Strain Fitness in Bosea sp. OAE506 around ABIE41_RS18840

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
3,879,335	-				+1.0
3,879,335	-				+0.7
3,879,400	-				-0.4
3,879,410	+				-0.4
3,879,410	+				-0.5
3,879,410	+				-1.2
3,879,411	-				-0.5
3,879,517	+				-0.6
3,879,517	+				+0.1
3,879,550	+				-1.2
3,879,550	+				+0.2
3,879,587	+				+1.4
3,879,587	+				-1.5
3,879,587	+				-1.2
3,879,587	+				+0.3
3,879,588	-				+0.4
3,879,588	-				-0.5
3,879,588	-				-2.0
3,879,588	-				+0.2
3,879,588	-				-2.4
3,879,592	-				+0.1
3,879,639	+		ABIE41_RS18835	0.12	+0.2
3,879,639	+		ABIE41_RS18835	0.12	-1.7
3,879,639	+		ABIE41_RS18835	0.12	-0.8
3,879,639	+		ABIE41_RS18835	0.12	-0.7
3,879,640	-		ABIE41_RS18835	0.12	+0.9
3,879,640	-		ABIE41_RS18835	0.12	+0.1
3,879,640	-		ABIE41_RS18835	0.12	+1.2
3,879,640	-		ABIE41_RS18835	0.12	+0.2
3,879,689	+		ABIE41_RS18835	0.22	-2.0
3,879,844	+		ABIE41_RS18835	0.51	-2.4
3,879,844	+		ABIE41_RS18835	0.51	-0.7
3,879,845	-		ABIE41_RS18835	0.51	+1.1
3,879,845	-		ABIE41_RS18835	0.51	-2.4
3,879,845	-		ABIE41_RS18835	0.51	-0.1
3,879,941	-		ABIE41_RS18835	0.70	-0.6
3,879,941	-		ABIE41_RS18835	0.70	+0.2
3,879,941	-		ABIE41_RS18835	0.70	+0.7
3,879,962	+		ABIE41_RS18835	0.74	-2.6
3,879,962	+		ABIE41_RS18835	0.74	+0.5
3,879,962	+		ABIE41_RS18835	0.74	+0.0
3,879,963	-		ABIE41_RS18835	0.74	-0.6
3,879,963	-		ABIE41_RS18835	0.74	-2.7
3,879,963	-		ABIE41_RS18835	0.74	+0.1
3,880,039	+		ABIE41_RS18835	0.88	-2.0
3,880,054	+				-0.6
3,880,054	+				+0.7
3,880,054	+				+0.9
3,880,055	-				+0.8
3,880,055	-				+1.0
3,880,145	+				-0.9
3,880,146	-				-1.0
3,880,164	-				+1.9
3,880,164	-				+0.4
3,880,164	-				-0.1
3,880,184	-				+0.9
3,880,238	+				+0.1
3,880,238	+				+0.8
3,880,238	+				-0.8
3,880,238	+				+0.1
3,880,246	-				+0.2
3,880,282	+				+0.0
3,880,282	+				-0.1
3,880,282	+				-0.9
3,880,283	-				+0.1
3,880,295	+				-1.2
3,880,296	-				+0.4
3,880,344	-		ABIE41_RS18840	0.15	-0.4
3,880,347	+		ABIE41_RS18840	0.16	-1.4
3,880,413	+		ABIE41_RS18840	0.23	+0.2
3,880,413	+		ABIE41_RS18840	0.23	+0.1
3,880,413	+		ABIE41_RS18840	0.23	-0.9
3,880,413	+		ABIE41_RS18840	0.23	-1.5
3,880,413	+		ABIE41_RS18840	0.23	-0.1
3,880,414	-		ABIE41_RS18840	0.23	-1.4
3,880,414	-		ABIE41_RS18840	0.23	-0.5
3,880,414	-		ABIE41_RS18840	0.23	+0.1
3,880,414	-		ABIE41_RS18840	0.23	-2.8
3,880,414	-		ABIE41_RS18840	0.23	+1.3
3,880,415	+		ABIE41_RS18840	0.23	+1.7
3,880,453	+		ABIE41_RS18840	0.27	-1.2
3,880,544	+		ABIE41_RS18840	0.38	+1.3
3,880,544	+		ABIE41_RS18840	0.38	-2.0
3,880,545	-		ABIE41_RS18840	0.38	-0.2
3,880,545	-		ABIE41_RS18840	0.38	-0.3
3,880,545	-		ABIE41_RS18840	0.38	-1.8
3,880,545	-		ABIE41_RS18840	0.38	+0.8
3,880,545	-		ABIE41_RS18840	0.38	-2.4
