Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11210 and CA264_11215 are separated by 129 nucleotides CA264_11215 and CA264_11220 are separated by 58 nucleotides CA264_11220 and CA264_11225 are separated by 69 nucleotides
CA264_11210: CA264_11210 - ABC transporter ATP-binding protein, at 2,597,489 to 2,598,469
_11210
CA264_11215: CA264_11215 - N-acetyltransferase, at 2,598,599 to 2,599,147
_11215
CA264_11220: CA264_11220 - hypothetical protein, at 2,599,206 to 2,600,210
_11220
CA264_11225: CA264_11225 - alpha/beta hydrolase, at 2,600,280 to 2,601,704
_11225
Position (kb)
2599
2600
2601 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2598.288 kb on + strand, within CA264_11210 at 2598.288 kb on + strand, within CA264_11210 at 2598.290 kb on + strand, within CA264_11210 at 2598.291 kb on - strand, within CA264_11210 at 2598.524 kb on - strand at 2598.524 kb on - strand at 2598.524 kb on - strand at 2598.601 kb on - strand at 2598.630 kb on + strand at 2598.630 kb on + strand at 2598.853 kb on - strand, within CA264_11215 at 2598.857 kb on + strand, within CA264_11215 at 2598.858 kb on - strand, within CA264_11215 at 2598.858 kb on - strand, within CA264_11215 at 2598.899 kb on + strand, within CA264_11215 at 2598.899 kb on + strand, within CA264_11215 at 2598.900 kb on - strand, within CA264_11215 at 2598.900 kb on - strand, within CA264_11215 at 2599.059 kb on - strand, within CA264_11215 at 2599.100 kb on + strand at 2599.101 kb on - strand at 2599.198 kb on - strand at 2599.207 kb on + strand at 2599.224 kb on + strand at 2599.224 kb on + strand at 2599.232 kb on + strand at 2599.233 kb on - strand at 2599.310 kb on + strand, within CA264_11220 at 2599.310 kb on + strand, within CA264_11220 at 2599.311 kb on - strand, within CA264_11220 at 2599.320 kb on + strand, within CA264_11220 at 2599.353 kb on - strand, within CA264_11220 at 2599.354 kb on + strand, within CA264_11220 at 2599.392 kb on + strand, within CA264_11220 at 2599.475 kb on + strand, within CA264_11220 at 2599.475 kb on + strand, within CA264_11220 at 2599.476 kb on - strand, within CA264_11220 at 2599.560 kb on + strand, within CA264_11220 at 2599.568 kb on + strand, within CA264_11220 at 2599.568 kb on + strand, within CA264_11220 at 2599.594 kb on + strand, within CA264_11220 at 2599.671 kb on + strand, within CA264_11220 at 2599.874 kb on + strand, within CA264_11220 at 2599.912 kb on + strand, within CA264_11220 at 2599.936 kb on - strand, within CA264_11220 at 2600.027 kb on + strand, within CA264_11220 at 2600.054 kb on - strand, within CA264_11220 at 2600.055 kb on + strand, within CA264_11220 at 2600.056 kb on - strand, within CA264_11220 at 2600.081 kb on + strand, within CA264_11220 at 2600.121 kb on + strand at 2600.125 kb on + strand at 2600.125 kb on + strand at 2600.126 kb on - strand at 2600.152 kb on + strand at 2600.187 kb on - strand at 2600.196 kb on + strand at 2600.197 kb on - strand at 2600.218 kb on + strand at 2600.353 kb on + strand at 2600.394 kb on + strand at 2600.395 kb on - strand at 2600.397 kb on - strand at 2600.397 kb on - strand at 2600.397 kb on - strand at 2600.397 kb on - strand at 2600.433 kb on - strand, within CA264_11225 at 2600.499 kb on - strand, within CA264_11225 at 2600.613 kb on + strand, within CA264_11225 at 2600.640 kb on - strand, within CA264_11225 at 2600.652 kb on - strand, within CA264_11225 at 2600.664 kb on + strand, within CA264_11225 at 2600.665 kb on - strand, within CA264_11225 at 2600.669 kb on - strand, within CA264_11225 at 2600.705 kb on + strand, within CA264_11225 at 2600.733 kb on + strand, within CA264_11225 at 2600.792 kb on - strand, within CA264_11225 at 2600.861 kb on - strand, within CA264_11225 at 2600.881 kb on - strand, within CA264_11225 at 2600.903 kb on + strand, within CA264_11225 at 2600.903 kb on + strand, within CA264_11225 at 2600.903 kb on + strand, within CA264_11225 at 2600.904 kb on - strand, within CA264_11225 at 2600.959 kb on + strand, within CA264_11225 at 2600.959 kb on + strand, within