Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_02995

Experiment: m.b. perchlorate 100 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_02985 and CA264_02990 are separated by 85 nucleotidesCA264_02990 and CA264_02995 are separated by 13 nucleotidesCA264_02995 and CA264_03000 are separated by 21 nucleotides CA264_02985: CA264_02985 - NAD(P)-dependent oxidoreductase, at 684,429 to 685,790 _02985 CA264_02990: CA264_02990 - hypothetical protein, at 685,876 to 686,649 _02990 CA264_02995: CA264_02995 - hypothetical protein, at 686,663 to 687,877 _02995 CA264_03000: CA264_03000 - hypothetical protein, at 687,899 to 689,131 _03000 Position (kb) 686 687 688Strain fitness (log2 ratio) -2 -1 0 1 2 3at 685.844 kb on + strandat 686.021 kb on - strand, within CA264_02990at 686.104 kb on + strand, within CA264_02990at 686.104 kb on + strand, within CA264_02990at 686.140 kb on + strand, within CA264_02990at 686.140 kb on + strand, within CA264_02990at 686.141 kb on - strand, within CA264_02990at 686.141 kb on - strand, within CA264_02990at 686.194 kb on - strand, within CA264_02990at 686.194 kb on - strand, within CA264_02990at 686.330 kb on - strand, within CA264_02990at 686.376 kb on - strand, within CA264_02990at 686.384 kb on + strand, within CA264_02990at 686.385 kb on - strand, within CA264_02990at 686.385 kb on - strand, within CA264_02990at 686.385 kb on - strand, within CA264_02990at 686.417 kb on - strand, within CA264_02990at 686.460 kb on + strand, within CA264_02990at 686.471 kb on - strand, within CA264_02990at 686.497 kb on + strand, within CA264_02990at 686.499 kb on + strand, within CA264_02990at 686.516 kb on + strand, within CA264_02990at 686.517 kb on - strand, within CA264_02990at 686.562 kb on - strand, within CA264_02990at 686.573 kb on + strandat 686.574 kb on - strandat 686.658 kb on + strandat 686.659 kb on - strandat 686.659 kb on - strandat 686.670 kb on + strandat 686.670 kb on + strandat 686.670 kb on + strandat 686.671 kb on - strandat 686.690 kb on + strandat 686.793 kb on + strand, within CA264_02995at 686.794 kb on - strand, within CA264_02995at 686.838 kb on - strand, within CA264_02995at 686.843 kb on + strand, within CA264_02995at 686.844 kb on - strand, within CA264_02995at 686.846 kb on - strand, within CA264_02995at 686.925 kb on + strand, within CA264_02995at 686.959 kb on + strand, within CA264_02995at 686.990 kb on + strand, within CA264_02995at 686.998 kb on + strand, within CA264_02995at 686.999 kb on - strand, within CA264_02995at 687.145 kb on + strand, within CA264_02995at 687.145 kb on + strand, within CA264_02995at 687.403 kb on - strand, within CA264_02995at 687.568 kb on - strand, within CA264_02995at 687.688 kb on + strand, within CA264_02995at 687.689 kb on - strand, within CA264_02995at 687.693 kb on + strand, within CA264_02995at 687.694 kb on - strand, within CA264_02995at 687.719 kb on + strand, within CA264_02995at 687.768 kb on - strandat 687.785 kb on + strandat 687.785 kb on + strandat 687.786 kb