, within CA264_15290 at 3579.109 kb on - strand, within CA264_15290 at 3579.110 kb on + strand, within CA264_15290 at 3579.110 kb on + strand, within CA264_15290 at 3579.111 kb on - strand, within CA264_15290 at 3579.159 kb on + strand, within CA264_15290 at 3579.161 kb on + strand, within CA264_15290 at 3579.181 kb on + strand, within CA264_15290 at 3579.183 kb on + strand, within CA264_15290 at 3579.183 kb on + strand, within CA264_15290 at 3579.184 kb on - strand, within CA264_15290 at 3579.239 kb on + strand, within CA264_15290 at 3579.239 kb on + strand, within CA264_15290 at 3579.293 kb on + strand at 3579.294 kb on + strand at 3579.294 kb on - strand at 3579.316 kb on - strand at 3579.329 kb on - strand at 3579.396 kb on + strand at 3579.424 kb on + strand at 3579.425 kb on - strand at 3579.436 kb on + strand at 3579.436 kb on + strand at 3579.436 kb on + strand at 3579.459 kb on - strand at 3579.467 kb on + strand at 3579.467 kb on + strand at 3579.468 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 3,576,585 - CA264_15280 0.16 -0.4 3,576,622 + CA264_15280 0.19 +0.8 3,576,684 - CA264_15280 0.25 -0.9 3,576,786 + CA264_15280 0.35 -0.6 3,576,845 - CA264_15280 0.41 -0.3 3,576,879 - CA264_15280 0.44 +0.1 3,576,879 - CA264_15280 0.44 -0.2 3,576,880 + CA264_15280 0.44 +0.2 3,576,892 + CA264_15280 0.46 -0.2 3,576,893 - CA264_15280 0.46 -0.1 3,576,893 - CA264_15280 0.46 -0.9 3,576,914 + CA264_15280 0.48 +1.0 3,576,914 + CA264_15280 0.48 +0.1 3,576,915 - CA264_15280 0.48 +0.1 3,576,965 - CA264_15280 0.53 +0.3 3,576,965 - CA264_15280 0.53 -0.9 3,577,094 + CA264_15280 0.65 +2.2 3,577,182 + CA264_15280 0.74 +0.1 3,577,183 - CA264_15280 0.74 -0.5 3,577,220 - CA264_15280 0.77 +0.9 3,577,229 - CA264_15280 0.78 -0.3 3,577,319 - CA264_15280 0.87 +0.1 3,577,319 - CA264_15280 0.87 +0.0 3,577,321 - CA264_15280 0.87 +0.3 3,577,323 + CA264_15280 0.87 +0.1 3,577,323 + CA264_15280 0.87 +2.3 3,577,324 - CA264_15280 0.88 -0.3 3,577,335 + CA264_15280 0.89 +0.1 3,577,382 - -3.3 3,577,382 - +0.4 3,577,388 + +0.4 3,577,388 + -0.6 3,577,388 + -0.1 3,577,439 + -0.6 3,577,444 + +0.1 3,577,444 + +0.1 3,577,444 + -0.3 3,577,461 + -0.0 3,577,462 - -0.4 3,577,478 + +0.2 3,577,479 - -0.4 3,577,519 - -0.3 3,577,624 - CA264_15285 0.16 -0.6 3,577,625 - CA264_15285 0.16 +1.3 3,577,625 - CA264_15285 0.16 +0.6 3,577,631 + CA264_15285 0.17 -0.1 3,577,632 - CA264_15285 0.17 +0.1 3,577,632 - CA264_15285 0.17 -0.3 3,577,726 - CA264_15285 0.26 -0.5 3,577,737 - CA264_15285 0.27 -0.1 3,577,737 - CA264_15285 0.27 -0.1 3,577,738 + CA264_15285 0.27 +0.6 3,577,739 - CA264_15285 0.27 -0.6 3,577,758 + CA264_15285 0.29 +1.6 3,577,758 + CA264_15285 0.29 +0.2 3,577,759 - CA264_15285 0.29 +1.7 3,577,826 + CA264_15285 0.35 +1.0 3,577,881 + CA264_15285 0.41 +0.1 3,577,883 + CA264_15285 0.41 -0.3 3,577,884 + CA264_15285 0.41 +0.9 3,577,885 - CA264_15285 0.41 -0.1 3,577,885 - CA264_15285 0.41 +0.2 3,577,885 - CA264_15285 0.41 +0.4 3,577,886 + CA264_15285 0.41 -0.4 3,577,886 + CA264_15285 0.41 +0.1 3,577,887 - CA264_15285 0.41 +1.7 