Strain Fitness in Serratia liquefaciens MT49 around IAI46_21660

Experiment: No stress control, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	No stress control, anaerobic
4,595,488	-		IAI46_21650	0.25	+0.6
4,595,547	-		IAI46_21650	0.37	+0.4
4,595,548	+		IAI46_21650	0.37	+1.0
4,595,672	+		IAI46_21650	0.60	-0.1
4,595,672	+		IAI46_21650	0.60	+0.9
4,595,673	-		IAI46_21650	0.60	+1.6
4,595,673	-		IAI46_21650	0.60	-1.9
4,595,673	-		IAI46_21650	0.60	-0.2
4,595,676	+		IAI46_21650	0.61	-0.2
4,595,682	-		IAI46_21650	0.62	-0.9
4,595,705	+		IAI46_21650	0.66	+0.0
4,595,705	+		IAI46_21650	0.66	-0.1
4,595,706	-		IAI46_21650	0.66	-0.2
4,595,706	-		IAI46_21650	0.66	+0.1
4,595,751	-		IAI46_21650	0.75	+0.4
4,595,814	-		IAI46_21650	0.87	+0.6
4,595,814	-		IAI46_21650	0.87	+0.3
4,595,838	-				+0.7
4,595,838	-				+0.4
4,595,873	-				+1.6
4,595,914	-				-0.3
4,595,936	-				+0.4
4,595,936	-				-0.8
4,595,963	-				+0.3
4,595,963	-				+1.0
4,595,964	+				+0.7
4,595,967	+				-0.7
4,596,013	+				-0.0
4,596,139	-		IAI46_21655	0.34	+0.7
4,596,150	+		IAI46_21655	0.37	-0.1
4,596,151	-		IAI46_21655	0.37	+1.0
4,596,177	-		IAI46_21655	0.43	+0.6
4,596,429	-				-0.6
4,596,461	+				-0.4
4,596,461	+				+1.0
4,596,461	+				-1.3
4,596,462	-				-0.6
4,596,487	+				+0.4
4,596,487	+				-0.1
4,596,490	-				+0.6
4,596,498	+				-0.9
4,596,537	+				+1.1
4,596,538	-				-0.8
4,596,547	+				+0.4
4,596,559	+				+1.3
4,596,566	-				-0.9
4,596,627	+				+0.2
4,596,648	+				+0.1
4,596,649	-				+0.2
4,596,673	+				-0.5
4,596,673	+				+0.6
4,596,673	+				-0.0
4,596,674	-				-0.5
4,596,674	-				-1.2
4,596,674	-				+0.2
4,596,674	-				-0.7
4,596,674	-				-0.8
4,596,674	-				+0.3
4,596,674	-				-0.7
4,596,675	+				+1.2
4,596,675	+				-0.5
4,596,675	+				+0.8
4,596,676	-				-1.2
4,596,676	-				+0.6
4,596,676	-				-1.1
4,596,679	+				+0.2
4,596,679	+				-0.1
4,596,680	-				-1.1
4,596,692	-				-0.0
4,596,726	+				+0.6
4,596,727	-				-0.2
4,596,734	-				+0.7
4,596,764	+				-1.0
4,596,765	-				+1.3
4,596,765	-				+0.8
4,596,765	-				+0.8
4,596,765	-				+0.5
4,596,765	-				-0.3
4,596,765	-				-0.3
4,596,819	+				+0.6
4,596,820	-				+0.5
4,596,820	-				+0.5
4,596,821	+				+0.2
4,596,821	+				-0.9
4,596,821	+				+0.2
4,596,822	-				+0.4
4,596,822	-				+1.1
4,596,822	-				-0.5
4,596,825	+				-0.9
4,596,825	+				+0.3
4,596,825	+				+0.6
4,596,825	+				-0.2
4,596,825	+				+0.3
4,596,825	+				-0.7
4,596,826	-				+0.4
4,596,826	-				-0.0
4,596,826	-				+0.1
4,596,826	-				-0.9
4,596,873	+				+0.1
4,596,943	+				+0.1
4,596,945	+				-0.8
4,596,946	-				+0.1
4,596,955	-				-0.9
4,596,955	-				+0.3
4,596,966	+				-0.4
4,596,979	-				+1.4
4,596,979	-				-0.3