CA264_11225 at 2600.959 kb on + strand, within CA264_11225 at 2600.960 kb on - strand, within CA264_11225 at 2600.963 kb on - strand, within CA264_11225 at 2600.964 kb on + strand, within CA264_11225 at 2600.965 kb on - strand, within CA264_11225 at 2601.031 kb on + strand, within CA264_11225 at 2601.032 kb on - strand, within CA264_11225 at 2601.057 kb on + strand, within CA264_11225 at 2601.094 kb on + strand, within CA264_11225 at 2601.094 kb on + strand, within CA264_11225 at 2601.094 kb on + strand, within CA264_11225 at 2601.094 kb on + strand, within CA264_11225 at 2601.095 kb on - strand, within CA264_11225 at 2601.144 kb on - strand, within CA264_11225 at 2601.146 kb on - strand, within CA264_11225 at 2601.163 kb on + strand, within CA264_11225 at 2601.170 kb on + strand, within CA264_11225 at 2601.175 kb on + strand, within CA264_11225 at 2601.176 kb on - strand, within CA264_11225
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 2,598,288 + CA264_11210 0.81 +0.0 2,598,288 + CA264_11210 0.81 -0.6 2,598,290 + CA264_11210 0.82 -0.6 2,598,291 - CA264_11210 0.82 -0.1 2,598,524 - -0.0 2,598,524 - -0.4 2,598,524 - +0.7 2,598,601 - +1.4 2,598,630 + +0.3 2,598,630 + -0.3 2,598,853 - CA264_11215 0.46 +0.4 2,598,857 + CA264_11215 0.47 -0.1 2,598,858 - CA264_11215 0.47 -0.5 2,598,858 - CA264_11215 0.47 +0.5 2,598,899 + CA264_11215 0.55 -0.6 2,598,899 + CA264_11215 0.55 -0.4 2,598,900 - CA264_11215 0.55 +1.4 2,598,900 - CA264_11215 0.55 -0.3 2,599,059 - CA264_11215 0.84 +0.6 2,599,100 + -0.8 2,599,101 - -1.0 2,599,198 - +1.6 2,599,207 + -0.1 2,599,224 + -0.2 2,599,224 + -0.0 2,599,232 + -0.7 2,599,233 - -0.5 2,599,310 + CA264_11220 0.10 -0.8 2,599,310 + CA264_11220 0.10 +0.1 2,599,311 - CA264_11220 0.10 +0.1 2,599,320 + CA264_11220 0.11 -1.0 2,599,353 - CA264_11220 0.15 +1.1 2,599,354 + CA264_11220 0.15 -1.4 2,599,392 + CA264_11220 0.19 -0.9 2,599,475 + CA264_11220 0.27 +0.4 2,599,475 + CA264_11220 0.27 -0.2 2,599,476 - CA264_11220 0.27 +0.4 2,599,560 + CA264_11220 0.35 -0.5 2,599,568 + CA264_11220 0.36 -1.1 2,599,568 + CA264_11220 0.36 +0.1 2,599,594 + CA264_11220 0.39 +1.2 2,599,671 + CA264_11220 0.46 -0.3 2,599,874 + CA264_11220 0.66 +0.6 2,599,912 + CA264_11220 0.70 -0.9 2,599,936 - CA264_11220 0.73 +0.4 2,600,027 + CA264_11220 0.82 +0.1 2,600,054 - CA264_11220 0.84 +0.3 2,600,055 + CA264_11220 0.84 -0.0 2,600,056 - CA264_11220 0.85 -0.1 2,600,081 + CA264_11220 0.87 +0.3 2,600,121 + -0.1 2,600,125 + -0.4 2,600,125 + -0.7 2,600,126 - -0.6 2,600,152 + +1.1 2,600,187 - -0.2 2,600,196 + -1.3 2,600,197 - +0.1 2,600,218 + -0.5 2,600,353 + +0.5 2,600,394 + +0.4 2,600,395 - +0.4 2,600,397 - -0.0 2,600,397 - -0.2 2,600,397 - +1.4 2,600,397 - -0.2 2,600,433 - CA264_11225 0.11 +0.9 2,600,499 - CA264_11225 0.15 -0.0 2,600,613 + CA264_11225 0.23 +0.6 2,600,640 - CA264_11225 0.25 +0.5 2,600,652 - CA264_11225 0.26 +2.4 2,600,664 + CA264_11225 0.27 -0.2 2,600,665 - CA264_11225 0.27 +0.1 2,600,669 - CA264_11225 0.27 +0.4 2,600,705 + CA264_11225 0.30 -0.1 2,600,733 + CA264_11225 0.32 +0.3 2,600,792 - CA264_11225 0.36 -0.1 2,600,861 - CA264_11225 0.41 +0.3 2,600,881 - CA264_11225 0.42 +1.8 2,600,903 + CA264_11225 0.44 +0.3 2,600,903 + CA264_11225 0.44 +0.7 2,600,903 + CA264_11225 0.44 +0.4 2,600,904 - CA264_11225 0.44 +0.5 2,600,959 + CA264_11225 0.48 +0.2 2,600,959 + CA264_11225 0.48 -2.1 2,600,959 + CA264_11225 0.48 -1.9 2,600,960 - CA264_11225 0.48 -0.6 2,600,963 - CA264_11225 0.48 -0.5 2,600,964 + CA264_11225 0.48 +1.9 2,600,965 - CA264_11225 0.48 -1.8 2,601,031 + CA264_11225 0.53 +0.2 2,601,032 - CA264_11225 0.53 -0.8 2,601,057 + CA264_11225 0.55 -0.2 2,601,094 + CA264_11225 0.57 -0.2 2,601,094 + CA264_11225 0.57 +0.5 2,601,094 + CA264_11225 0.57 -1.1 2,601,094 + CA264_11225 0.57 -1.4 2,601,095 - CA264_11225 0.57 +0.9 2,601,144 - CA264_11225 0.61 -0.8 2,601,146 - CA264_11225 0.61 -0.7 2,601,163 + CA264_11225 0.62 +0.4 2,601,170 + CA264_11225 0.62 -1.1 2,601,175 + CA264_11225 0.63 -2.1 2,601,176 - CA264_11225 0.63 -0.1
Or see this region's nucleotide sequence