Experiment: No stress control, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_23825 and IAI46_23830 are separated by 42 nucleotides IAI46_23830 and IAI46_23835 are separated by 67 nucleotides IAI46_23835 and IAI46_23840 are separated by 185 nucleotides
IAI46_23825: IAI46_23825 - pimeloyl-ACP methyl ester esterase BioH, at 5,066,683 to 5,067,459
_23825
IAI46_23830: IAI46_23830 - DNA utilization protein GntX, at 5,067,502 to 5,068,185
_23830
IAI46_23835: IAI46_23835 - Fe-S biogenesis protein NfuA, at 5,068,253 to 5,068,828
_23835
IAI46_23840: IAI46_23840 - 4-alpha-glucanotransferase, at 5,069,014 to 5,071,104
_23840
Position (kb)
5068
5069 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5067.285 kb on + strand, within IAI46_23825 at 5067.286 kb on - strand, within IAI46_23825 at 5067.433 kb on + strand at 5067.434 kb on - strand at 5067.447 kb on - strand at 5067.501 kb on + strand at 5067.501 kb on + strand at 5067.501 kb on + strand at 5067.502 kb on - strand at 5067.502 kb on - strand at 5067.502 kb on - strand at 5067.506 kb on + strand at 5067.530 kb on + strand at 5067.531 kb on - strand at 5067.531 kb on - strand at 5067.553 kb on + strand at 5067.554 kb on - strand at 5067.564 kb on + strand at 5067.574 kb on + strand, within IAI46_23830 at 5067.710 kb on - strand, within IAI46_23830 at 5067.826 kb on + strand, within IAI46_23830 at 5067.843 kb on + strand, within IAI46_23830 at 5067.863 kb on + strand, within IAI46_23830 at 5067.863 kb on + strand, within IAI46_23830 at 5067.864 kb on - strand, within IAI46_23830 at 5067.893 kb on - strand, within IAI46_23830 at 5067.894 kb on + strand, within IAI46_23830 at 5067.976 kb on - strand, within IAI46_23830 at 5068.105 kb on - strand, within IAI46_23830 at 5068.105 kb on - strand, within IAI46_23830 at 5068.183 kb on + strand at 5068.186 kb on + strand at 5068.187 kb on - strand at 5068.207 kb on - strand at 5068.208 kb on + strand at 5068.247 kb on - strand at 5068.261 kb on + strand at 5068.262 kb on - strand at 5068.270 kb on + strand at 5068.333 kb on - strand, within IAI46_23835 at 5068.380 kb on - strand, within IAI46_23835 at 5068.380 kb on - strand, within IAI46_23835 at 5068.443 kb on - strand, within IAI46_23835 at 5068.467 kb on - strand, within IAI46_23835 at 5068.554 kb on + strand, within IAI46_23835 at 5068.589 kb on + strand, within IAI46_23835 at 5068.589 kb on + strand, within IAI46_23835 at 5068.820 kb on + strand at 5068.820 kb on + strand at 5068.820 kb on + strand at 5068.820 kb on + strand at 5068.820 kb on + strand at 5068.821 kb on - strand at 5068.823 kb on + strand at 5068.823 kb on + strand at 5068.823 kb on + strand at 5068.824 kb on - strand at 5068.824 kb on - strand at 5068.824 kb on - strand at 5068.824 kb on - strand at 5068.824 kb on - strand at 5068.830 kb on - strand at 5068.838 