4,597,060	-				+0.6
4,597,150	+				+1.0
4,597,150	+				-0.4
4,597,151	-				-0.0
4,597,151	-				+0.5
4,597,151	-				+0.9
4,597,240	-				-0.3
4,597,273	+				+0.4
4,597,273	+				+1.6
4,597,274	-				+1.6
4,597,274	-				-0.7
4,597,290	-				-0.4
4,597,290	-				+0.8
4,597,290	-				-1.0
4,597,368	+				+0.3
4,597,392	+		IAI46_21660	0.10	-0.2
4,597,397	+		IAI46_21660	0.10	-0.0
4,597,398	-		IAI46_21660	0.10	-0.5
4,597,452	+		IAI46_21660	0.11	+0.7
4,597,452	+		IAI46_21660	0.11	-0.8
4,597,534	-		IAI46_21660	0.12	+0.5
4,597,589	-		IAI46_21660	0.12	+0.1
4,597,589	-		IAI46_21660	0.12	-0.0
4,597,676	-		IAI46_21660	0.13	+0.0
4,597,882	+		IAI46_21660	0.15	+1.7
4,597,882	+		IAI46_21660	0.15	+0.1
4,597,883	-		IAI46_21660	0.15	-0.7
4,597,998	+		IAI46_21660	0.16	+0.1
4,598,007	+		IAI46_21660	0.17	+0.7
4,598,008	-		IAI46_21660	0.17	+0.7
4,598,008	-		IAI46_21660	0.17	-0.4
4,598,078	+		IAI46_21660	0.17	+1.1
4,598,292	+		IAI46_21660	0.20	+1.6
4,598,292	+		IAI46_21660	0.20	-0.1
4,598,400	+		IAI46_21660	0.21	-0.2
4,598,691	-		IAI46_21660	0.24	-0.3
4,598,773	+		IAI46_21660	0.25	+0.8
4,598,796	+		IAI46_21660	0.25	-0.9
4,599,033	+		IAI46_21660	0.27	-0.0
4,599,034	-		IAI46_21660	0.27	+0.0
4,599,036	+		IAI46_21660	0.27	+0.1
4,599,064	+		IAI46_21660	0.28	+1.2
4,599,138	-		IAI46_21660	0.28	-0.7
4,599,318	+		IAI46_21660	0.30	-1.5
4,599,319	-		IAI46_21660	0.30	-0.6
4,599,319	-		IAI46_21660	0.30	-0.1
4,599,319	-		IAI46_21660	0.30	+0.2
4,599,321	+		IAI46_21660	0.30	+0.4
4,599,322	-		IAI46_21660	0.30	-0.1
4,599,340	-		IAI46_21660	0.31	-0.1
4,599,465	+		IAI46_21660	0.32	-0.4
4,599,466	-		IAI46_21660	0.32	+0.7
4,599,466	-		IAI46_21660	0.32	+0.2
4,599,466	-		IAI46_21660	0.32	+1.0
4,599,531	+		IAI46_21660	0.33	+0.9
4,599,532	-		IAI46_21660	0.33	-0.7
4,599,532	-		IAI46_21660	0.33	-1.1
4,599,535	-		IAI46_21660	0.33	-1.2
4,599,720	+		IAI46_21660	0.35	+0.4
4,599,794	+		IAI46_21660	0.35	+0.9
4,599,794	+		IAI46_21660	0.35	+0.1
4,599,794	+		IAI46_21660	0.35	-0.6
4,599,794	+		IAI46_21660	0.35	-0.0
4,599,794	+		IAI46_21660	0.35	+0.3
4,599,794	+		IAI46_21660	0.35	+1.0
4,599,795	-		IAI46_21660	0.35	+0.5
4,599,795	-		IAI46_21660	0.35	+1.1
4,599,795	-		IAI46_21660	0.35	+0.5
4,599,795	-		IAI46_21660	0.35	+0.3
4,599,795	-		IAI46_21660	0.35	-0.5
4,599,795	-		IAI46_21660	0.35	-0.4
4,599,795	-		IAI46_21660	0.35	+0.1
4,599,795	-		IAI46_21660	0.35	-0.3
4,599,868	-		IAI46_21660	0.36	+0.5
4,599,885	+		IAI46_21660	0.36	-0.2
4,599,939	+		IAI46_21660	0.37	+1.1
4,599,945	+		IAI46_21660	0.37	+1.6
4,599,945	+		IAI46_21660	0.37	+0.3
4,600,047	+		IAI46_21660	0.38	+0.4
4,600,148	+		IAI46_21660	0.39	-0.7
4,600,221	+		IAI46_21660	0.40	-0.5
4,600,222	-		IAI46_21660	0.40	-0.2