3,577,887 - CA264_15285 0.41 -0.1 3,577,887 - CA264_15285 0.41 +1.2 3,577,887 - CA264_15285 0.41 +0.4 3,577,887 - CA264_15285 0.41 +0.5 3,577,939 - CA264_15285 0.46 +0.7 3,577,959 + CA264_15285 0.48 -0.2 3,577,982 + CA264_15285 0.50 +0.4 3,577,984 + CA264_15285 0.50 -2.1 3,577,985 - CA264_15285 0.51 -0.8 3,577,989 - CA264_15285 0.51 -0.7 3,577,989 - CA264_15285 0.51 +0.4 3,578,007 - CA264_15285 0.53 +0.4 3,578,007 - CA264_15285 0.53 -0.3 3,578,007 - CA264_15285 0.53 -0.2 3,578,007 - CA264_15285 0.53 -0.3 3,578,007 - CA264_15285 0.53 +1.5 3,578,013 - CA264_15285 0.53 -0.5 3,578,039 + CA264_15285 0.56 +0.1 3,578,044 - CA264_15285 0.56 -0.1 3,578,127 - CA264_15285 0.64 -1.3 3,578,144 + CA264_15285 0.66 +0.6 3,578,145 - CA264_15285 0.66 -0.3 3,578,199 - CA264_15285 0.71 +0.5 3,578,232 + CA264_15285 0.74 +2.1 3,578,235 - CA264_15285 0.74 +0.8 3,578,251 + CA264_15285 0.76 +0.5 3,578,303 - CA264_15285 0.81 +1.2 3,578,311 - CA264_15285 0.81 +0.2 3,578,379 - CA264_15285 0.88 -0.3 3,578,431 + +0.4 3,578,431 + -0.3 3,578,431 + -0.3 3,578,432 - +0.3 3,578,433 + -0.6 3,578,434 - -0.3 3,578,534 + +0.9 3,578,535 - -0.1 3,578,567 + +0.4 3,578,567 + -0.2 3,578,567 + +0.1 3,578,568 - -0.1 3,578,572 + -0.1 3,578,572 + +0.7 3,578,573 - -0.1 3,578,631 - -0.1 3,578,635 - +0.7 3,578,672 - CA264_15290 0.15 +0.3 3,578,672 - CA264_15290 0.15 +1.2 3,578,672 - CA264_15290 0.15 +0.3 3,578,679 - CA264_15290 0.15 +0.2 3,578,730 + CA264_15290 0.22 +0.1 3,578,730 + CA264_15290 0.22 +0.3 3,578,730 + CA264_15290 0.22 +0.7 3,578,730 + CA264_15290 0.22 -0.2 3,578,731 - CA264_15290 0.22 -1.2 3,578,731 - CA264_15290 0.22 -0.2 3,578,734 + CA264_15290 0.23 +1.3 3,578,735 - CA264_15290 0.23 -0.2 3,578,741 + CA264_15290 0.23 +0.2 3,578,795 + CA264_15290 0.30 +0.5 3,578,795 + CA264_15290 0.30 -2.5 3,578,836 + CA264_15290 0.36 +0.3 3,578,863 - CA264_15290 0.39 +0.2 3,578,942 + CA264_15290 0.50 -0.2 3,578,949 + CA264_15290 0.50 +0.3 3,578,955 + CA264_15290 0.51 +0.4 3,578,975 + CA264_15290 0.54 -0.8 3,579,014 + CA264_15290 0.59 -0.5 3,579,014 + CA264_15290 0.59 +0.1 3,579,014 + CA264_15290 0.59 -0.0 3,579,015 - CA264_15290 0.59 +0.5 3,579,015 - CA264_15290 0.59 +0.1 3,579,020 + CA264_15290 0.60 -0.5 3,579,108 + CA264_15290 0.71 +0.9 3,579,108 + CA264_15290 0.71 +0.2 3,579,108 + CA264_15290 0.71 -0.4 3,579,109 - CA264_15290 0.71 -0.1 3,579,109 - CA264_15290 0.71 +0.2 3,579,110 + CA264_15290 0.71 +0.1 3,579,110 + CA264_15290 0.71 -0.5 3,579,111 - CA264_15290 0.71 +1.5 3,579,159 + CA264_15290 0.78 +0.1 3,579,161 + CA264_15290 0.78 +0.7 3,579,181 + CA264_15290 0.81 +0.6 3,579,183 + CA264_15290 0.81 +0.2 3,579,183 + CA264_15290 0.81 +0.3 3,579,184 - CA264_15290 0.81 -0.3 3,579,239 + CA264_15290 0.88 -0.2 3,579,239 + CA264_15290 0.88 -0.4 3,579,293 + +1.5 3,579,294 + +0.1 3,579,294 - -0.5 3,579,316 - -0.7 3,579,329 - +0.7 3,579,396 + +0.3 3,579,424 + -0.9 3,579,425 - -0.1 3,579,436 + +1.7 3,579,436 + -0.5 3,579,436 + -0.5 3,579,459 - -0.4 3,579,467 + -1.3 3,579,467 + -0.4 3,579,468 - -0.9
Or see this region's nucleotide sequence