Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS09150

Experiment: L-Methionine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Methionine (C)
1,762,117	+		ABIE40_RS09140	0.64	-4.0
1,762,117	+		ABIE40_RS09140	0.64	-3.0
1,762,118	-		ABIE40_RS09140	0.64	-0.5
1,762,139	+		ABIE40_RS09140	0.65	-6.4
1,762,139	+		ABIE40_RS09140	0.65	-3.2
1,762,139	+		ABIE40_RS09140	0.65	-1.4
1,762,189	+		ABIE40_RS09140	0.69	-3.7
1,762,190	+		ABIE40_RS09140	0.69	-1.2
1,762,191	-		ABIE40_RS09140	0.69	-4.3
1,762,191	-		ABIE40_RS09140	0.69	-4.5
1,762,191	-		ABIE40_RS09140	0.69	-2.2
1,762,364	+		ABIE40_RS09140	0.81	-1.2
1,762,364	+		ABIE40_RS09140	0.81	-0.7
1,762,364	+		ABIE40_RS09140	0.81	+0.3
1,762,364	+		ABIE40_RS09140	0.81	-0.7
1,762,364	+		ABIE40_RS09140	0.81	-0.3
1,762,364	+		ABIE40_RS09140	0.81	-2.2
1,762,365	-		ABIE40_RS09140	0.81	-3.2
1,762,365	-		ABIE40_RS09140	0.81	-3.5
1,762,365	-		ABIE40_RS09140	0.81	-2.4
1,762,365	-		ABIE40_RS09140	0.81	-3.9
1,762,365	-		ABIE40_RS09140	0.81	-1.6
1,762,366	+		ABIE40_RS09140	0.81	+0.1
1,762,419	+		ABIE40_RS09140	0.85	-0.3
1,762,420	-		ABIE40_RS09140	0.85	-4.3
1,762,646	+				-1.4
1,762,646	+				-1.2
1,762,647	-				-2.1
1,762,647	-				-1.9
1,762,647	-				-2.7
1,762,655	+				-2.7
1,762,795	+		ABIE40_RS09145	0.49	-5.3
1,762,796	-		ABIE40_RS09145	0.49	-4.3
1,762,796	-		ABIE40_RS09145	0.49	-2.2
1,762,796	-		ABIE40_RS09145	0.49	-2.5
1,762,853	+		ABIE40_RS09145	0.67	-1.7
1,762,853	+		ABIE40_RS09145	0.67	-2.8
1,762,854	-		ABIE40_RS09145	0.67	-3.0
1,762,854	-		ABIE40_RS09145	0.67	-1.3
1,762,854	-		ABIE40_RS09145	0.67	-2.4
1,762,909	+		ABIE40_RS09145	0.85	-1.6
1,762,909	+		ABIE40_RS09145	0.85	+0.3
1,762,909	+		ABIE40_RS09145	0.85	-1.1
1,762,909	+		ABIE40_RS09145	0.85	-0.6
1,762,909	+		ABIE40_RS09145	0.85	+0.1
1,762,909	+		ABIE40_RS09145	0.85	-0.6
1,762,909	+		ABIE40_RS09145	0.85	-0.8
1,762,909	+		ABIE40_RS09145	0.85	-0.2
1,762,910	-		ABIE40_RS09145	0.85	-3.7
1,762,910	-		ABIE40_RS09145	0.85	-2.2
1,762,910	-		ABIE40_RS09145	0.85	-2.1
1,762,968	+				-3.7
1,762,968	+				-2.5
1,762,968	+				-1.2
1,762,969	-				-3.9
1,762,969	-				-1.2
1,763,100	+				-1.4
1,763,118	+				-3.3
1,763,118	+				-2.6
1,763,118	+				-4.4
1,763,118	+				-1.7
1,763,118	+				-3.7
1,763,118	+				-3.4
1,763,118	+				-3.4
1,763,118	+				-2.7
1,763,119	-				-1.5
1,763,119	-				-2.7
1,763,119	-				-4.7
1,763,119	-				-4.7
1,763,119	-				-1.5
1,763,142	+		ABIE40_RS09150	0.11	-2.4
1,763,196	+		ABIE40_RS09150	0.14	-2.8
1,763,196	+		ABIE40_RS09150	0.14	-1.0
1,763,196	+		ABIE40_RS09150	0.14	-2.7
1,763,196	+		ABIE40_RS09150	0.14	-2.1
1,763,196	+		ABIE40_RS09150	0.14	-1.9
1,763,196	+		ABIE40_RS09150	0.14	-3.2
1,763,197	-		ABIE40_RS09150	0.14	-4.9
1,763,197	-		ABIE40_RS09150	0.14	-5.3
1,763,397	+		ABIE40_RS09150	0.26	-3.7
1,763,397	+		ABIE40_RS09150	0.26	-3.0
1,763,397	+		ABIE40_RS09150	0.26	-4.5
