Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07320 and CA264_07325 are separated by 73 nucleotides CA264_07325 and CA264_07330 are separated by 77 nucleotides CA264_07330 and CA264_07335 are separated by 32 nucleotides
CA264_07320: CA264_07320 - arsenical-resistance protein, at 1,691,477 to 1,692,559
_07320
CA264_07325: CA264_07325 - YfcE family phosphodiesterase, at 1,692,633 to 1,693,409
_07325
CA264_07330: CA264_07330 - hypothetical protein, at 1,693,487 to 1,694,017
_07330
CA264_07335: CA264_07335 - transcriptional regulator, at 1,694,050 to 1,694,391
_07335
Position (kb)
1692
1693
1694 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1691.656 kb on + strand, within CA264_07320 at 1691.754 kb on + strand, within CA264_07320 at 1691.754 kb on + strand, within CA264_07320 at 1691.755 kb on - strand, within CA264_07320 at 1691.755 kb on - strand, within CA264_07320 at 1691.796 kb on - strand, within CA264_07320 at 1691.796 kb on - strand, within CA264_07320 at 1691.796 kb on - strand, within CA264_07320 at 1691.801 kb on + strand, within CA264_07320 at 1691.801 kb on + strand, within CA264_07320 at 1691.802 kb on - strand, within CA264_07320 at 1691.802 kb on - strand, within CA264_07320 at 1691.825 kb on - strand, within CA264_07320 at 1691.863 kb on + strand, within CA264_07320 at 1691.960 kb on + strand, within CA264_07320 at 1691.962 kb on + strand, within CA264_07320 at 1691.963 kb on - strand, within CA264_07320 at 1691.966 kb on + strand, within CA264_07320 at 1691.966 kb on + strand, within CA264_07320 at 1691.966 kb on + strand, within CA264_07320 at 1691.966 kb on + strand, within CA264_07320 at 1691.966 kb on + strand, within CA264_07320 at 1691.966 kb on + strand, within CA264_07320 at 1691.967 kb on - strand, within CA264_07320 at 1691.967 kb on - strand, within CA264_07320 at 1691.967 kb on - strand, within CA264_07320 at 1691.967 kb on - strand, within CA264_07320 at 1691.967 kb on - strand, within CA264_07320 at 1691.970 kb on + strand, within CA264_07320 at 1691.970 kb on + strand, within CA264_07320 at 1691.971 kb on - strand, within CA264_07320 at 1691.971 kb on - strand, within CA264_07320 at 1692.011 kb on + strand, within CA264_07320 at 1692.027 kb on - strand, within CA264_07320 at 1692.029 kb on - strand, within CA264_07320 at 1692.029 kb on - strand, within CA264_07320 at 1692.036 kb on + strand, within CA264_07320 at 1692.055 kb on + strand, within CA264_07320 at 1692.063 kb on + strand, within CA264_07320 at 1692.063 kb on + strand, within CA264_07320 at 1692.064 kb on - strand, within CA264_07320 at 1692.069 kb on + strand, within CA264_07320 at 1692.069 kb on + strand, within CA264_07320 at 1692.070 kb on - strand, within CA264_07320 at 1692.078 kb on + strand, within CA264_07320 at 1692.126 kb on + strand, within CA264_07320 at 1692.201 kb on - strand, within CA264_07320 at 1692.213 kb on + strand, within CA264_07320 at 1692.214 kb on - strand, within CA264_07320 at 1692.363 kb on + strand, within CA264_07320 at 1692.363 kb on + strand, within CA264_07320 at 1692.395 kb on + strand, within CA264_07320 at 1692.453 kb on + strand at 1692.505 kb on - strand at 1692.537 kb on + strand at 1692.538 kb on - strand at 1692.542 kb on - strand at 1692.567 kb on + strand at 1692.637 kb on + strand