Experiment: No stress control, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_21150 and IAI46_21155 are separated by 126 nucleotides IAI46_21155 and IAI46_21160 are separated by 379 nucleotides IAI46_21160 and IAI46_21165 are separated by 1 nucleotides
IAI46_21150: IAI46_21150 - methionine adenosyltransferase, at 4,479,314 to 4,480,468
_21150
IAI46_21155: IAI46_21155 - Hok/Gef family protein, at 4,480,595 to 4,480,747
_21155
IAI46_21160: IAI46_21160 - helix-turn-helix domain-containing protein, at 4,481,127 to 4,481,411
_21160
IAI46_21165: IAI46_21165 - type II toxin-antitoxin system RelE/ParE family toxin, at 4,481,413 to 4,481,745
_21165
Position (kb)
4480
4481 Strain fitness (log2 ratio)
-1
0
1 at 4480.467 kb on - strand at 4480.467 kb on - strand at 4480.575 kb on - strand at 4480.575 kb on - strand at 4480.597 kb on - strand at 4480.612 kb on - strand, within IAI46_21155 at 4480.679 kb on + strand, within IAI46_21155 at 4480.679 kb on + strand, within IAI46_21155 at 4480.694 kb on + strand, within IAI46_21155 at 4480.697 kb on + strand, within IAI46_21155 at 4480.697 kb on + strand, within IAI46_21155 at 4480.697 kb on + strand, within IAI46_21155 at 4480.698 kb on - strand, within IAI46_21155 at 4480.711 kb on + strand, within IAI46_21155 at 4480.724 kb on + strand, within IAI46_21155 at 4480.786 kb on + strand at 4480.791 kb on + strand at 4480.791 kb on + strand at 4480.791 kb on + strand at 4480.792 kb on - strand at 4480.829 kb on + strand at 4480.829 kb on + strand at 4480.829 kb on + strand at 4480.829 kb on + strand at 4480.830 kb on - strand at 4480.830 kb on - strand at 4480.830 kb on - strand at 4480.830 kb on - strand at 4480.830 kb on - strand at 4480.832 kb on - strand at 4480.832 kb on - strand at 4480.856 kb on + strand at 4480.857 kb on - strand at 4480.863 kb on + strand at 4480.906 kb on - strand at 4480.906 kb on - strand at 4480.906 kb on - strand at 4480.906 kb on - strand at 4480.908 kb on - strand at 4480.908 kb on - strand at 4480.908 kb on - strand at 4480.908 kb on - strand at 4480.908 kb on - strand at 4481.028 kb on + strand at 4481.028 kb on + strand at 4481.035 kb on + strand at 4481.041 kb on + strand at 4481.042 kb on - strand at 4481.072 kb on + strand at 4481.072 kb on + strand at 4481.073 kb on - strand at 4481.080 kb on + strand at 4481.080 kb on + strand at 4481.080 kb on + strand at 4481.080 kb on + strand at 4481.108 kb on + strand at 4481.128 kb on + strand at 4481.129 kb on - strand at 4481.129 kb on - strand at 4481.129 kb on - strand at 4481.129 kb on - strand at 4481.231 kb on + strand, within IAI46_21160 at 4481.231 kb on + strand, within IAI46_21160 at 4481.231 kb on + strand, within IAI46_21160 at 4481.232 kb on - strand, within IAI46_21160 at 4481.232 kb on - strand, within IAI46_21160 at 4481.256 kb on + strand, within IAI46_21160 at 4481.257 kb on - strand, within IAI46_21160 at 4481.285 kb on + strand, within IAI46_21160 at 4481.285 kb on + strand, within IAI46_21160 at 4481.286 kb on - strand, within IAI46_21160 at 4481.286 kb on - strand, within IAI46_21160 at 4481.286 kb on - strand, within IAI46_21160 at 4481.513 kb on + strand, within