4,600,279	-		IAI46_21660	0.40	+0.4
4,600,280	+		IAI46_21660	0.40	+0.9
4,600,281	-		IAI46_21660	0.40	+0.1
4,600,281	-		IAI46_21660	0.40	-0.1
4,600,355	+		IAI46_21660	0.41	-0.7
4,600,406	+		IAI46_21660	0.42	+0.3
4,600,406	+		IAI46_21660	0.42	-0.3
4,600,406	+		IAI46_21660	0.42	+0.2
4,600,526	+		IAI46_21660	0.43	+0.1
4,600,633	-		IAI46_21660	0.44	+0.6
4,600,678	+		IAI46_21660	0.45	+0.2
4,600,735	-		IAI46_21660	0.45	+0.3
4,600,786	-		IAI46_21660	0.46	-1.1
4,600,827	+		IAI46_21660	0.46	-0.6
4,600,828	-		IAI46_21660	0.46	+0.6
4,600,828	-		IAI46_21660	0.46	-1.2
4,600,899	+		IAI46_21660	0.47	-0.4
4,600,900	-		IAI46_21660	0.47	+2.1
4,600,901	+		IAI46_21660	0.47	-1.4
4,600,901	+		IAI46_21660	0.47	-0.4
4,600,901	+		IAI46_21660	0.47	-0.0
4,600,902	-		IAI46_21660	0.47	-0.5
4,600,902	-		IAI46_21660	0.47	-1.7
4,600,902	-		IAI46_21660	0.47	+0.0
4,600,902	-		IAI46_21660	0.47	+0.5
4,600,927	-		IAI46_21660	0.47	+0.3
4,600,932	+		IAI46_21660	0.47	+0.2
4,600,933	-		IAI46_21660	0.47	+0.7
4,600,956	-		IAI46_21660	0.48	-0.3
4,600,956	-		IAI46_21660	0.48	-1.5
4,601,010	+		IAI46_21660	0.48	-0.4
4,601,028	+		IAI46_21660	0.48	+0.5
4,601,165	+		IAI46_21660	0.50	-0.4
4,601,172	-		IAI46_21660	0.50	-0.2
4,601,194	-		IAI46_21660	0.50	+0.4
4,601,194	-		IAI46_21660	0.50	+0.7
4,601,214	+		IAI46_21660	0.50	+1.2
4,601,306	+		IAI46_21660	0.51	-0.6
4,601,346	+		IAI46_21660	0.52	-0.9
4,601,349	+		IAI46_21660	0.52	+0.2
4,601,350	-		IAI46_21660	0.52	-0.5
4,601,389	-		IAI46_21660	0.52	-0.2
4,601,504	+		IAI46_21660	0.53	+0.5
4,601,504	+		IAI46_21660	0.53	-0.6
4,601,505	-		IAI46_21660	0.53	-0.5
4,601,505	-		IAI46_21660	0.53	+0.6
4,601,522	+		IAI46_21660	0.54	-0.1
4,601,523	-		IAI46_21660	0.54	-0.1
4,601,527	-		IAI46_21660	0.54	+0.1
4,601,527	-		IAI46_21660	0.54	-0.7
4,601,527	-		IAI46_21660	0.54	-0.7
4,601,605	-		IAI46_21660	0.54	-0.1
4,601,628	+		IAI46_21660	0.55	+0.5
4,601,640	-		IAI46_21660	0.55	-0.1
4,601,644	-		IAI46_21660	0.55	-0.7
4,601,644	-		IAI46_21660	0.55	+0.6
4,601,670	+		IAI46_21660	0.55	-0.1
4,601,688	+		IAI46_21660	0.55	+0.0
4,601,689	-		IAI46_21660	0.55	-0.1
4,601,711	+		IAI46_21660	0.56	-0.2
4,601,711	+		IAI46_21660	0.56	+0.3
4,601,712	-		IAI46_21660	0.56	-0.7
4,601,712	-		IAI46_21660	0.56	-0.1
4,601,724	+		IAI46_21660	0.56	+0.4
4,601,724	+		IAI46_21660	0.56	-0.6
4,601,758	+		IAI46_21660	0.56	-0.0
4,601,787	+		IAI46_21660	0.56	+0.4
4,601,788	-		IAI46_21660	0.56	-0.1
4,601,923	+		IAI46_21660	0.58	+1.4
4,601,923	+		IAI46_21660	0.58	+1.1
4,601,923	+		IAI46_21660	0.58	+0.7
4,601,924	-		IAI46_21660	0.58	+0.3
4,601,924	-		IAI46_21660	0.58	-0.9
4,601,924	-		IAI46_21660	0.58	+0.1
4,602,105	+		IAI46_21660	0.60	-0.4
