Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07175 and CA264_07180 are separated by 14 nucleotides CA264_07180 and CA264_07185 overlap by 8 nucleotides CA264_07185 and CA264_07190 are separated by 292 nucleotides
CA264_07175: CA264_07175 - secretion protein HlyD, at 1,658,407 to 1,659,453
_07175
CA264_07180: CA264_07180 - transporter, at 1,659,468 to 1,660,811
_07180
CA264_07185: CA264_07185 - TetR family transcriptional regulator, at 1,660,804 to 1,661,439
_07185
CA264_07190: CA264_07190 - hypothetical protein, at 1,661,732 to 1,662,331
_07190
Position (kb)
1659
1660
1661 Strain fitness (log2 ratio)
-1
0
1
2 at 1658.513 kb on - strand, within CA264_07175 at 1658.513 kb on - strand, within CA264_07175 at 1658.591 kb on + strand, within CA264_07175 at 1658.605 kb on + strand, within CA264_07175 at 1658.605 kb on + strand, within CA264_07175 at 1658.695 kb on + strand, within CA264_07175 at 1658.696 kb on - strand, within CA264_07175 at 1658.699 kb on + strand, within CA264_07175 at 1658.813 kb on + strand, within CA264_07175 at 1658.874 kb on + strand, within CA264_07175 at 1658.946 kb on - strand, within CA264_07175 at 1659.000 kb on + strand, within CA264_07175 at 1659.000 kb on + strand, within CA264_07175 at 1659.003 kb on + strand, within CA264_07175 at 1659.004 kb on - strand, within CA264_07175 at 1659.036 kb on + strand, within CA264_07175 at 1659.065 kb on - strand, within CA264_07175 at 1659.065 kb on - strand, within CA264_07175 at 1659.136 kb on + strand, within CA264_07175 at 1659.190 kb on + strand, within CA264_07175 at 1659.268 kb on - strand, within CA264_07175 at 1659.268 kb on - strand, within CA264_07175 at 1659.268 kb on - strand, within CA264_07175 at 1659.354 kb on - strand at 1659.359 kb on + strand at 1659.359 kb on + strand at 1659.391 kb on + strand at 1659.394 kb on - strand at 1659.439 kb on - strand at 1659.469 kb on + strand at 1659.473 kb on + strand at 1659.474 kb on - strand at 1659.477 kb on + strand at 1659.503 kb on + strand at 1659.503 kb on + strand at 1659.505 kb on + strand at 1659.508 kb on + strand at 1659.509 kb on - strand at 1659.707 kb on - strand, within CA264_07180 at 1659.756 kb on - strand, within CA264_07180 at 1659.865 kb on + strand, within CA264_07180 at 1659.866 kb on - strand, within CA264_07180 at 1659.903 kb on + strand, within CA264_07180 at 1659.908 kb on - strand, within CA264_07180 at 1659.963 kb on + strand, within CA264_07180 at 1660.005 kb on + strand, within CA264_07180 at 1660.020 kb on + strand, within CA264_07180 at 1660.021 kb on - strand, within CA264_07180 at 1660.039 kb on + strand, within CA264_07180 at 1660.228 kb on - strand, within CA264_07180 at 1660.228 kb on - strand, within CA264_07180 at 1660.324 kb on + strand, within CA264_07180 at 1660.352 kb on + strand, within CA264_07180 at 1660.382 kb on + strand, within CA264_07180 at 1660.507 kb on + strand, within CA264_07180 at 1660.510 kb on + strand, within CA264_07180 at 1660.510 kb on + strand, within CA264_07180 at 1660.510 kb on + strand, within CA264_07180 at 1660.511 kb on - strand, within CA264_07180 at 1660.542 kb on - strand, within CA264_07180 at 1660.568 kb on - strand, within CA264_07180 at 1660.571 kb on + strand, within CA264_07180 at 1660.571 kb on + strand, within CA264_07180 at 1660.572 kb on - strand, within CA264_07180 at 1660.572 kb on - strand, within CA264_07180 at 1660.573 kb on + strand, within CA264_07180 at 1660.806 kb on - strand at 1660.826 kb on - strand at 1660.836 kb on + strand at 1660.851 kb on + strand at 1660.955 kb on + strand, within CA264_07185 at 1660.969 kb on + strand, within CA264_07185 at 1660.996 kb on + strand, within CA264_07185 at 1660.996 kb on + strand, within CA264_07185 at 1661.004 kb on + strand, within CA264_07185 at 1661.080 kb on - strand, within CA264_07185 at 1661.081 kb on + strand, within CA264_07185 at 1661.081 kb on + strand, within CA264_07185 at 1661.082 kb on - strand, within CA264_07185 