kb on + strand at 5068.839 kb on - strand at 5068.873 kb on + strand at 5068.874 kb on - strand at 5068.886 kb on + strand at 5068.886 kb on + strand at 5068.886 kb on + strand at 5068.925 kb on + strand at 5068.925 kb on + strand at 5068.926 kb on - strand at 5068.941 kb on + strand at 5068.942 kb on - strand at 5068.942 kb on - strand at 5068.951 kb on - strand at 5068.954 kb on + strand at 5068.954 kb on + strand at 5068.954 kb on + strand at 5068.954 kb on + strand at 5068.955 kb on - strand at 5068.955 kb on - strand at 5068.955 kb on - strand at 5068.973 kb on + strand at 5068.973 kb on + strand at 5068.973 kb on + strand at 5068.974 kb on - strand at 5068.974 kb on - strand at 5068.974 kb on - strand at 5068.997 kb on + strand at 5068.998 kb on - strand at 5068.998 kb on - strand at 5068.998 kb on - strand at 5069.152 kb on - strand at 5069.152 kb on - strand at 5069.225 kb on + strand, within IAI46_23840 at 5069.225 kb on + strand, within IAI46_23840 at 5069.225 kb on + strand, within IAI46_23840 at 5069.226 kb on - strand, within IAI46_23840 at 5069.226 kb on - strand, within IAI46_23840 at 5069.245 kb on - strand, within IAI46_23840 at 5069.259 kb on + strand, within IAI46_23840 at 5069.259 kb on + strand, within IAI46_23840 at 5069.259 kb on + strand, within IAI46_23840 at 5069.260 kb on - strand, within IAI46_23840 at 5069.306 kb on + strand, within IAI46_23840 at 5069.306 kb on + strand, within IAI46_23840 at 5069.306 kb on + strand, within IAI46_23840 at 5069.326 kb on + strand, within IAI46_23840 at 5069.388 kb on - strand, within IAI46_23840 at 5069.432 kb on + strand, within IAI46_23840 at 5069.489 kb on + strand, within IAI46_23840 at 5069.490 kb on - strand, within IAI46_23840 at 5069.534 kb on + strand, within IAI46_23840 at 5069.535 kb on - strand, within IAI46_23840 at 5069.546 kb on + strand, within IAI46_23840 at 5069.552 kb on + strand, within IAI46_23840 at 5069.552 kb on + strand, within IAI46_23840 at 5069.553 kb on - strand, within IAI46_23840 at 5069.687 kb on + strand, within IAI46_23840 at 5069.757 kb on + strand, within IAI46_23840 at 5069.757 kb on + strand, within IAI46_23840 at 5069.781 kb on + strand, within IAI46_23840 at 5069.782 kb on - strand, within IAI46_23840 at 5069.782 kb on - strand, within IAI46_23840 at 5069.782 kb on - strand, within IAI46_23840 at 5069.802 kb on + strand, within IAI46_23840 at 5069.814 kb on - strand, within IAI46_23840
