Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS12135

Experiment: L-Methionine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Methionine (C)
2,364,436	+				-0.2
2,364,436	+				+0.5
2,364,591	+		ABIE40_RS12130	0.16	+1.2
2,364,591	+		ABIE40_RS12130	0.16	-0.4
2,364,591	+		ABIE40_RS12130	0.16	+0.2
2,364,754	-		ABIE40_RS12130	0.34	-0.6
2,364,814	-		ABIE40_RS12130	0.40	-0.2
2,364,892	-		ABIE40_RS12130	0.49	-0.8
2,364,892	-		ABIE40_RS12130	0.49	+0.2
2,365,149	+		ABIE40_RS12130	0.77	+0.0
2,365,149	+		ABIE40_RS12130	0.77	+0.1
2,365,150	-		ABIE40_RS12130	0.78	-1.6
2,365,150	-		ABIE40_RS12130	0.78	-0.3
2,365,150	-		ABIE40_RS12130	0.78	+1.0
2,365,158	+		ABIE40_RS12130	0.78	+1.1
2,365,159	-		ABIE40_RS12130	0.79	+0.3
2,365,159	-		ABIE40_RS12130	0.79	-1.9
2,365,332	-				-0.1
2,365,336	+				+0.3
2,365,336	+				+0.8
2,365,337	-				+0.7
2,365,454	+				+1.3
2,365,455	-				-0.2
2,365,455	-				-0.3
2,365,455	-				-0.6
2,365,455	-				+0.2
2,365,455	-				+1.8
2,365,455	-				-0.6
2,365,455	-				-0.4
2,365,458	+				+0.3
2,365,458	+				-0.0
2,365,458	+				-0.9
2,365,458	+				+0.6
2,365,458	+				+0.1
2,365,458	+				-0.8
2,365,459	-				+1.4
2,365,459	-				-0.4
2,365,459	-				+0.5
2,365,459	-				-1.7
2,365,459	-				-1.6
2,365,459	-				+0.3
2,365,459	-				-0.5
2,365,564	-				-1.6
2,365,587	+				-0.6
2,365,588	-				+0.4
2,365,588	-				-2.6
2,365,588	-				-2.4
2,365,741	-				-1.4
2,365,960	-		ABIE40_RS12135	0.14	-2.0
2,366,301	+		ABIE40_RS12135	0.23	-2.2
2,366,302	-		ABIE40_RS12135	0.24	-1.2
2,366,374	-		ABIE40_RS12135	0.25	-1.4
2,366,476	-		ABIE40_RS12135	0.28	+1.4
2,366,499	+		ABIE40_RS12135	0.29	-1.4
2,366,499	+		ABIE40_RS12135	0.29	-2.2
2,366,499	+		ABIE40_RS12135	0.29	-1.7
2,366,500	-		ABIE40_RS12135	0.29	-1.7
2,366,500	-		ABIE40_RS12135	0.29	+1.4
2,366,568	+		ABIE40_RS12135	0.31	-1.6
2,366,627	-		ABIE40_RS12135	0.32	-1.2
2,366,950	-		ABIE40_RS12135	0.41	-2.7
2,367,130	+		ABIE40_RS12135	0.45	-1.7
2,367,130	+		ABIE40_RS12135	0.45	-1.4
2,367,131	-		ABIE40_RS12135	0.45	-2.6
2,367,131	-		ABIE40_RS12135	0.45	-1.2
2,367,132	+		ABIE40_RS12135	0.45	-2.8
2,367,133	-		ABIE40_RS12135	0.46	-1.2
2,367,336	+		ABIE40_RS12135	0.51	-1.4
2,367,336	+		ABIE40_RS12135	0.51	-2.0
2,367,479	-		ABIE40_RS12135	0.55	-2.2
2,367,479	-		ABIE40_RS12135	0.55	-2.0
2,367,669	+		ABIE40_RS12135	0.60	-1.4
2,368,168	-		ABIE40_RS12135	0.73	-0.2
2,368,168	-		ABIE40_RS12135	0.73	+1.4
2,368,299	+		ABIE40_RS12135	0.76	+1.4
2,368,662	+		ABIE40_RS12135	0.86	-1.7
2,368,662	+		ABIE40_RS12135	0.86	-1.9
2,368,939	+				+1.4
2,369,247	-				-0.9
2,369,254	+				+0.3
2,369,255	-				+1.4
2,369,255	-				-0.2