on - strandat 687.853 kb on + strandat 687.853 kb on + strandat 687.876 kb on - strandat 687.876 kb on - strandat 687.876 kb on - strandat 687.880 kb on - strandat 687.880 kb on - strandat 687.880 kb on - strandat 687.900 kb on + strandat 687.901 kb on - strandat 687.905 kb on + strandat 687.906 kb on - strandat 688.041 kb on + strand, within CA264_03000at 688.041 kb on + strand, within CA264_03000at 688.041 kb on + strand, within CA264_03000at 688.041 kb on + strand, within CA264_03000at 688.041 kb on + strand, within CA264_03000at 688.041 kb on + strand, within CA264_03000at 688.042 kb on - strand, within CA264_03000at 688.042 kb on - strand, within CA264_03000at 688.077 kb on + strand, within CA264_03000at 688.181 kb on + strand, within CA264_03000at 688.206 kb on - strand, within CA264_03000at 688.217 kb on + strand, within CA264_03000at 688.220 kb on - strand, within CA264_03000at 688.223 kb on + strand, within CA264_03000at 688.224 kb on - strand, within CA264_03000at 688.235 kb on + strand, within CA264_03000at 688.235 kb on + strand, within CA264_03000at 688.292 kb on + strand, within CA264_03000at 688.326 kb on + strand, within CA264_03000at 688.327 kb on - strand, within CA264_03000at 688.327 kb on - strand, within CA264_03000at 688.396 kb on + strand, within CA264_03000at 688.456 kb on + strand, within CA264_03000at 688.456 kb on + strand, within CA264_03000at 688.457 kb on - strand, within CA264_03000at 688.457 kb on - strand, within CA264_03000at 688.459 kb on + strand, within CA264_03000at 688.459 kb on + strand, within CA264_03000at 688.460 kb on - strand, within CA264_03000at 688.499 kb on - strand, within CA264_03000at 688.569 kb on + strand, within CA264_03000at 688.569 kb on + strand, within CA264_03000at 688.580 kb on + strand, within CA264_03000at 688.586 kb on - strand, within CA264_03000at 688.701 kb on + strand, within CA264_03000at 688.701 kb on + strand, within CA264_03000at 688.701 kb on + strand, within CA264_03000at 688.701 kb on + strand, within CA264_03000at 688.702 kb on - strand, within CA264_03000at 688.702 kb on - strand, within CA264_03000at 688.702 kb on - strand, within CA264_03000at 688.702 kb on - strand, within CA264_03000at 688.704 kb on - strand, within CA264_03000at 688.723 kb on - strand, within CA264_03000at 688.737 kb on - strand, within CA264_03000at 688.737 kb on - strand, within CA264_03000at 688.737 kb on - strand, within CA264_03000at 688.871 kb on + strand, within CA264_03000at 688.871 kb on + strand, within CA264_03000

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM
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685,844 + -0.6
686,021 - CA264_02990 0.19 +0.3
686,104 + CA264_02990 0.29 -0.0
686,104 + CA264_02990 0.29 -0.6
686,140 + CA264_02990 0.34 +0.3
686,140 + CA264_02990 0.34 -0.5
686,141 - CA264_02990 0.34 -1.4
686,141 - CA264_02990 0.34 -1.4
686,194 - CA264_02990 0.41 +2.2
686,194 - CA264_02990 0.41 +0.3
686,330 - CA264_02990 0.59 -1.1
686,376 - CA264_02990 0.65 -0.2