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, anaerobic remove 5,067,285 + IAI46_23825 0.77 -1.0 5,067,286 - IAI46_23825 0.78 +0.7 5,067,433 + +0.6 5,067,434 - +0.3 5,067,447 - +0.9 5,067,501 + +0.7 5,067,501 + +0.1 5,067,501 + -0.6 5,067,502 - -0.5 5,067,502 - -0.5 5,067,502 - +0.5 5,067,506 + -0.8 5,067,530 + +0.0 5,067,531 - +0.5 5,067,531 - -0.9 5,067,553 + -0.8 5,067,554 - -0.3 5,067,564 + -0.3 5,067,574 + IAI46_23830 0.11 +0.3 5,067,710 - IAI46_23830 0.30 +0.0 5,067,826 + IAI46_23830 0.47 +0.1 5,067,843 + IAI46_23830 0.50 +0.4 5,067,863 + IAI46_23830 0.53 -0.4 5,067,863 + IAI46_23830 0.53 -0.3 5,067,864 - IAI46_23830 0.53 -0.1 5,067,893 - IAI46_23830 0.57 -1.2 5,067,894 + IAI46_23830 0.57 -0.1 5,067,976 - IAI46_23830 0.69 -0.5 5,068,105 - IAI46_23830 0.88 +0.6 5,068,105 - IAI46_23830 0.88 +0.5 5,068,183 + +0.6 5,068,186 + +0.1 5,068,187 - -0.1 5,068,207 - +1.2 5,068,208 + -0.7 5,068,247 - +0.6 5,068,261 + +1.5 5,068,262 - +1.0 5,068,270 + +1.1 5,068,333 - IAI46_23835 0.14 +0.6 5,068,380 - IAI46_23835 0.22 +1.8 5,068,380 - IAI46_23835 0.22 -0.4 5,068,443 - IAI46_23835 0.33 -0.6 5,068,467 - IAI46_23835 0.37 +0.5 5,068,554 + IAI46_23835 0.52 +1.5 5,068,589 + IAI46_23835 0.58 +1.2 5,068,589 + IAI46_23835 0.58 -0.3 5,068,820 + -0.1 5,068,820 + +0.2 5,068,820 + +0.2 5,068,820 + -0.4 5,068,820 + +0.5 5,068,821 - -0.3 5,068,823 + +1.2 5,068,823 + +0.5 5,068,823 + -0.1 5,068,824 - -0.9 5,068,824 - +1.0 5,068,824 - +0.2 5,068,824 - +0.5 5,068,824 - -0.2 5,068,830 - +0.6 5,068,838 + -0.5 5,068,839 - +0.1 5,068,873 + +0.6 5,068,874 - +0.4 5,068,886 + -0.5 5,068,886 + +0.7 5,068,886 + -0.6 5,068,925 + -0.5 5,068,925 + -0.6 5,068,926 - +0.1 5,068,941 + -1.3 5,068,942 - -0.1 5,068,942 - +0.5 5,068,951 - +0.0 5,068,954 + -0.8 5,068,954 + -0.2 5,068,954 + -0.1 5,068,954 + +0.0 5,068,955 - +0.4 5,068,955 - +1.7 5,068,955 - +0.1 5,068,973 + -0.2 5,068,973 + -0.2 5,068,973 + -0.5 5,068,974 - +0.0 5,068,974 - -1.1 5,068,974 - +0.8 5,068,997 + +0.0 5,068,998 - -0.4 5,068,998 - +1.7 5,068,998 - -0.2 5,069,152 - +0.1 5,069,152 - -0.4 5,069,225 + IAI46_23840 0.10 -0.2 5,069,225 + IAI46_23840 0.10 -0.7 5,069,225 + IAI46_23840 0.10 +0.4 5,069,226 - IAI46_23840 0.10 +0.0 5,069,226 - IAI46_23840 0.10 +0.3 5,069,245 - IAI46_23840 0.11 +0.5 5,069,259 + IAI46_23840 0.12 -0.4 5,069,259 + IAI46_23840 0.12 +0.7 5,069,259 + IAI46_23840 0.12 +0.2 5,069,260 - IAI46_23840 0.12 +0.4 5,069,306 + IAI46_23840 0.14 -1.8 5,069,306 + IAI46_23840 0.14 +1.6 5,069,306 + IAI46_23840 0.14 +0.4 5,069,326 + IAI46_23840 0.15 -1.1 5,069,388 - IAI46_23840 0.18 +0.0 5,069,432 + IAI46_23840 0.20 -0.5 5,069,489 + IAI46_23840 0.23 -1.9 5,069,490 - IAI46_23840 0.23 +0.1 5,069,534 + IAI46_23840 0.25 -0.8 5,069,535 - IAI46_23840 0.25 +0.6 5,069,546 + IAI46_23840 0.25 +0.3 5,069,552 + IAI46_23840 0.26 +0.1 5,069,552 + IAI46_23840 0.26 -0.1 5,069,553 - IAI46_23840 0.26 -0.3 5,069,687 + IAI46_23840 0.32 +0.1 5,069,757 + IAI46_23840 0.36 -0.1 5,069,757 + IAI46_23840 0.36 +0.5 5,069,781 + IAI46_23840 0.37 -0.3 5,069,782 - IAI46_23840 0.37 -0.5 5,069,782 - IAI46_23840 0.37 -0.0 5,069,782 - IAI46_23840 0.37 +0.1 5,069,802 + IAI46_23840 0.38 +0.0 5,069,814 - IAI46_23840 0.38 +1.5
Or see this region's nucleotide sequence