Strain Fitness in Serratia liquefaciens MT49 around IAI46_22520

Experiment: No stress control, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	No stress control, anaerobic
4,791,229	+				+1.4
4,791,229	+				-0.0
4,791,230	-				+0.0
4,791,331	+				+0.1
4,791,331	+				-0.3
4,791,332	-				-0.5
4,791,332	-				-0.1
4,791,332	-				-0.7
4,791,332	-				+0.4
4,791,336	-				-0.1
4,791,336	-				-1.0
4,791,336	-				+0.0
4,791,346	+				-0.6
4,791,346	+				+0.9
4,791,346	+				-0.9
4,791,346	+				+0.2
4,791,347	-				-0.1
4,791,347	-				+0.5
4,791,347	-				+0.2
4,791,347	-				+0.7
4,791,347	-				-0.3
4,791,347	-				-0.7
4,791,347	-				-0.7
4,791,347	-				+0.5
4,791,347	-				-0.4
4,791,347	-				-0.1
4,791,349	-				-0.3
4,791,374	+				-1.4
4,791,374	+				+0.4
4,791,375	-				+0.2
4,791,375	-				+0.0
4,791,375	-				+0.3
4,791,375	-				+0.2
4,791,375	-				-0.0
4,791,375	-				-0.2
4,791,378	+				+1.1
4,791,379	-				+0.0
4,791,379	-				-0.1
4,791,438	+				+0.3
4,791,462	+				+0.2
4,791,462	+				+0.5
4,791,463	-				+0.8
4,791,463	-				-0.1
4,791,463	-				+0.2
4,791,463	-				+0.2
4,791,569	+		IAI46_22515	0.12	+1.2
4,791,569	+		IAI46_22515	0.12	-1.7
4,791,570	-		IAI46_22515	0.12	-1.5
4,791,570	-		IAI46_22515	0.12	-0.4
4,791,571	+		IAI46_22515	0.12	+0.9
4,791,571	+		IAI46_22515	0.12	+0.2
4,791,571	+		IAI46_22515	0.12	+0.6
4,791,571	+		IAI46_22515	0.12	+1.2
4,791,571	+		IAI46_22515	0.12	-0.2
4,791,571	+		IAI46_22515	0.12	-0.9
4,791,571	+		IAI46_22515	0.12	+0.3
4,791,571	+		IAI46_22515	0.12	+1.0
4,791,572	-		IAI46_22515	0.12	+0.8
4,791,572	-		IAI46_22515	0.12	-1.1
4,791,572	-		IAI46_22515	0.12	+0.0
4,791,572	-		IAI46_22515	0.12	+0.4
4,791,572	-		IAI46_22515	0.12	+0.7
4,791,572	-		IAI46_22515	0.12	-0.7
4,791,572	-		IAI46_22515	0.12	+0.3
4,791,572	-		IAI46_22515	0.12	-0.4
4,791,572	-		IAI46_22515	0.12	+1.5
4,791,572	-		IAI46_22515	0.12	+1.1
4,791,572	-		IAI46_22515	0.12	-0.7
4,791,668	+		IAI46_22515	0.25	+0.4
4,791,668	+		IAI46_22515	0.25	+0.2
4,791,668	+		IAI46_22515	0.25	-0.6
4,791,669	-		IAI46_22515	0.25	-0.6
4,791,700	+		IAI46_22515	0.29	+0.9
4,791,701	-		IAI46_22515	0.29	-0.2
4,791,706	+		IAI46_22515	0.30	-1.5
4,791,706	+		IAI46_22515	0.30	+0.8
4,791,707	-		IAI46_22515	0.30	-0.8
4,791,743	-		IAI46_22515	0.35	+0.8
4,791,755	+		IAI46_22515	0.37	-1.2
4,791,756	-		IAI46_22515	0.37	-1.4
4,791,964	-		IAI46_22515	0.65	+0.4
4,792,002	-		IAI46_22515	0.70	+0.6
4,792,054	+		IAI46_22515	0.77	-0.8
4,792,141	+		IAI46_22515	0.89	+0.1
4,792,142	-		IAI46_22515	0.89	-0.4
4,792,142	-		IAI46_22515	0.89	+0.4
4,792,142	-		IAI46_22515	0.89	+0.9
4,792,142	-		IAI46_22515	0.89	+0.2
4,792,202	-				-0.3
4,792,205	-				-0.5
4,792,205	-				-0.3
4,792,205	-				-0.1
4,792,208	+				-1.1
4,792,208	+				-0.1
4,792,209	-				+0.6
4,792,209	-				+0.3
4,792,209	-				-0.5
4,792,209	-				+0.8
4,792,209	-				-0.4
4,792,249	+				+1.0
4,792,250	-				+0.5
4,792,253	-				+0.7
4,792,253	-				+0.6
4,792,321	+				-0.6