686,384 + CA264_02990 0.66 +0.9
686,385 - CA264_02990 0.66 -0.1
686,385 - CA264_02990 0.66 +0.4
686,385 - CA264_02990 0.66 +1.0
686,417 - CA264_02990 0.70 -0.1
686,460 + CA264_02990 0.75 -0.2
686,471 - CA264_02990 0.77 -0.0
686,497 + CA264_02990 0.80 +1.9
686,499 + CA264_02990 0.80 -0.4
686,516 + CA264_02990 0.83 +1.2
686,517 - CA264_02990 0.83 -0.6
686,562 - CA264_02990 0.89 -0.1
686,573 + -0.3
686,574 - -0.8
686,658 + -0.3
686,659 - -0.0
686,659 - +0.1
686,670 + -0.4
686,670 + -0.6
686,670 + -0.0
686,671 - +0.2
686,690 + +0.1
686,793 + CA264_02995 0.11 +0.4
686,794 - CA264_02995 0.11 +1.0
686,838 - CA264_02995 0.14 -0.5
686,843 + CA264_02995 0.15 -0.2
686,844 - CA264_02995 0.15 +0.6
686,846 - CA264_02995 0.15 -0.5
686,925 + CA264_02995 0.22 -0.5
686,959 + CA264_02995 0.24 -1.4
686,990 + CA264_02995 0.27 -0.5
686,998 + CA264_02995 0.28 +0.0
686,999 - CA264_02995 0.28 -0.0
687,145 + CA264_02995 0.40 -0.5
687,145 + CA264_02995 0.40 -0.0
687,403 - CA264_02995 0.61 +1.3
687,568 - CA264_02995 0.74 -0.2
687,688 + CA264_02995 0.84 +1.0
687,689 - CA264_02995 0.84 +0.7
687,693 + CA264_02995 0.85 -0.2
687,694 - CA264_02995 0.85 +1.0
687,719 + CA264_02995 0.87 -1.0
687,768 - -1.3
687,785 + -0.6
687,785 + +0.4
687,786 - -1.9
687,853 + +0.3
687,853 + -0.5
687,876 - -0.4
687,876 - -0.8
687,876 - -0.2
687,880 - +0.0
687,880 - +3.0
687,880 - +1.2
687,900 + +1.4
687,901 - -0.5
687,905 + -0.2
687,906 - +0.2
688,041 + CA264_03000 0.12 +2.2
688,041 + CA264_03000 0.12 -0.9
688,041 + CA264_03000 0.12 -0.2
688,041 + CA264_03000 0.12 -0.2
688,041 + CA264_03000 0.12 -0.1
688,041 + CA264_03000 0.12 +0.1
688,042 - CA264_03000 0.12 -0.2
688,042 - CA264_03000 0.12 -0.4
688,077 + CA264_03000 0.14 +0.0
688,181 + CA264_03000 0.23 +0.4
688,206 - CA264_03000 0.25 +1.0
688,217 + CA264_03000 0.26 -0.9
688,220 - CA264_03000 0.26 +0.4
688,223 + CA264_03000 0.26 -1.3
688,224 - CA264_03000 0.26 +0.8
688,235 + CA264_03000 0.27 -0.9
688,235 + CA264_03000 0.27 +0.2
688,292 + CA264_03000 0.32 -0.4
688,326 + CA264_03000 0.35 +1.2
688,327 - CA264_03000 0.35 -0.1
688,327 - CA264_03000 0.35 +0.1
688,396 + CA264_03000 0.40 +0.7
688,456 + CA264_03000 0.45 +0.0
688,456 + CA264_03000 0.45 -1.7
688,457 - CA264_03000 0.45 -0.6
688,457 - CA264_03000 0.45 -0.4
688,459 + CA264_03000 0.45 +0.1
688,459 + CA264_03000 0.45 -0.3
688,460 - CA264_03000 0.45 -0.5
688,499 - CA264_03000 0.49 -0.1
688,569 + CA264_03000 0.54 +2.0
688,569 + CA264_03000 0.54 +1.8
688,580 + CA264_03000 0.55 -0.8
688,586 - CA264_03000 0.56 -0.3
688,701 + CA264_03000 0.65 -0.1
688,701 + CA264_03000 0.65 -0.3
688,701 + CA264_03000 0.65 +0.8
688,701 + CA264_03000 0.65 -0.1
688,702 - CA264_03000 0.65 -0.4
688,702 - CA264_03000 0.65 -0.3
688,702 - CA264_03000 0.65 +0.0
688,702 - CA264_03000 0.65 +0.5
688,704 - CA264_03000 0.65 -0.3
688,723 - CA264_03000 0.67 +0.2
688,737 - CA264_03000 0.68 +0.1
688,737 - CA264_03000 0.68 +0.3
688,737 - CA264_03000 0.68 -1.3
688,871 + CA264_03000 0.79 -0.2
688,871 + CA264_03000 0.79 -0.1

Or see this region's nucleotide sequence