Experiment: No stress control, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_21920 and IAI46_21925 are separated by 47 nucleotides IAI46_21925 and IAI46_21930 overlap by 1 nucleotides IAI46_21930 and IAI46_21935 are separated by 27 nucleotides
IAI46_21920: IAI46_21920 - DNA topoisomerase IV subunit B, at 4,666,394 to 4,668,289
_21920
IAI46_21925: IAI46_21925 - esterase YqiA, at 4,668,337 to 4,668,921
_21925
IAI46_21930: IAI46_21930 - 3',5'-cyclic-AMP phosphodiesterase, at 4,668,921 to 4,669,748
_21930
IAI46_21935: IAI46_21935 - DUF1249 family protein, at 4,669,776 to 4,670,201
_21935
Position (kb) 4668
4669 Strain fitness (log2 ratio) -2
-1
0
1 at 4668.298 kb on - strand at 4668.381 kb on - strand at 4668.444 kb on - strand, within IAI46_21925 at 4668.444 kb on - strand, within IAI46_21925 at 4668.569 kb on - strand, within IAI46_21925 at 4668.575 kb on + strand, within IAI46_21925 at 4668.575 kb on + strand, within IAI46_21925 at 4668.575 kb on + strand, within IAI46_21925 at 4668.576 kb on - strand, within IAI46_21925 at 4668.576 kb on - strand, within IAI46_21925 at 4668.576 kb on - strand, within IAI46_21925 at 4668.576 kb on - strand, within IAI46_21925 at 4668.576 kb on - strand, within IAI46_21925 at 4668.698 kb on + strand, within IAI46_21925 at 4668.698 kb on + strand, within IAI46_21925 at 4668.701 kb on + strand, within IAI46_21925 at 4668.701 kb on + strand, within IAI46_21925 at 4668.875 kb on + strand at 4668.889 kb on - strand at 4668.902 kb on + strand at 4668.902 kb on + strand at 4668.903 kb on - strand at 4668.903 kb on - strand at 4668.912 kb on + strand at 4668.912 kb on + strand at 4668.912 kb on + strand at 4668.913 kb on - strand at 4669.016 kb on - strand, within IAI46_21930 at 4669.082 kb on + strand, within IAI46_21930 at 4669.139 kb on + strand, within IAI46_21930 at 4669.139 kb on + strand, within IAI46_21930 at 4669.139 kb on + strand, within IAI46_21930 at 4669.140 kb on - strand, within IAI46_21930 at 4669.140 kb on - strand, within IAI46_21930 at 4669.274 kb on + strand, within IAI46_21930 at 4669.275 kb on - strand, within IAI46_21930 at 4669.275 kb on - strand, within IAI46_21930 at 4669.275 kb on - strand, within IAI46_21930 at 4669.276 kb on + strand, within IAI46_21930 at 4669.289 kb on - strand, within IAI46_21930 at 4669.325 kb on - strand, within IAI46_21930 at 4669.325 kb on - strand, within IAI46_21930 at 4669.509 kb on - strand, within IAI46_21930 at 4669.624 kb on + strand, within IAI46_21930 at 4669.633 kb on + strand, within IAI46_21930 at 4669.634 kb on - strand, within IAI46_21930 at 4669.634 kb on - strand, within IAI46_21930 at 4669.634 kb on - strand, within IAI46_21930 at 4669.637 kb on + strand, within IAI46_21930 at 4669.638 kb on - strand, within IAI46_21930 at 4669.689 kb on + strand at 4669.689 kb on + strand at 4669.763 kb on + strand at 4669.763 kb on + strand at 4669.763 kb on + strand at 4669.764 kb on - strand at 4669.816 kb on + strand at 4669.888 kb on + strand, within IAI46_21935 at 4669.895 kb on - strand, within IAI46_21935 at 4669.912 kb on + strand, within IAI46_21935 at 4669.912 kb on + strand, within IAI46_21935
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, anaerobic remove 4,668,298 - -0.8 4,668,381 - +0.6 4,668,444 - IAI46_21925 0.18 -0.1 4,668,444 - IAI46_21925 0.18 -0.6 4,668,569 - IAI46_21925 0.40 +1.0 4,668,575 + IAI46_21925 0.41 +0.5 4,668,575 + IAI46_21925 0.41 +0.5 4,668,575 + IAI46_21925 0.41 +0.8 4,668,576 - IAI46_21925 0.41 +0.6 4,668,576 - IAI46_21925 0.41 -0.5 4,668,576 - IAI46_21925 0.41 -0.2 4,668,576 - IAI46_21925 0.41 -0.3 4,668,576 - IAI46_21925 0.41 -0.0 4,668,698 + IAI46_21925 0.62 +0.3 4,668,698 + IAI46_21925 0.62 -0.8 4,668,701 + IAI46_21925 0.62 -0.4 4,668,701 + IAI46_21925 0.62 +1.4 4,668,875 + -0.6 4,668,889 - +0.6 4,668,902 + -0.9 4,668,902 + -0.3 4,668,903 - -2.1 4,668,903 - +0.5 4,668,912 + +0.1 4,668,912 + -0.3 4,668,912 + -0.0 4,668,913 - +0.1 4,669,016 - IAI46_21930 0.11 +0.3 4,669,082 + IAI46_21930 0.19 +0.2 4,669,139 + IAI46_21930 0.26 +0.8 4,669,139 + IAI46_21930 0.26 -0.4 4,669,139 + IAI46_21930 0.26 -0.8 4,669,140 - IAI46_21930 0.26 -0.4 4,669,140 - IAI46_21930 0.26 -0.5 4,669,274 + IAI46_21930 0.43 +0.2 4,669,275 - IAI46_21930 0.43 -0.4 4,669,275 - IAI46_21930 0.43 -0.4 4,669,275 - IAI46_21930 0.43 +0.4 4,669,276 + IAI46_21930 0.43 +0.6 4,669,289 - IAI46_21930 0.44 +0.1 4,669,325 - IAI46_21930 0.49 -1.7 4,669,325 - IAI46_21930 0.49 +0.2 4,669,509 - IAI46_21930 0.71 +1.0 4,669,624 + IAI46_21930 0.85 +0.3 4,669,633 + IAI46_21930 0.86 +0.8 4,669,634 - IAI46_21930 0.86 -0.2 4,669,634 - IAI46_21930 0.86 +0.2 4,669,634 - IAI46_21930 0.86 +0.1 4,669,637 + IAI46_21930 0.86 -0.8 4,669,638 - IAI46_21930 0.87 +0.4 4,669,689 + -0.6 4,669,689 + -0.1 4,669,763 + +0.2 4,669,763 + +0.4 4,669,763 + -0.8 4,669,764 - -1.2 4,669,816 + -0.3 4,669,888 + IAI46_21935 0.26 +0.6 4,669,895 - IAI46_21935 0.28 -0.8 4,669,912 + IAI46_21935 0.32 -0.4 4,669,912 + IAI46_21935 0.32 +0.1
Or see this region's nucleotide sequence