Experiment: No stress control, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_23270 and IAI46_23275 are separated by 73 nucleotides IAI46_23275 and IAI46_23280 are separated by 77 nucleotides
IAI46_23270: IAI46_23270 - methionyl-tRNA formyltransferase, at 4,972,097 to 4,973,041
_23270
IAI46_23275: IAI46_23275 - 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB, at 4,973,115 to 4,974,404
_23275
IAI46_23280: IAI46_23280 - Trk system potassium transporter TrkA, at 4,974,482 to 4,975,858
_23280
Position (kb)
4973
4974
4975 Strain fitness (log2 ratio)
-2
-1
0
1 at 4973.020 kb on + strand at 4973.020 kb on + strand at 4973.039 kb on + strand at 4973.039 kb on + strand at 4973.040 kb on - strand at 4973.087 kb on + strand at 4973.109 kb on + strand at 4973.127 kb on + strand at 4973.128 kb on - strand at 4973.128 kb on - strand at 4973.192 kb on + strand at 4973.192 kb on + strand at 4973.254 kb on + strand, within IAI46_23275 at 4973.254 kb on + strand, within IAI46_23275 at 4973.255 kb on - strand, within IAI46_23275 at 4973.255 kb on - strand, within IAI46_23275 at 4973.297 kb on + strand, within IAI46_23275 at 4973.297 kb on + strand, within IAI46_23275 at 4973.298 kb on - strand, within IAI46_23275 at 4973.298 kb on - strand, within IAI46_23275 at 4973.349 kb on + strand, within IAI46_23275 at 4973.349 kb on + strand, within IAI46_23275 at 4973.349 kb on + strand, within IAI46_23275 at 4973.370 kb on + strand, within IAI46_23275 at 4973.371 kb on - strand, within IAI46_23275 at 4973.382 kb on + strand, within IAI46_23275 at 4973.382 kb on + strand, within IAI46_23275 at 4973.382 kb on + strand, within IAI46_23275 at 4973.382 kb on + strand, within IAI46_23275 at 4973.383 kb on - strand, within IAI46_23275 at 4973.383 kb on - strand, within IAI46_23275 at 4973.383 kb on - strand, within IAI46_23275 at 4973.383 kb on - strand, within IAI46_23275 at 4973.383 kb on - strand, within IAI46_23275 at 4973.383 kb on - strand, within IAI46_23275 at 4973.383 kb on - strand, within IAI46_23275 at 4973.384 kb on + strand, within IAI46_23275 at 4973.423 kb on - strand, within IAI46_23275 at 4973.423 kb on - strand, within IAI46_23275 at 4973.476 kb on + strand, within IAI46_23275 at 4973.477 kb on - strand, within IAI46_23275 at 4973.477 kb on - strand, within IAI46_23275 at 4973.528 kb on + strand, within IAI46_23275 at 4973.571 kb on - strand, within IAI46_23275 at 4973.702 kb on + strand, within IAI46_23275 at 4973.740 kb on + strand, within IAI46_23275 at 4973.740 kb on + strand, within IAI46_23275 at 4973.904 kb on - strand, within IAI46_23275 at 4973.933 kb on + strand, within IAI46_23275 at 4973.998 kb on + strand, within IAI46_23275 at 4974.029 kb on + strand, within IAI46_23275 at 4974.029 kb on + strand, within IAI46_23275 at 4974.030 kb on - strand, within IAI46_23275 at 4974.030 kb on - strand, within IAI46_23275 at 4974.030 kb on - strand, within IAI46_23275 at 4974.030 kb on - strand, within IAI46_23275 at 4974.054 kb on - strand, within IAI46_23275 at 4974.182 kb on + strand, within IAI46_23275 at 4974.183 kb on - strand, within IAI46_23275 at 4974.226 kb on + strand, within IAI46_23275 at 4974.226 kb on + strand, within IAI46_23275 at 4974.227 kb on - strand, within IAI46_23275 at 4974.227 kb on - strand, within IAI46_23275 at 4974.227 kb on - strand, within IAI46_23275 at 4974.228 