Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08920 and CA264_08925 are separated by 237 nucleotides CA264_08925 and CA264_08930 are separated by 156 nucleotides
CA264_08920: CA264_08920 - phosphoserine phosphatase, at 2,084,047 to 2,084,667
_08920
CA264_08925: CA264_08925 - 23S rRNA pseudouridine synthase F, at 2,084,905 to 2,085,891
_08925
CA264_08930: CA264_08930 - hypothetical protein, at 2,086,048 to 2,087,070
_08930
Position (kb)
2084
2085
2086 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2083.984 kb on - strand at 2084.016 kb on + strand at 2084.044 kb on - strand at 2084.131 kb on + strand, within CA264_08920 at 2084.131 kb on + strand, within CA264_08920 at 2084.189 kb on - strand, within CA264_08920 at 2084.189 kb on - strand, within CA264_08920 at 2084.191 kb on + strand, within CA264_08920 at 2084.191 kb on + strand, within CA264_08920 at 2084.191 kb on + strand, within CA264_08920 at 2084.191 kb on + strand, within CA264_08920 at 2084.191 kb on + strand, within CA264_08920 at 2084.192 kb on - strand, within CA264_08920 at 2084.192 kb on - strand, within CA264_08920 at 2084.192 kb on - strand, within CA264_08920 at 2084.250 kb on + strand, within CA264_08920 at 2084.254 kb on + strand, within CA264_08920 at 2084.254 kb on + strand, within CA264_08920 at 2084.258 kb on + strand, within CA264_08920 at 2084.259 kb on - strand, within CA264_08920 at 2084.384 kb on + strand, within CA264_08920 at 2084.384 kb on + strand, within CA264_08920 at 2084.385 kb on - strand, within CA264_08920 at 2084.386 kb on + strand, within CA264_08920 at 2084.387 kb on - strand, within CA264_08920 at 2084.413 kb on + strand, within CA264_08920 at 2084.437 kb on + strand, within CA264_08920 at 2084.488 kb on + strand, within CA264_08920 at 2084.498 kb on + strand, within CA264_08920 at 2084.768 kb on - strand at 2084.776 kb on - strand at 2084.794 kb on + strand at 2084.922 kb on - strand at 2085.057 kb on - strand, within CA264_08925 at 2085.068 kb on + strand, within CA264_08925 at 2085.097 kb on + strand, within CA264_08925 at 2085.097 kb on + strand, within CA264_08925 at 2085.098 kb on - strand, within CA264_08925 at 2085.235 kb on - strand, within CA264_08925 at 2085.369 kb on - strand, within CA264_08925 at 2085.369 kb on - strand, within CA264_08925 at 2085.369 kb on - strand, within CA264_08925 at 2085.369 kb on - strand, within CA264_08925 at 2085.480 kb on - strand, within CA264_08925 at 2085.922 kb on + strand at 2085.943 kb on - strand at 2085.943 kb on - strand at 2085.943 kb on - strand at 2085.946 kb on + strand at 2086.013 kb on + strand at 2086.013 kb on + strand at 2086.016 kb on + strand at 2086.041 kb on + strand at 2086.068 kb on + strand at 2086.170 kb on - strand, within CA264_08930 at 2086.176 kb on - strand, within CA264_08930 at 2086.193 kb on + strand, within CA264_08930 at 2086.193 kb on + strand, within CA264_08930 at 2086.193 kb on + strand, within CA264_08930 at 2086.546 kb on - strand, within CA264_08930 at 2086.546 kb on - strand, within CA264_08930 at 2086.613 kb on + strand, within CA264_08930 at 2086.614 kb on - strand, within CA264_08930 at 2086.752 kb on + strand, within CA264_08930
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 2,083,984 - +0.9 2,084,016 + +1.4 2,084,044 - +0.1 2,084,131 + CA264_08920 0.14 -0.4 2,084,131 + CA264_08920 0.14 -0.8 2,084,189 - CA264_08920 0.23 +0.4 2,084,189 - CA264_08920 0.23 +0.1 2,084,191 + CA264_08920 0.23 -0.2 2,084,191 + CA264_08920 0.23 -0.4 2,084,191 + CA264_08920 0.23 -0.7 2,084,191 + CA264_08920 0.23 +0.0 2,084,191 + CA264_08920 0.23 -0.5 2,084,192 - CA264_08920 0.23 +1.2 2,084,192 - CA264_08920 0.23 -0.3 2,084,192 - CA264_08920 0.23 -0.4 2,084,250 + CA264_08920 0.33 -0.8 2,084,254 + CA264_08920 0.33 +0.1 2,084,254 + CA264_08920 0.33 +1.4 2,084,258 + CA264_08920 0.34 +0.1 2,084,259 - CA264_08920 0.34 +0.3 2,084,384 + CA264_08920 0.54 +2.1 2,084,384 + CA264_08920 0.54 +0.5 2,084,385 - CA264_08920 0.54 -0.0 2,084,386 + CA264_08920 0.55 -0.4 2,084,387 - CA264_08920 0.55 -0.2 2,084,413 + CA264_08920 0.59 +0.4 2,084,437 + CA264_08920 0.63 -0.2 2,084,488 + CA264_08920 0.71 -0.8 2,084,498 + CA264_08920 0.73 +0.8 2,084,768 - +0.4 2,084,776 - -0.4 2,084,794 + +1.1 2,084,922 - -0.0 2,085,057 - CA264_08925 0.15 -1.4 2,085,068 + CA264_08925 0.17 -0.5 2,085,097 + CA264_08925 0.19 +0.1 2,085,097 + CA264_08925 0.19 +0.0 2,085,098 - CA264_08925 0.20 -1.0 2,085,235 - CA264_08925 0.33 +0.5 2,085,369 - CA264_08925 0.47 -1.0 2,085,369 - CA264_08925 0.47 -1.2 2,085,369 - CA264_08925 0.47 -0.6 2,085,369 - CA264_08925 0.47 -0.2 2,085,480 - CA264_08925 0.58 -0.5 2,085,922 + +1.5 2,085,943 - -0.5 2,085,943 - +0.7 2,085,943 - +0.1 2,085,946 + -0.5 2,086,013 + -1.8 2,086,013 + +0.1 2,086,016 + -0.2 2,086,041 + +0.2 2,086,068 + -1.2 2,086,170 - CA264_08930 0.12 +0.1 2,086,176 - CA264_08930 0.13 -0.3 2,086,193 + CA264_08930 0.14 +0.0 2,086,193 + CA264_08930 0.14 -1.0 2,086,193 + CA264_08930 0.14 -0.0 2,086,546 - CA264_08930 0.49 +0.6 2,086,546 - CA264_08930 0.49 +1.1 2,086,613 + CA264_08930 0.55 -0.6 2,086,614 - CA264_08930 0.55 -1.8 2,086,752 + CA264_08930 0.69 +0.0
Or see this region's nucleotide sequence