Experiment: M63_quarter_strength
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt UW163_RS04510 and UW163_RS04515 are separated by 26 nucleotides UW163_RS04515 and UW163_RS04520 are separated by 237 nucleotides UW163_RS04520 and UW163_RS04525 are separated by 172 nucleotides
UW163_RS04510: UW163_RS04510 - nitrate ABC transporter ATP-binding protein, at 964,598 to 965,950
_RS04510
UW163_RS04515: UW163_RS04515 - sulfonate ABC transporter permease, at 965,977 to 967,737
_RS04515
UW163_RS04520: UW163_RS04520 - acylphosphatase, at 967,975 to 968,262
_RS04520
UW163_RS04525: UW163_RS04525 - hypothetical protein, at 968,435 to 969,724
_RS04525
Position (kb) 965
966
967
968 Strain fitness (log2 ratio) -1
0
1
2 at 965.199 kb on + strand, within UW163_RS04510 at 965.200 kb on - strand, within UW163_RS04510 at 965.200 kb on - strand, within UW163_RS04510 at 965.200 kb on - strand, within UW163_RS04510 at 965.200 kb on - strand, within UW163_RS04510 at 965.721 kb on + strand, within UW163_RS04510 at 965.966 kb on + strand at 965.978 kb on + strand at 965.978 kb on + strand at 965.979 kb on - strand at 966.008 kb on + strand at 966.008 kb on + strand at 966.009 kb on - strand at 966.116 kb on + strand at 966.116 kb on + strand at 966.117 kb on - strand at 966.117 kb on - strand at 966.164 kb on + strand, within UW163_RS04515 at 966.164 kb on + strand, within UW163_RS04515 at 966.165 kb on - strand, within UW163_RS04515 at 966.354 kb on - strand, within UW163_RS04515 at 966.354 kb on - strand, within UW163_RS04515 at 966.947 kb on + strand, within UW163_RS04515 at 966.948 kb on - strand, within UW163_RS04515 at 967.028 kb on + strand, within UW163_RS04515 at 967.029 kb on - strand, within UW163_RS04515 at 967.029 kb on - strand, within UW163_RS04515 at 967.247 kb on + strand, within UW163_RS04515 at 967.520 kb on + strand, within UW163_RS04515 at 967.520 kb on + strand, within UW163_RS04515 at 967.520 kb on + strand, within UW163_RS04515 at 967.521 kb on - strand, within UW163_RS04515 at 967.521 kb on - strand, within UW163_RS04515 at 967.521 kb on - strand, within UW163_RS04515 at 967.521 kb on - strand, within UW163_RS04515 at 967.523 kb on + strand, within UW163_RS04515 at 967.524 kb on - strand, within UW163_RS04515 at 967.524 kb on - strand, within UW163_RS04515 at 967.574 kb on + strand at 967.574 kb on + strand at 967.575 kb on - strand at 967.575 kb on - strand at 967.842 kb on - strand at 967.851 kb on - strand at 968.006 kb on + strand, within UW163_RS04520 at 968.006 kb on + strand, within UW163_RS04520 at 968.006 kb on + strand, within UW163_RS04520 at 968.006 kb on + strand, within UW163_RS04520 at 968.006 kb on + strand, within UW163_RS04520 at 968.006 kb on + strand, within UW163_RS04520 at 968.007 kb on - strand, within UW163_RS04520 at 968.007 kb on - strand, within UW163_RS04520 at 968.007 kb on - strand, within UW163_RS04520 at 968.219 kb on + strand, within UW163_RS04520 at 968.220 kb on - strand, within UW163_RS04520 at 968.220 kb on - strand, within UW163_RS04520 at 968.316 kb on + strand at 968.390 kb on + strand at 968.390 kb on + strand at 968.697 kb on - strand, within UW163_RS04525
Per-strain Table
Position Strand Gene LocusTag Fraction M63_quarter_strength remove 965,199 + UW163_RS04510 0.44 -0.2 965,200 - UW163_RS04510 0.44 +0.7 965,200 - UW163_RS04510 0.44 -0.3 965,200 - UW163_RS04510 0.44 -0.4 965,200 - UW163_RS04510 0.44 +0.4 965,721 + UW163_RS04510 0.83 -0.4 965,966 + +0.6 965,978 + +0.7 965,978 + +0.0 965,979 - -0.4 966,008 + -1.1 966,008 + -0.3 966,009 - +0.7 966,116 + +1.4 966,116 + +0.9 966,117 - +0.7 966,117 - -0.4 966,164 + UW163_RS04515 0.11 -0.4 966,164 + UW163_RS04515 0.11 +0.7 966,165 - UW163_RS04515 0.11 -0.1 966,354 - UW163_RS04515 0.21 -0.3 966,354 - UW163_RS04515 0.21 +0.2 966,947 + UW163_RS04515 0.55 -0.2 966,948 - UW163_RS04515 0.55 +1.9 967,028 + UW163_RS04515 0.60 +0.1 967,029 - UW163_RS04515 0.60 +0.2 967,029 - UW163_RS04515 0.60 -0.4 967,247 + UW163_RS04515 0.72 +0.0 967,520 + UW163_RS04515 0.88 -0.3 967,520 + UW163_RS04515 0.88 -0.1 967,520 + UW163_RS04515 0.88 -0.6 967,521 - UW163_RS04515 0.88 -1.0 967,521 - UW163_RS04515 0.88 -0.3 967,521 - UW163_RS04515 0.88 +0.1 967,521 - UW163_RS04515 0.88 -0.2 967,523 + UW163_RS04515 0.88 -0.6 967,524 - UW163_RS04515 0.88 -0.5 967,524 - UW163_RS04515 0.88 -1.1 967,574 + -0.3 967,574 + -0.2 967,575 - -0.5 967,575 - -0.0 967,842 - +1.0 967,851 - -0.9 968,006 + UW163_RS04520 0.11 -0.1 968,006 + UW163_RS04520 0.11 +0.2 968,006 + UW163_RS04520 0.11 +1.3 968,006 + UW163_RS04520 0.11 +0.2 968,006 + UW163_RS04520 0.11 +2.0 968,006 + UW163_RS04520 0.11 -0.1 968,007 - UW163_RS04520 0.11 +0.2 968,007 - UW163_RS04520 0.11 -0.8 968,007 - UW163_RS04520 0.11 -0.2 968,219 + UW163_RS04520 0.85 -0.3 968,220 - UW163_RS04520 0.85 +0.2 968,220 - UW163_RS04520 0.85 -0.2 968,316 + +0.0 968,390 + -1.0 968,390 + -0.4 968,697 - UW163_RS04525 0.20 -0.2
Or see this region's nucleotide sequence