at 1692.637 kb on + strand at 1692.638 kb on - strand at 1692.716 kb on - strand, within CA264_07325 at 1692.726 kb on + strand, within CA264_07325 at 1692.728 kb on + strand, within CA264_07325 at 1692.729 kb on - strand, within CA264_07325 at 1692.741 kb on + strand, within CA264_07325 at 1692.794 kb on - strand, within CA264_07325 at 1692.818 kb on + strand, within CA264_07325 at 1692.818 kb on + strand, within CA264_07325 at 1692.855 kb on - strand, within CA264_07325 at 1692.855 kb on - strand, within CA264_07325 at 1692.855 kb on - strand, within CA264_07325 at 1692.856 kb on + strand, within CA264_07325 at 1692.991 kb on + strand, within CA264_07325 at 1693.222 kb on + strand, within CA264_07325 at 1693.223 kb on - strand, within CA264_07325 at 1693.226 kb on + strand, within CA264_07325 at 1693.292 kb on - strand, within CA264_07325 at 1693.316 kb on - strand, within CA264_07325 at 1693.316 kb on - strand, within CA264_07325 at 1693.316 kb on - strand, within CA264_07325 at 1693.371 kb on + strand at 1693.427 kb on - strand at 1693.549 kb on + strand, within CA264_07330 at 1693.549 kb on + strand, within CA264_07330 at 1693.550 kb on - strand, within CA264_07330 at 1693.550 kb on - strand, within CA264_07330 at 1693.589 kb on - strand, within CA264_07330 at 1693.653 kb on + strand, within CA264_07330 at 1693.653 kb on + strand, within CA264_07330 at 1693.654 kb on - strand, within CA264_07330 at 1693.654 kb on - strand, within CA264_07330 at 1693.654 kb on - strand, within CA264_07330 at 1693.654 kb on - strand, within CA264_07330 at 1693.657 kb on - strand, within CA264_07330 at 1693.657 kb on - strand, within CA264_07330 at 1693.658 kb on + strand, within CA264_07330 at 1693.658 kb on + strand, within CA264_07330 at 1693.658 kb on + strand, within CA264_07330 at 1693.659 kb on - strand, within CA264_07330 at 1693.659 kb on - strand, within CA264_07330 at 1693.730 kb on + strand, within CA264_07330 at 1693.731 kb on - strand, within CA264_07330 at 1693.731 kb on - strand, within CA264_07330 at 1693.802 kb on + strand, within CA264_07330 at 1693.862 kb on + strand, within CA264_07330 at 1693.863 kb on - strand, within CA264_07330 at 1693.891 kb on - strand, within CA264_07330 at 1694.046 kb on - strand at 1694.111 kb on - strand, within CA264_07335 at 1694.150 kb on + strand, within CA264_07335 at 1694.151 kb on - strand, within CA264_07335 at 1694.151 kb on - strand, within CA264_07335 at 1694.170 kb on + strand, within CA264_07335 at 1694.199 kb on + strand, within CA264_07335 at 1694.200 kb on - strand, within CA264_07335 at 1694.200 kb on - strand, within CA264_07335 at 1694.382 kb on + strand at 1694.383 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 1,691,656 + CA264_07320 0.17 +0.1 1,691,754 + CA264_07320 0.26 +0.3 1,691,754 + CA264_07320 0.26 -0.4 1,691,755 - CA264_07320 0.26 +0.8 1,691,755 - CA264_07320 0.26 -0.8 1,691,796 - CA264_07320 0.29 -0.3 1,691,796 - CA264_07320 0.29 +1.1 1,691,796 - CA264_07320 0.29 -0.6 1,691,801 + CA264_07320 0.30 -0.9 1,691,801 + CA264_07320 0.30 -1.4 1,691,802 - CA264_07320 0.30 -0.7 1,691,802 - CA264_07320 0.30 +0.1 1,691,825 - CA264_07320 0.32 -1.5 1,691,863 + CA264_07320 0.36 +0.2 1,691,960 + CA264_07320 0.45 -0.6 1,691,962 + CA264_07320 0.45 -1.0 1,691,963 - CA264_07320 