Experiment: M63_quarter_strength
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt UW163_RS00415 and UW163_RS00420 are separated by 44 nucleotides UW163_RS00420 and UW163_RS00425 are separated by 63 nucleotides UW163_RS00425 and UW163_RS00430 are separated by 135 nucleotides UW163_RS00430 and UW163_RS00435 are separated by 7 nucleotides
UW163_RS00415: UW163_RS00415 - hypothetical protein, at 82,981 to 83,529
_RS00415
UW163_RS00420: UW163_RS00420 - peptidyl-prolyl cis-trans isomerase, at 83,574 to 83,927
_RS00420
UW163_RS00425: UW163_RS00425 - tRNA-Cys, at 83,991 to 84,066
_RS00425
UW163_RS00430: UW163_RS00430 - gamma-glutamylcyclotransferase, at 84,202 to 84,942
_RS00430
UW163_RS00435: UW163_RS00435 - MFS transporter, at 84,950 to 85,735
_RS00435
Position (kb) 83
84
85 Strain fitness (log2 ratio) -1
0
1
2
3 at 83.002 kb on + strand at 83.002 kb on + strand at 83.002 kb on + strand at 83.002 kb on + strand at 83.003 kb on - strand at 83.003 kb on - strand at 83.003 kb on - strand at 83.003 kb on - strand at 83.041 kb on + strand, within UW163_RS00415 at 83.044 kb on + strand, within UW163_RS00415 at 83.045 kb on - strand, within UW163_RS00415 at 83.045 kb on - strand, within UW163_RS00415 at 83.045 kb on - strand, within UW163_RS00415 at 83.294 kb on - strand, within UW163_RS00415 at 83.294 kb on - strand, within UW163_RS00415 at 83.299 kb on + strand, within UW163_RS00415 at 83.299 kb on + strand, within UW163_RS00415 at 83.300 kb on - strand, within UW163_RS00415 at 83.300 kb on - strand, within UW163_RS00415 at 83.505 kb on + strand at 83.607 kb on + strand at 83.607 kb on + strand at 83.608 kb on - strand at 83.608 kb on - strand at 83.655 kb on + strand, within UW163_RS00420 at 83.655 kb on + strand, within UW163_RS00420 at 83.655 kb on + strand, within UW163_RS00420 at 83.656 kb on - strand, within UW163_RS00420 at 83.656 kb on - strand, within UW163_RS00420 at 83.670 kb on + strand, within UW163_RS00420 at 83.670 kb on + strand at 83.670 kb on + strand, within UW163_RS00420 at 83.685 kb on + strand, within UW163_RS00420 at 83.936 kb on + strand at 84.033 kb on + strand, within UW163_RS00425 at 84.033 kb on + strand, within UW163_RS00425 at 84.033 kb on + strand, within UW163_RS00425 at 84.033 kb on + strand, within UW163_RS00425 at 84.033 kb on + strand at 84.035 kb on + strand, within UW163_RS00425 at 84.036 kb on - strand, within UW163_RS00425 at 84.036 kb on - strand, within UW163_RS00425 at 84.036 kb on - strand, within UW163_RS00425 at 84.454 kb on + strand, within UW163_RS00430 at 84.454 kb on + strand, within UW163_RS00430 at 84.455 kb on - strand, within UW163_RS00430 at 84.455 kb on - strand, within UW163_RS00430 at 84.455 kb on - strand, within UW163_RS00430 at 84.760 kb on + strand, within UW163_RS00430 at 84.778 kb on + strand, within UW163_RS00430 at 84.829 kb on + strand, within UW163_RS00430 at 84.829 kb on + strand, within UW163_RS00430 at 84.928 kb on + strand at 84.929 kb on - strand at 84.929 kb on - strand at 84.950 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M63_quarter_strength remove 83,002 + +0.1 83,002 + +0.3 83,002 + +0.2 83,002 + +0.4 83,003 - +1.2 83,003 - +0.6 83,003 - -0.4 83,003 - +0.4 83,041 + UW163_RS00415 0.11 -0.1 83,044 + UW163_RS00415 0.11 +0.6 83,045 - UW163_RS00415 0.12 +0.1 83,045 - UW163_RS00415 0.12 -0.3 83,045 - UW163_RS00415 0.12 +0.5 83,294 - UW163_RS00415 0.57 +0.1 83,294 - UW163_RS00415 0.57 -0.0 83,299 + UW163_RS00415 0.58 +0.1 83,299 + UW163_RS00415 0.58 +0.1 83,300 - UW163_RS00415 0.58 -0.3 83,300 - UW163_RS00415 0.58 +0.9 83,505 + +1.0 83,607 + -0.9 83,607 + -0.4 83,608 - +0.6 83,608 - +0.4 83,655 + UW163_RS00420 0.23 +0.1 83,655 + UW163_RS00420 0.23 +0.4 83,655 + UW163_RS00420 0.23 -0.3 83,656 - UW163_RS00420 0.23 +3.3 83,656 - UW163_RS00420 0.23 +0.0 83,670 + UW163_RS00420 0.27 +0.9 83,670 + +1.8 83,670 + UW163_RS00420 0.27 -0.2 83,685 + UW163_RS00420 0.31 -0.3 83,936 + -0.3 84,033 + UW163_RS00425 0.55 +0.7 84,033 + UW163_RS00425 0.55 -0.6 84,033 + UW163_RS00425 0.55 -0.4 84,033 + UW163_RS00425 0.55 +0.5 84,033 + +2.3 84,035 + UW163_RS00425 0.58 -0.8 84,036 - UW163_RS00425 0.59 +1.9 84,036 - UW163_RS00425 0.59 -0.4 84,036 - UW163_RS00425 0.59 -0.5 84,454 + UW163_RS00430 0.34 +0.3 84,454 + UW163_RS00430 0.34 +0.4 84,455 - UW163_RS00430 0.34 +0.1 84,455 - UW163_RS00430 0.34 +0.2 84,455 - UW163_RS00430 0.34 -0.0 84,760 + UW163_RS00430 0.75 +0.9 84,778 + UW163_RS00430 0.78 -1.4 84,829 + UW163_RS00430 0.85 -0.8 84,829 + UW163_RS00430 0.85 +0.2 84,928 + +1.4 84,929 - -0.1 84,929 - +0.2 84,950 - +0.7
Or see this region's nucleotide sequence