Experiment: M63_quarter_strength
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt UW163_RS03660 and UW163_RS03665 are separated by 125 nucleotides UW163_RS03665 and UW163_RS03670 are separated by 142 nucleotides UW163_RS03670 and UW163_RS03675 are separated by 25 nucleotides
UW163_RS03660: UW163_RS03660 - thiamine phosphate synthase, at 761,070 to 762,236
_RS03660
UW163_RS03665: UW163_RS03665 - VOC family protein, at 762,362 to 762,841
_RS03665
UW163_RS03670: UW163_RS03670 - hypothetical protein, at 762,984 to 763,346
_RS03670
UW163_RS03675: UW163_RS03675 - bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase, at 763,372 to 764,286
_RS03675
Position (kb) 762
763 Strain fitness (log2 ratio) -1
0
1 at 762.181 kb on + strand at 762.292 kb on + strand at 762.292 kb on + strand at 762.292 kb on + strand at 762.292 kb on + strand at 762.293 kb on - strand at 762.293 kb on - strand at 762.293 kb on - strand at 762.407 kb on + strand at 762.447 kb on - strand, within UW163_RS03665 at 762.620 kb on + strand, within UW163_RS03665 at 762.620 kb on + strand, within UW163_RS03665 at 762.620 kb on + strand, within UW163_RS03665 at 762.620 kb on + strand, within UW163_RS03665 at 762.620 kb on + strand, within UW163_RS03665 at 762.620 kb on + strand, within UW163_RS03665 at 762.620 kb on + strand, within UW163_RS03665 at 762.620 kb on + strand, within UW163_RS03665 at 762.621 kb on - strand, within UW163_RS03665 at 762.621 kb on - strand, within UW163_RS03665 at 762.621 kb on - strand, within UW163_RS03665 at 762.621 kb on - strand, within UW163_RS03665 at 762.621 kb on - strand, within UW163_RS03665 at 762.701 kb on + strand, within UW163_RS03665 at 763.056 kb on - strand, within UW163_RS03670 at 763.245 kb on - strand, within UW163_RS03670
Per-strain Table
Position Strand Gene LocusTag Fraction M63_quarter_strength remove 762,181 + -0.0 762,292 + -0.4 762,292 + -1.0 762,292 + +0.1 762,292 + -0.2 762,293 - -0.2 762,293 - +0.3 762,293 - +0.4 762,407 + +0.1 762,447 - UW163_RS03665 0.18 +0.1 762,620 + UW163_RS03665 0.54 -0.0 762,620 + UW163_RS03665 0.54 +0.3 762,620 + UW163_RS03665 0.54 +0.3 762,620 + UW163_RS03665 0.54 -0.0 762,620 + UW163_RS03665 0.54 +0.7 762,620 + UW163_RS03665 0.54 -0.2 762,620 + UW163_RS03665 0.54 -0.3 762,620 + UW163_RS03665 0.54 +0.1 762,621 - UW163_RS03665 0.54 +0.5 762,621 - UW163_RS03665 0.54 -0.0 762,621 - UW163_RS03665 0.54 +0.1 762,621 - UW163_RS03665 0.54 +0.0 762,621 - UW163_RS03665 0.54 +0.2 762,701 + UW163_RS03665 0.71 +0.0 763,056 - UW163_RS03670 0.20 -0.6 763,245 - UW163_RS03670 0.72 +0.5
Or see this region's nucleotide sequence