3,880,545	-		ABIE41_RS18840	0.38	-0.3
3,880,589	+		ABIE41_RS18840	0.43	-0.7
3,880,589	+		ABIE41_RS18840	0.43	-0.2
3,880,590	-		ABIE41_RS18840	0.43	+0.0
3,880,590	-		ABIE41_RS18840	0.43	+0.1
3,880,767	+		ABIE41_RS18840	0.63	+0.1
3,880,767	+		ABIE41_RS18840	0.63	-0.4
3,880,767	+		ABIE41_RS18840	0.63	+1.4
3,880,768	-		ABIE41_RS18840	0.63	+0.4
3,880,828	+		ABIE41_RS18840	0.70	-1.9
3,880,828	+		ABIE41_RS18840	0.70	+2.1
3,880,828	+		ABIE41_RS18840	0.70	-0.3
3,880,828	+		ABIE41_RS18840	0.70	+0.5
3,880,828	+		ABIE41_RS18840	0.70	+1.0
3,880,829	-		ABIE41_RS18840	0.70	+1.3
3,880,829	-		ABIE41_RS18840	0.70	+0.2
3,880,911	+		ABIE41_RS18840	0.79	+0.4
3,881,052	+				-1.2
3,881,052	+				-0.1
3,881,053	-				+0.5
3,881,146	-				-1.2
3,881,172	+				-0.8
3,881,172	+				-0.5
3,881,173	-				+0.6
3,881,173	-				-0.2
3,881,173	-				-1.7
3,881,200	+				+0.5
3,881,201	-				-2.4
3,881,201	-				+0.5
3,881,201	-				-0.2
3,881,201	-				-0.4
3,881,207	+				+0.9
3,881,207	+				+1.9
3,881,207	+				+0.1
3,881,207	+				+1.2
3,881,207	+				-0.5
3,881,208	-				+0.0
3,881,208	-				+0.8
3,881,208	-				-0.1
3,881,208	-				+0.4
3,881,237	+				+0.8
3,881,238	-				-0.1
3,881,238	-				-2.1
3,881,287	+				-1.0
3,881,288	-				-1.9
3,881,288	-				-0.4
3,881,331	+				+0.3
3,881,331	+				-0.9
3,881,331	+				-2.2
3,881,331	+				-0.0
3,881,331	+				-0.5
3,881,332	-				-1.2
3,881,412	+		ABIE41_RS18845	0.23	+0.4
3,881,482	+		ABIE41_RS18845	0.36	-1.9
3,881,482	+		ABIE41_RS18845	0.36	-0.2
3,881,482	+		ABIE41_RS18845	0.36	+1.0
3,881,482	+		ABIE41_RS18845	0.36	+0.0
3,881,482	+		ABIE41_RS18845	0.36	+0.4
3,881,483	-		ABIE41_RS18845	0.36	+1.5
3,881,483	-		ABIE41_RS18845	0.36	-1.9
3,881,483	-		ABIE41_RS18845	0.36	-0.7
3,881,483	-		ABIE41_RS18845	0.36	+2.0
3,881,484	+		ABIE41_RS18845	0.36	-0.2
3,881,484	+		ABIE41_RS18845	0.36	+0.9
3,881,484	+		ABIE41_RS18845	0.36	-0.5
3,881,485	-		ABIE41_RS18845	0.37	+2.5
3,881,555	+		ABIE41_RS18845	0.50	-1.6
3,881,568	+		ABIE41_RS18845	0.52	-1.9
3,881,569	-		ABIE41_RS18845	0.52	+0.3
3,881,572	+		ABIE41_RS18845	0.53	-0.3
3,881,572	+		ABIE41_RS18845	0.53	-0.8
3,881,572	+		ABIE41_RS18845	0.53	-2.2
3,881,572	+		ABIE41_RS18845	0.53	+0.2
3,881,573	-		ABIE41_RS18845	0.53	-2.9
3,881,573	-		ABIE41_RS18845	0.53	+0.8
3,881,573	-		ABIE41_RS18845	0.53	+0.0
3,881,853	+				+0.6
3,881,853	+				-0.4
3,881,853	+				+1.7
3,881,854	-				+0.1
3,881,854	-				+0.1
3,881,892	+				+0.5
3,882,043	+		ABIE41_RS18850	0.46	+1.0
3,882,043	+		ABIE41_RS18850	0.46	-0.4
3,882,043	+		ABIE41_RS18850	0.46	+0.0
3,882,043	+		ABIE41_RS18850	0.46	-0.9
3,882,044	-		ABIE41_RS18850	0.46	+0.6
3,882,044	-		ABIE41_RS18850	0.46	-0.2
3,882,089	-		ABIE41_RS18850	0.60	-0.5
3,882,089	-		ABIE41_RS18850	0.60	-0.8