2,369,255	-				-1.2
2,369,255	-				-0.0
2,369,255	-				-1.3
2,369,257	-				-0.7
2,369,257	-				-1.1
2,369,279	-				+0.4
2,369,279	-				+1.7
2,369,315	+				-1.2
2,369,315	+				-2.5
2,369,315	+				+0.2
2,369,315	+				-0.4
2,369,315	+				-1.9
2,369,315	+				+0.4
2,369,315	+				+0.8
2,369,315	+				-0.1
2,369,315	+				+1.0
2,369,315	+				+2.4
2,369,316	-				+0.8
2,369,316	-				-0.6
2,369,316	-				+1.1
2,369,316	-				-0.1
2,369,316	-				-0.1
2,369,316	-				-0.4
2,369,316	-				-0.6
2,369,316	-				+1.9
2,369,316	-				+0.3
2,369,316	-				-1.2
2,369,316	-				-2.0
2,369,317	+				-0.2
2,369,317	+				+1.4
2,369,317	+				+0.7
2,369,317	+				-0.2
2,369,317	+				+0.8
2,369,317	+				-3.0
2,369,317	+				-0.7
2,369,317	+				+0.3
2,369,318	-				+0.0
2,369,318	-				+0.3
2,369,318	-				+0.3
2,369,318	-				-0.1
2,369,318	-				-0.7
2,369,320	-				+0.1
2,369,320	-				-1.2
2,369,320	-				-0.6
2,369,320	-				+1.3
2,369,320	-				+0.7
2,369,320	-				-1.1
2,369,320	-				+1.4
2,369,413	+				-0.2
2,369,413	+				+0.4
2,369,497	+		ABIE40_RS12140	0.11	-1.3
2,369,497	+		ABIE40_RS12140	0.11	-0.2
2,369,498	-		ABIE40_RS12140	0.11	-1.2
2,369,498	-		ABIE40_RS12140	0.11	-0.4
2,369,557	-		ABIE40_RS12140	0.15	+2.4
2,369,645	-		ABIE40_RS12140	0.22	-1.7
2,369,645	-		ABIE40_RS12140	0.22	-0.5
2,369,645	-		ABIE40_RS12140	0.22	+0.1
2,369,683	+		ABIE40_RS12140	0.25	-0.5
2,369,684	-		ABIE40_RS12140	0.26	+2.4
2,369,684	-		ABIE40_RS12140	0.26	-0.5
2,369,684	-		ABIE40_RS12140	0.26	+0.7
2,369,703	+		ABIE40_RS12140	0.27	+0.1
2,369,832	+		ABIE40_RS12140	0.37	-0.7
2,369,833	-		ABIE40_RS12140	0.37	-2.0
2,369,911	+		ABIE40_RS12140	0.44	+0.8
2,369,986	+		ABIE40_RS12140	0.50	-0.4
2,369,986	+		ABIE40_RS12140	0.50	+0.8
2,369,986	+		ABIE40_RS12140	0.50	-0.8
2,369,987	-		ABIE40_RS12140	0.50	+2.2
2,369,987	-		ABIE40_RS12140	0.50	+0.8
2,370,069	-		ABIE40_RS12140	0.56	-1.2
2,370,097	+		ABIE40_RS12140	0.58	+0.1
2,370,097	+		ABIE40_RS12140	0.58	-0.2
2,370,097	+		ABIE40_RS12140	0.58	-0.2
2,370,097	+		ABIE40_RS12140	0.58	-2.2
2,370,097	+		ABIE40_RS12140	0.58	-0.4
2,370,098	-		ABIE40_RS12140	0.58	+0.7
2,370,098	-		ABIE40_RS12140	0.58	-1.3
2,370,098	-		ABIE40_RS12140	0.58	-0.5
2,370,100	+		ABIE40_RS12140	0.59	-0.3
2,370,100	+		ABIE40_RS12140	0.59	-0.9
2,370,100	+		ABIE40_RS12140	0.59	-0.2
2,370,100	+		ABIE40_RS12140	0.59	-0.3
2,370,100	+		ABIE40_RS12140	0.59	-1.0
2,370,100	+		ABIE40_RS12140	0.59	-3.5
2,370,100	+		ABIE40_RS12140	0.59	+2.6
2,370,101	-		ABIE40_RS12140	0.59	+0.3
2,370,101	-		ABIE40_RS12140	0.59	+0.7
2,370,101	-		ABIE40_RS12140	0.59	+0.1
2,370,101	-		ABIE40_RS12140	0.59	+0.4
2,370,101	-		ABIE40_RS12140	0.59	+0.4