kb on + strand, within IAI46_23275 at 4974.228 kb on + strand, within IAI46_23275 at 4974.228 kb on + strand, within IAI46_23275 at 4974.228 kb on + strand, within IAI46_23275 at 4974.229 kb on - strand, within IAI46_23275 at 4974.229 kb on - strand, within IAI46_23275 at 4974.229 kb on - strand, within IAI46_23275 at 4974.229 kb on - strand, within IAI46_23275 at 4974.234 kb on - strand, within IAI46_23275 at 4974.381 kb on + strand at 4974.386 kb on + strand at 4974.396 kb on - strand at 4974.402 kb on + strand at 4974.406 kb on + strand at 4974.406 kb on + strand at 4974.406 kb on + strand at 4974.754 kb on + strand, within IAI46_23280 at 4974.794 kb on - strand, within IAI46_23280 at 4974.954 kb on + strand, within IAI46_23280
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, anaerobic remove 4,973,020 + -0.2 4,973,020 + -0.0 4,973,039 + +0.0 4,973,039 + +1.1 4,973,040 - +0.1 4,973,087 + -2.4 4,973,109 + -0.1 4,973,127 + +1.1 4,973,128 - +0.3 4,973,128 - +0.7 4,973,192 + +0.1 4,973,192 + -0.1 4,973,254 + IAI46_23275 0.11 +0.4 4,973,254 + IAI46_23275 0.11 -0.2 4,973,255 - IAI46_23275 0.11 -0.7 4,973,255 - IAI46_23275 0.11 +0.8 4,973,297 + IAI46_23275 0.14 +0.1 4,973,297 + IAI46_23275 0.14 +0.4 4,973,298 - IAI46_23275 0.14 +0.1 4,973,298 - IAI46_23275 0.14 +0.1 4,973,349 + IAI46_23275 0.18 -0.0 4,973,349 + IAI46_23275 0.18 +0.2 4,973,349 + IAI46_23275 0.18 +0.3 4,973,370 + IAI46_23275 0.20 +0.4 4,973,371 - IAI46_23275 0.20 -0.9 4,973,382 + IAI46_23275 0.21 -1.1 4,973,382 + IAI46_23275 0.21 +0.8 4,973,382 + IAI46_23275 0.21 -0.2 4,973,382 + IAI46_23275 0.21 +0.0 4,973,383 - IAI46_23275 0.21 -0.2 4,973,383 - IAI46_23275 0.21 +1.1 4,973,383 - IAI46_23275 0.21 +0.4 4,973,383 - IAI46_23275 0.21 +0.2 4,973,383 - IAI46_23275 0.21 -0.9 4,973,383 - IAI46_23275 0.21 -0.2 4,973,383 - IAI46_23275 0.21 +0.3 4,973,384 + IAI46_23275 0.21 +0.3 4,973,423 - IAI46_23275 0.24 -0.7 4,973,423 - IAI46_23275 0.24 +0.3 4,973,476 + IAI46_23275 0.28 -0.3 4,973,477 - IAI46_23275 0.28 -0.1 4,973,477 - IAI46_23275 0.28 -0.0 4,973,528 + IAI46_23275 0.32 -0.3 4,973,571 - IAI46_23275 0.35 +0.1 4,973,702 + IAI46_23275 0.46 -0.1 4,973,740 + IAI46_23275 0.48 +1.5 4,973,740 + IAI46_23275 0.48 +0.5 4,973,904 - IAI46_23275 0.61 -0.6 4,973,933 + IAI46_23275 0.63 +1.2 4,973,998 + IAI46_23275 0.68 +1.5 4,974,029 + IAI46_23275 0.71 -1.1 4,974,029 + IAI46_23275 0.71 +0.3 4,974,030 - IAI46_23275 0.71 +0.2 4,974,030 - IAI46_23275 0.71 +1.1 4,974,030 - IAI46_23275 0.71 -0.0 4,974,030 - IAI46_23275 0.71 -0.1 4,974,054 - IAI46_23275 0.73 +1.2 4,974,182 + IAI46_23275 0.83 +0.5 4,974,183 - IAI46_23275 0.83 +0.6 4,974,226 + IAI46_23275 0.86 -0.2 4,974,226 + IAI46_23275 0.86 +0.1 4,974,227 - IAI46_23275 0.86 +0.2 4,974,227 - IAI46_23275 0.86 -0.4 4,974,227 - IAI46_23275 0.86 +0.3 4,974,228 + IAI46_23275 0.86 +0.4 4,974,228 + IAI46_23275 0.86 -0.1 4,974,228 + IAI46_23275 0.86 -0.6 4,974,228 + IAI46_23275 0.86 +0.0 4,974,229 - IAI46_23275 0.86 -0.2 4,974,229 - IAI46_23275 0.86 +0.8 4,974,229 - IAI46_23275 0.86 -1.6 4,974,229 - IAI46_23275 0.86 +0.5 4,974,234 - IAI46_23275 0.87 -0.2 4,974,381 + -1.2 4,974,386 + -0.4 4,974,396 - +0.7 4,974,402 + +0.1 4,974,406 + -0.3 4,974,406 + -0.0 4,974,406 + -0.1 4,974,754 + IAI46_23280 0.20 +1.4 4,974,794 - IAI46_23280 0.23 +0.4 4,974,954 + IAI46_23280 0.34 +0.4
Or see this region's nucleotide sequence