4,792,329	+				-1.3
4,792,329	+				+0.4
4,792,341	+		IAI46_22520	0.11	+0.1
4,792,342	-		IAI46_22520	0.11	+0.8
4,792,342	-		IAI46_22520	0.11	-0.7
4,792,342	-		IAI46_22520	0.11	+0.4
4,792,342	-		IAI46_22520	0.11	-0.1
4,792,383	+		IAI46_22520	0.15	+0.1
4,792,383	+		IAI46_22520	0.15	-0.2
4,792,435	+		IAI46_22520	0.19	+0.1
4,792,436	-		IAI46_22520	0.19	-0.2
4,792,436	-		IAI46_22520	0.19	+1.4
4,792,565	+		IAI46_22520	0.31	+0.1
4,792,653	+		IAI46_22520	0.39	+0.1
4,792,714	-		IAI46_22520	0.44	+0.0
4,792,714	-		IAI46_22520	0.44	+0.7
4,792,740	+		IAI46_22520	0.46	-0.9
4,792,743	+		IAI46_22520	0.47	-2.6
4,792,744	-		IAI46_22520	0.47	-0.3
4,792,744	-		IAI46_22520	0.47	+0.3
4,792,744	-		IAI46_22520	0.47	+0.9
4,792,792	+		IAI46_22520	0.51	+0.1
4,792,793	-		IAI46_22520	0.51	-0.9
4,792,793	-		IAI46_22520	0.51	-0.2
4,792,864	+		IAI46_22520	0.58	-0.4
4,792,864	+		IAI46_22520	0.58	-0.6
4,792,864	+		IAI46_22520	0.58	+0.3
4,792,865	-		IAI46_22520	0.58	+1.7
4,792,866	+		IAI46_22520	0.58	+0.7
4,792,866	+		IAI46_22520	0.58	-0.1
4,792,867	-		IAI46_22520	0.58	+0.2
4,792,891	+		IAI46_22520	0.60	+1.0
4,793,002	+		IAI46_22520	0.70	-0.3
4,793,038	+		IAI46_22520	0.73	+1.2
4,793,038	+		IAI46_22520	0.73	-0.1
4,793,041	+		IAI46_22520	0.73	-0.4
4,793,042	-		IAI46_22520	0.73	+1.0
4,793,042	-		IAI46_22520	0.73	+0.3
4,793,042	-		IAI46_22520	0.73	+0.2
4,793,172	+		IAI46_22520	0.85	+0.6
4,793,172	+		IAI46_22520	0.85	+0.3
4,793,172	+		IAI46_22520	0.85	+0.2
4,793,172	+		IAI46_22520	0.85	+0.4
4,793,173	-		IAI46_22520	0.85	-0.2
4,793,173	-		IAI46_22520	0.85	-1.0
4,793,173	-		IAI46_22520	0.85	-0.9
4,793,173	-		IAI46_22520	0.85	+0.1
4,793,212	-		IAI46_22520	0.89	-0.7
4,793,212	-		IAI46_22520	0.89	+0.4
4,793,240	+				-0.1
4,793,241	-				-0.2
4,793,364	+				+0.1
4,793,365	-				+0.8
4,793,502	+		IAI46_22525	0.16	+0.7
4,793,513	+		IAI46_22525	0.17	-2.3
4,793,514	-		IAI46_22525	0.17	-1.7
4,793,650	+		IAI46_22525	0.29	+0.7
4,793,650	+		IAI46_22525	0.29	+0.6
4,793,650	+		IAI46_22525	0.29	-1.0
4,793,651	-		IAI46_22525	0.29	-0.0
4,793,654	+		IAI46_22525	0.29	-0.2
4,793,655	-		IAI46_22525	0.29	+0.9
4,793,669	+		IAI46_22525	0.30	+1.0
4,793,670	-		IAI46_22525	0.31	+0.5
4,793,670	-		IAI46_22525	0.31	+1.0
4,793,692	-		IAI46_22525	0.32	-0.2
4,793,764	-		IAI46_22525	0.39	+1.1
4,793,777	+		IAI46_22525	0.40	+0.2
4,793,777	+		IAI46_22525	0.40	-0.4
4,793,830	+		IAI46_22525	0.45	+0.8
4,793,872	-		IAI46_22525	0.48	-0.4
4,793,872	-		IAI46_22525	0.48	+0.2
4,793,904	-		IAI46_22525	0.51	-0.1
4,793,927	+		IAI46_22525	0.53	+0.5
4,793,927	+		IAI46_22525	0.53	-0.3
4,793,927	+		IAI46_22525	0.53	+0.2
4,794,164	+		IAI46_22525	0.74	-0.1
4,794,165	-		IAI46_22525	0.74	+0.5
4,794,166	+		IAI46_22525	0.74	+0.3
4,794,166	+		IAI46_22525	0.74	+0.3
4,794,167	-		IAI46_22525	0.74	-1.9
4,794,259	+		IAI46_22525	0.82	+0.3
4,794,259	+		IAI46_22525	0.82	+0.3
4,794,260	-		IAI46_22525	0.82	+0.0
4,794,278	-		IAI46_22525	0.84	-0.2
4,794,278	-		IAI46_22525	0.84	+0.9