0.45 -0.3 1,691,966 + CA264_07320 0.45 +1.8 1,691,966 + CA264_07320 0.45 -0.8 1,691,966 + CA264_07320 0.45 -0.5 1,691,966 + CA264_07320 0.45 +0.9 1,691,966 + CA264_07320 0.45 +0.0 1,691,966 + CA264_07320 0.45 -0.3 1,691,967 - CA264_07320 0.45 -0.6 1,691,967 - CA264_07320 0.45 +3.0 1,691,967 - CA264_07320 0.45 -0.4 1,691,967 - CA264_07320 0.45 -0.3 1,691,967 - CA264_07320 0.45 -0.1 1,691,970 + CA264_07320 0.46 +0.7 1,691,970 + CA264_07320 0.46 -0.4 1,691,971 - CA264_07320 0.46 -0.1 1,691,971 - CA264_07320 0.46 -0.1 1,692,011 + CA264_07320 0.49 -0.3 1,692,027 - CA264_07320 0.51 -0.0 1,692,029 - CA264_07320 0.51 -0.2 1,692,029 - CA264_07320 0.51 -0.1 1,692,036 + CA264_07320 0.52 +0.6 1,692,055 + CA264_07320 0.53 -1.1 1,692,063 + CA264_07320 0.54 -0.4 1,692,063 + CA264_07320 0.54 -0.4 1,692,064 - CA264_07320 0.54 +0.1 1,692,069 + CA264_07320 0.55 -0.4 1,692,069 + CA264_07320 0.55 -0.9 1,692,070 - CA264_07320 0.55 +0.3 1,692,078 + CA264_07320 0.55 +1.2 1,692,126 + CA264_07320 0.60 -0.3 1,692,201 - CA264_07320 0.67 -1.1 1,692,213 + CA264_07320 0.68 -2.2 1,692,214 - CA264_07320 0.68 -0.2 1,692,363 + CA264_07320 0.82 -0.2 1,692,363 + CA264_07320 0.82 +0.1 1,692,395 + CA264_07320 0.85 -0.3 1,692,453 + -0.0 1,692,505 - -0.4 1,692,537 + -0.8 1,692,538 - -0.8 1,692,542 - +0.8 1,692,567 + -0.1 1,692,637 + +0.5 1,692,637 + -0.1 1,692,638 - +0.2 1,692,716 - CA264_07325 0.11 +0.7 1,692,726 + CA264_07325 0.12 -1.2 1,692,728 + CA264_07325 0.12 +0.3 1,692,729 - CA264_07325 0.12 -0.1 1,692,741 + CA264_07325 0.14 -0.5 1,692,794 - CA264_07325 0.21 -0.3 1,692,818 + CA264_07325 0.24 +0.1 1,692,818 + CA264_07325 0.24 -0.1 1,692,855 - CA264_07325 0.29 +0.1 1,692,855 - CA264_07325 0.29 -0.1 1,692,855 - CA264_07325 0.29 -0.5 1,692,856 + CA264_07325 0.29 -1.4 1,692,991 + CA264_07325 0.46 -0.2 1,693,222 + CA264_07325 0.76 -0.4 1,693,223 - CA264_07325 0.76 -0.8 1,693,226 + CA264_07325 0.76 +0.3 1,693,292 - CA264_07325 0.85 +0.3 1,693,316 - CA264_07325 0.88 -0.4 1,693,316 - CA264_07325 0.88 +0.3 1,693,316 - CA264_07325 0.88 +0.8 1,693,371 + -0.4 1,693,427 - +0.0 1,693,549 + CA264_07330 0.12 +0.1 1,693,549 + CA264_07330 0.12 -0.1 1,693,550 - CA264_07330 0.12 +0.2 1,693,550 - CA264_07330 0.12 -0.1 1,693,589 - CA264_07330 0.19 -0.4 1,693,653 + CA264_07330 0.31 +0.1 1,693,653 + CA264_07330 0.31 +0.5 1,693,654 - CA264_07330 0.31 -0.4 1,693,654 - CA264_07330 0.31 -0.7 1,693,654 - CA264_07330 0.31 +0.5 1,693,654 - CA264_07330 0.31 -0.2 1,693,657 - CA264_07330 0.32 +0.6 1,693,657 - CA264_07330 0.32 -0.4 1,693,658 + CA264_07330 0.32 +0.3 1,693,658 + CA264_07330 0.32 -0.9 1,693,658 + CA264_07330 0.32 -0.9 1,693,659 - CA264_07330 0.32 -1.1 1,693,659 - CA264_07330 0.32 -2.0 1,693,730 + CA264_07330 0.46 -1.2 1,693,731 - CA264_07330 0.46 -0.5 1,693,731 - CA264_07330 0.46 -0.1 1,693,802 + CA264_07330 0.59 -0.8 1,693,862 + CA264_07330 0.71 +0.4 1,693,863 - CA264_07330 0.71 -0.7 1,693,891 - CA264_07330 0.76 +0.5 1,694,046 - +0.6 1,694,111 - CA264_07335 0.18 -0.2 1,694,150 + CA264_07335 0.29 +0.4 1,694,151 - CA264_07335 0.30 -0.5 1,694,151 - CA264_07335 0.30 -0.1 1,694,170 + CA264_07335 0.35 -0.9 1,694,199 + CA264_07335 0.44 +0.2 1,694,200 - CA264_07335 0.44 -0.2 1,694,200 - CA264_07335 0.44 +0.1 1,694,382 + -0.2 1,694,383 - -0.1
Or see this region's nucleotide sequence