IAI46_21165 at 4481.513 kb on + strand, within IAI46_21165 at 4481.514 kb on - strand, within IAI46_21165 at 4481.514 kb on - strand, within IAI46_21165 at 4481.514 kb on - strand, within IAI46_21165 at 4481.514 kb on - strand, within IAI46_21165 at 4481.514 kb on - strand, within IAI46_21165 at 4481.668 kb on + strand, within IAI46_21165 at 4481.668 kb on + strand, within IAI46_21165 at 4481.686 kb on + strand, within IAI46_21165 at 4481.687 kb on - strand, within IAI46_21165 at 4481.689 kb on + strand, within IAI46_21165 at 4481.690 kb on - strand, within IAI46_21165 at 4481.690 kb on - strand, within IAI46_21165 at 4481.690 kb on - strand, within IAI46_21165 at 4481.690 kb on - strand, within IAI46_21165 at 4481.729 kb on - strand at 4481.729 kb on - strand at 4481.731 kb on + strand at 4481.731 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, anaerobic remove 4,480,467 - +0.3 4,480,467 - +0.1 4,480,575 - -0.1 4,480,575 - -0.2 4,480,597 - +0.2 4,480,612 - IAI46_21155 0.11 +0.8 4,480,679 + IAI46_21155 0.55 +0.9 4,480,679 + IAI46_21155 0.55 +0.3 4,480,694 + IAI46_21155 0.65 -0.9 4,480,697 + IAI46_21155 0.67 -0.2 4,480,697 + IAI46_21155 0.67 +1.0 4,480,697 + IAI46_21155 0.67 -0.4 4,480,698 - IAI46_21155 0.67 -0.1 4,480,711 + IAI46_21155 0.76 +0.1 4,480,724 + IAI46_21155 0.84 +0.1 4,480,786 + +0.1 4,480,791 + +0.2 4,480,791 + +0.1 4,480,791 + -0.1 4,480,792 - -0.5 4,480,829 + -0.1 4,480,829 + +0.6 4,480,829 + -0.0 4,480,829 + -0.2 4,480,830 - +0.3 4,480,830 - +0.2 4,480,830 - -0.3 4,480,830 - -0.6 4,480,830 - -0.2 4,480,832 - -0.4 4,480,832 - -0.1 4,480,856 + +0.4 4,480,857 - -0.3 4,480,863 + +0.1 4,480,906 - -0.9 4,480,906 - -0.1 4,480,906 - -0.9 4,480,906 - -0.7 4,480,908 - +0.1 4,480,908 - +1.0 4,480,908 - -0.3 4,480,908 - -1.0 4,480,908 - +0.3 4,481,028 + -1.0 4,481,028 + +1.2 4,481,035 + -0.3 4,481,041 + -1.7 4,481,042 - +0.4 4,481,072 + -0.3 4,481,072 + +1.0 4,481,073 - -0.1 4,481,080 + +0.8 4,481,080 + +0.3 4,481,080 + -0.2 4,481,080 + +0.7 4,481,108 + +0.2 4,481,128 + -0.2 4,481,129 - -0.8 4,481,129 - +0.1 4,481,129 - +1.0 4,481,129 - -0.6 4,481,231 + IAI46_21160 0.36 +0.5 4,481,231 + IAI46_21160 0.36 -0.3 4,481,231 + IAI46_21160 0.36 -0.6 4,481,232 - IAI46_21160 0.37 +0.2 4,481,232 - IAI46_21160 0.37 -0.2 4,481,256 + IAI46_21160 0.45 +0.6 4,481,257 - IAI46_21160 0.46 +0.5 4,481,285 + IAI46_21160 0.55 -1.3 4,481,285 + IAI46_21160 0.55 +0.1 4,481,286 - IAI46_21160 0.56 +0.0 4,481,286 - IAI46_21160 0.56 +0.6 4,481,286 - IAI46_21160 0.56 +0.8 4,481,513 + IAI46_21165 0.30 +1.3 4,481,513 + IAI46_21165 0.30 +0.5 4,481,514 - IAI46_21165 0.30 -0.1 4,481,514 - IAI46_21165 0.30 -0.2 4,481,514 - IAI46_21165 0.30 +0.4 4,481,514 - IAI46_21165 0.30 +0.1 4,481,514 - IAI46_21165 0.30 +0.3 4,481,668 + IAI46_21165 0.77 +0.4 4,481,668 + IAI46_21165 0.77 +0.8 4,481,686 + IAI46_21165 0.82 +0.5 4,481,687 - IAI46_21165 0.82 +1.4 4,481,689 + IAI46_21165 0.83 -0.1 4,481,690 - IAI46_21165 0.83 -1.6 4,481,690 - IAI46_21165 0.83 -0.9 4,481,690 - IAI46_21165 0.83 -0.1 4,481,690 - IAI46_21165 0.83 +1.1 4,481,729 - -0.4 4,481,729 - +0.3 4,481,731 + -1.0 4,481,731 + +0.3
Or see this region's nucleotide sequence