at 1661.133 kb on + strand, within CA264_07185 at 1661.168 kb on + strand, within CA264_07185 at 1661.169 kb on - strand, within CA264_07185 at 1661.169 kb on - strand, within CA264_07185 at 1661.169 kb on - strand, within CA264_07185 at 1661.301 kb on - strand, within CA264_07185 at 1661.307 kb on + strand, within CA264_07185 at 1661.307 kb on + strand, within CA264_07185 at 1661.307 kb on + strand, within CA264_07185 at 1661.307 kb on + strand, within CA264_07185 at 1661.308 kb on - strand, within CA264_07185 at 1661.500 kb on + strand at 1661.583 kb on + strand at 1661.594 kb on + strand at 1661.594 kb on + strand at 1661.594 kb on + strand at 1661.594 kb on + strand at 1661.658 kb on - strand at 1661.665 kb on + strand at 1661.672 kb on - strand at 1661.682 kb on + strand at 1661.739 kb on + strand at 1661.756 kb on + strand at 1661.756 kb on + strand at 1661.783 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 1,658,513 - CA264_07175 0.10 -0.3 1,658,513 - CA264_07175 0.10 -0.4 1,658,591 + CA264_07175 0.18 +0.3 1,658,605 + CA264_07175 0.19 +1.2 1,658,605 + CA264_07175 0.19 -0.8 1,658,695 + CA264_07175 0.28 +0.4 1,658,696 - CA264_07175 0.28 +0.0 1,658,699 + CA264_07175 0.28 -0.1 1,658,813 + CA264_07175 0.39 -0.3 1,658,874 + CA264_07175 0.45 -0.5 1,658,946 - CA264_07175 0.51 +0.1 1,659,000 + CA264_07175 0.57 -0.7 1,659,000 + CA264_07175 0.57 +0.5 1,659,003 + CA264_07175 0.57 -0.1 1,659,004 - CA264_07175 0.57 +0.3 1,659,036 + CA264_07175 0.60 -0.3 1,659,065 - CA264_07175 0.63 +0.0 1,659,065 - CA264_07175 0.63 -0.6 1,659,136 + CA264_07175 0.70 +0.2 1,659,190 + CA264_07175 0.75 -0.3 1,659,268 - CA264_07175 0.82 -0.7 1,659,268 - CA264_07175 0.82 -0.2 1,659,268 - CA264_07175 0.82 +0.3 1,659,354 - +0.1 1,659,359 + +0.1 1,659,359 + -0.5 1,659,391 + -0.1 1,659,394 - -0.1 1,659,439 - +0.9 1,659,469 + -0.4 1,659,473 + +0.3 1,659,474 - -0.4 1,659,477 + -0.2 1,659,503 + -0.2 1,659,503 + -0.1 1,659,505 + -0.5 1,659,508 + +1.2 1,659,509 - -0.0 1,659,707 - CA264_07180 0.18 -0.9 1,659,756 - CA264_07180 0.21 +0.6 1,659,865 + CA264_07180 0.30 -0.3 1,659,866 - CA264_07180 0.30 -0.3 1,659,903 + CA264_07180 0.32 +0.6 1,659,908 - CA264_07180 0.33 +0.2 1,659,963 + CA264_07180 0.37 -0.0 1,660,005 + CA264_07180 0.40 -0.3 1,660,020 + CA264_07180 0.41 -0.4 1,660,021 - CA264_07180 0.41 -0.3 1,660,039 + CA264_07180 0.42 +0.3 1,660,228 - CA264_07180 0.57 +0.1 1,660,228 - CA264_07180 0.57 -0.4 1,660,324 + CA264_07180 0.64 +0.6 1,660,352 + CA264_07180 0.66 -0.4 1,660,382 + CA264_07180 0.68 +0.3 1,660,507 + CA264_07180 0.77 -0.1 1,660,510 + CA264_07180 0.78 +0.6 1,660,510 + CA264_07180 0.78 -0.7 1,660,510 + CA264_07180 0.78 +0.8 1,660,511 - CA264_07180 0.78 +0.3 1,660,542 - CA264_07180 0.80 -0.9 1,660,568 - CA264_07180 0.82 -1.3 1,660,571 + CA264_07180 0.82 +2.4 1,660,571 + CA264_07180 0.82 -1.2 1,660,572 - CA264_07180 0.82 +0.1 1,660,572 - CA264_07180 0.82 -0.2 1,660,573 + CA264_07180 0.82 -1.1 1,660,806 - -0.6 1,660,826 - -0.3 1,660,836 + -0.1 1,660,851 + +1.9 1,660,955 + CA264_07185 0.24 -0.1 1,660,969 + CA264_07185 0.26 -0.3 1,660,996 + CA264_07185 0.30 +0.5 1,660,996 + CA264_07185 0.30 -0.3 1,661,004 + CA264_07185 0.31 -0.2 1,661,080 - CA264_07185 0.43 -0.9 1,661,081 + CA264_07185 0.44 +0.9 1,661,081 + CA264_07185 0.44 -0.9 1,661,082 - CA264_07185 0.44 -1.0 1,661,133 + CA264_07185 0.52 +0.5 1,661,168 + CA264_07185 0.57 +0.1 1,661,169 - CA264_07185 0.57 -0.4 1,661,169 - CA264_07185 0.57 -0.3 1,661,169 - CA264_07185 0.57 -0.7 1,661,301 - CA264_07185 0.78 +0.6 1,661,307 + CA264_07185 0.79 -1.1 1,661,307 + CA264_07185 0.79 +1.0 1,661,307 + CA264_07185 0.79 +0.5 1,661,307 + CA264_07185 0.79 +0.2 1,661,308 - CA264_07185 0.79 -0.4 1,661,500 + -0.4 1,661,583 + -0.9 1,661,594 + +0.4 1,661,594 + -0.1 1,661,594 + +0.2 1,661,594 + -0.2 1,661,658 - -0.4 1,661,665 + +0.5 1,661,672 - -0.6 1,661,682 + -0.2 1,661,739 + +1.3 1,661,756 + +0.2 1,661,756 + +0.1 1,661,783 - -1.7
Or see this region's nucleotide sequence