1,763,398	-		ABIE40_RS09150	0.26	-3.2
1,763,531	+		ABIE40_RS09150	0.34	-4.0
1,763,543	+		ABIE40_RS09150	0.35	-4.7
1,763,569	-		ABIE40_RS09150	0.36	-3.0
1,763,569	-		ABIE40_RS09150	0.36	-4.8
1,763,673	+		ABIE40_RS09150	0.42	-4.7
1,763,674	-		ABIE40_RS09150	0.42	-3.4
1,763,674	-		ABIE40_RS09150	0.42	-3.5
1,763,674	-		ABIE40_RS09150	0.42	-4.2
1,763,680	+		ABIE40_RS09150	0.43	-4.0
1,763,681	-		ABIE40_RS09150	0.43	-2.4
1,763,699	+		ABIE40_RS09150	0.44	-4.9
1,763,699	+		ABIE40_RS09150	0.44	-1.0
1,763,700	-		ABIE40_RS09150	0.44	-3.9
1,763,700	-		ABIE40_RS09150	0.44	-3.2
1,763,700	-		ABIE40_RS09150	0.44	-3.6
1,763,700	-		ABIE40_RS09150	0.44	-1.7
1,763,700	-		ABIE40_RS09150	0.44	-1.9
1,763,703	+		ABIE40_RS09150	0.44	-2.5
1,763,703	+		ABIE40_RS09150	0.44	-3.7
1,763,703	+		ABIE40_RS09150	0.44	-1.5
1,763,703	+		ABIE40_RS09150	0.44	-1.2
1,763,703	+		ABIE40_RS09150	0.44	-4.2
1,763,703	+		ABIE40_RS09150	0.44	-2.7
1,763,703	+		ABIE40_RS09150	0.44	-3.0
1,763,703	+		ABIE40_RS09150	0.44	-4.9
1,763,703	+		ABIE40_RS09150	0.44	-4.1
1,763,703	+		ABIE40_RS09150	0.44	-2.3
1,763,704	-		ABIE40_RS09150	0.44	-1.9
1,763,704	-		ABIE40_RS09150	0.44	-1.2
1,763,965	-		ABIE40_RS09150	0.60	-3.1
1,764,060	+		ABIE40_RS09150	0.66	-5.5
1,764,060	+		ABIE40_RS09150	0.66	-4.9
1,764,061	-		ABIE40_RS09150	0.66	-2.4
1,764,061	-		ABIE40_RS09150	0.66	-3.9
1,764,061	-		ABIE40_RS09150	0.66	-4.2
1,764,141	+		ABIE40_RS09150	0.70	-5.0
1,764,222	+		ABIE40_RS09150	0.75	-2.9
1,764,222	+		ABIE40_RS09150	0.75	-4.5
1,764,222	+		ABIE40_RS09150	0.75	-4.0
1,764,223	-		ABIE40_RS09150	0.75	-1.2
1,764,223	-		ABIE40_RS09150	0.75	-3.1
1,764,223	-		ABIE40_RS09150	0.75	-2.4
1,764,223	-		ABIE40_RS09150	0.75	-0.9
1,764,372	-		ABIE40_RS09150	0.84	-1.9
1,764,373	+		ABIE40_RS09150	0.84	-3.2
1,764,411	+		ABIE40_RS09150	0.87	-1.7
1,764,411	+		ABIE40_RS09150	0.87	-5.3
1,764,411	+		ABIE40_RS09150	0.87	-2.9
1,764,412	-		ABIE40_RS09150	0.87	-5.1
1,764,521	+				-3.5
1,764,522	-				-3.5
1,764,522	-				-3.2
1,764,525	+				-4.0
1,764,525	+				-3.5
1,764,525	+				-5.3
1,764,525	+				-2.8
1,764,526	-				-3.9
1,764,526	-				-1.2
1,764,526	-				-2.4
1,764,609	+				-0.9
1,764,609	+				-1.7
1,764,610	-				-3.2
1,764,937	+		ABIE40_RS09155	0.57	-2.2
1,764,938	-		ABIE40_RS09155	0.57	-1.9
1,764,938	-		ABIE40_RS09155	0.57	-4.0
1,765,084	+		ABIE40_RS09155	0.85	+1.1
1,765,085	-		ABIE40_RS09155	0.86	-4.7
1,765,085	-		ABIE40_RS09155	0.86	-2.9
1,765,085	-		ABIE40_RS09155	0.86	-1.7
1,765,123	+				-0.8
1,765,123	+				-1.5
1,765,125	+				-3.5
1,765,125	+				-1.2
1,765,125	+				-3.4
1,765,125	+				-3.5
1,765,125	+				-4.2
1,765,125	+				-5.0
1,765,125	+				-2.6
1,765,125	+				-3.7
1,765,125	+				-0.7
1,765,125	+				-4.1
1,765,125	+				-5.8
1,765,125	+				-3.5
1,765,125	+				+1.1
1,765,125	+				-4.0
1,765,125	+				-3.3
1,765,126	-				-2.5
1,765,126	-				-1.2
1,765,156	+				+0.1