4,602,105	+		IAI46_21660	0.60	-0.2
4,602,106	-		IAI46_21660	0.60	-2.2
4,602,120	+		IAI46_21660	0.60	-0.5
4,602,465	+		IAI46_21660	0.63	-0.3
4,602,465	+		IAI46_21660	0.63	+0.1
4,602,496	-		IAI46_21660	0.64	+0.0
4,602,592	-		IAI46_21660	0.65	+0.1
4,602,615	+		IAI46_21660	0.65	-0.6
4,602,616	-		IAI46_21660	0.65	-0.3
4,602,616	-		IAI46_21660	0.65	+0.8
4,602,817	+		IAI46_21660	0.67	-1.0
4,602,818	-		IAI46_21660	0.67	-0.5
4,602,855	+		IAI46_21660	0.68	+0.9
4,602,856	-		IAI46_21660	0.68	-1.0
4,602,865	-		IAI46_21660	0.68	-0.9
4,602,933	+		IAI46_21660	0.68	+0.3
4,602,934	-		IAI46_21660	0.68	+1.5
4,603,069	-		IAI46_21660	0.70	+0.8
4,603,101	+		IAI46_21660	0.70	-0.1
4,603,419	+		IAI46_21660	0.73	+0.5
4,603,578	+		IAI46_21660	0.75	+0.4
4,603,584	+		IAI46_21660	0.75	+1.1
4,603,893	+		IAI46_21660	0.78	+0.5
4,604,076	+		IAI46_21660	0.80	-0.2
4,604,077	-		IAI46_21660	0.80	-1.6
4,604,125	-		IAI46_21660	0.81	+0.4
4,604,182	+		IAI46_21660	0.82	+0.4
4,604,182	+		IAI46_21660	0.82	-0.2
4,604,182	+		IAI46_21660	0.82	-1.3
4,604,183	-		IAI46_21660	0.82	-0.6
4,604,186	+		IAI46_21660	0.82	+0.1
4,604,187	-		IAI46_21660	0.82	+0.1
4,604,355	+		IAI46_21660	0.83	+0.2
4,604,356	-		IAI46_21660	0.83	+0.1
4,604,444	-		IAI46_21660	0.84	+0.7
4,604,457	+		IAI46_21660	0.84	-0.2
4,604,457	+		IAI46_21660	0.84	+0.5
4,604,458	-		IAI46_21660	0.84	-0.4
4,604,805	+		IAI46_21660	0.88	+0.1
4,604,836	+		IAI46_21660	0.88	-0.0
4,604,938	-		IAI46_21660	0.89	+0.3
4,605,065	+				-0.9
4,605,066	-				-0.4
4,605,069	+				-0.3
4,605,069	+				-0.4
4,605,070	-				+1.5
4,605,081	+				-0.0
4,605,373	-				+0.1
4,605,393	+				-0.3
4,605,393	+				+0.2
4,605,393	+				+1.2
4,605,448	-				+0.7
4,605,448	-				-1.4
4,605,449	+				+0.1
4,605,449	+				+0.7
4,605,449	+				-0.1
4,605,450	-				+1.3
4,605,450	-				-1.0
4,605,617	+				-0.2
4,605,617	+				+0.3
4,605,618	-				-0.0
4,605,618	-				+0.3
4,605,621	+				+0.6
4,605,806	-				-0.7
4,605,806	-				-0.2
4,605,822	+				-0.0
4,605,823	-				-0.5
4,605,918	+				-1.3
4,606,207	+		IAI46_21665	0.48	-0.0
4,606,308	+		IAI46_21665	0.67	+0.5
4,606,308	+		IAI46_21665	0.67	+0.0
4,606,308	+		IAI46_21665	0.67	-0.3
4,606,308	+		IAI46_21665	0.67	+0.5
4,606,308	+		IAI46_21665	0.67	+0.4
4,606,308	+		IAI46_21665	0.67	-0.9
4,606,309	-		IAI46_21665	0.68	+0.9
4,606,309	-		IAI46_21665	0.68	+0.1
4,606,309	-		IAI46_21665	0.68	-0.1
4,606,309	-		IAI46_21665	0.68	+0.1
4,606,309	-		IAI46_21665	0.68	+0.5
4,606,472	+				+0.2
4,606,496	-				-0.4
4,606,512	-				+0.1
4,606,582	+				+0.2
4,606,660	+				-0.6
4,606,678	+		IAI46_21670	0.11	-0.1
4,606,693	+		IAI46_21670	0.12	+0.7
4,606,923	-		IAI46_21670	0.25	+0.3
4,606,923	-		IAI46_21670	0.25	-0.7