Strain Fitness in Serratia liquefaciens MT49 around IAI46_20145

Experiment: No stress control, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	No stress control, anaerobic
4,245,508	+		IAI46_20140	0.39	+0.6
4,245,508	+		IAI46_20140	0.39	+0.7
4,245,508	+		IAI46_20140	0.39	+0.3
4,245,508	+		IAI46_20140	0.39	-1.2
4,245,509	-		IAI46_20140	0.39	-0.0
4,245,509	-		IAI46_20140	0.39	+0.5
4,245,530	+		IAI46_20140	0.40	+0.2
4,245,587	+		IAI46_20140	0.44	+0.1
4,245,587	+		IAI46_20140	0.44	-0.1
4,245,635	+		IAI46_20140	0.48	-0.6
4,245,681	+		IAI46_20140	0.51	+0.7
4,245,682	-		IAI46_20140	0.51	-1.2
4,245,700	+		IAI46_20140	0.52	-0.1
4,245,701	-		IAI46_20140	0.52	-0.9
4,245,705	-		IAI46_20140	0.52	+0.2
4,245,816	-		IAI46_20140	0.60	+0.2
4,245,816	-		IAI46_20140	0.60	+0.5
4,245,967	+		IAI46_20140	0.70	-0.7
4,245,968	-		IAI46_20140	0.71	-0.5
4,246,012	+		IAI46_20140	0.74	+0.1
4,246,012	+		IAI46_20140	0.74	+0.3
4,246,014	+		IAI46_20140	0.74	+0.6
4,246,014	+		IAI46_20140	0.74	+0.1
4,246,015	-		IAI46_20140	0.74	-0.6
4,246,015	-		IAI46_20140	0.74	+0.4
4,246,038	-		IAI46_20140	0.75	+0.0
4,246,087	+		IAI46_20140	0.79	+1.2
4,246,088	-		IAI46_20140	0.79	-0.2
4,246,223	-		IAI46_20140	0.88	-0.2
4,246,237	+		IAI46_20140	0.89	+0.8
4,246,244	+		IAI46_20140	0.90	-0.0
4,246,247	-		IAI46_20140	0.90	-0.2
4,246,289	+				+1.2
4,246,289	+				-0.6
4,246,290	-				-0.7
4,246,290	-				+0.2
4,246,290	-				+0.6
4,246,295	-				-0.1
4,246,301	+				-0.4
4,246,301	+				-0.2
4,246,302	-				-0.7
4,246,302	-				-1.1
4,246,302	-				+0.1
4,246,305	+				+1.0
4,246,305	+				-0.2
4,246,306	-				-0.0
4,246,306	-				-1.5
4,246,322	-				+2.8
4,246,347	+				-0.4
4,246,353	+				+0.9
4,246,353	+				-0.4
4,246,360	+				-1.0
4,246,360	+				-1.1
4,246,361	-				+0.5
4,246,361	-				-1.2
4,246,361	-				+0.5
4,246,363	+				-0.6
4,246,363	+				-0.5
4,246,364	-				+0.4
4,246,364	-				+0.1
4,246,459	+				+2.4
4,246,459	+				+0.1
4,246,489	+				+0.7
4,246,511	-				-0.4
4,246,524	-				-0.3
4,246,646	-				-0.4
4,246,693	+		IAI46_20145	0.11	+0.0
4,246,781	-		IAI46_20145	0.15	+1.0
4,246,880	-		IAI46_20145	0.20	-1.8
4,246,880	-		IAI46_20145	0.20	-0.2
4,247,007	-		IAI46_20145	0.26	-1.3
4,247,007	-		IAI46_20145	0.26	-0.7
4,247,007	-		IAI46_20145	0.26	+0.0
4,247,009	-		IAI46_20145	0.26	+0.5
4,247,009	-		IAI46_20145	0.26	-0.9
4,247,009	-		IAI46_20145	0.26	-1.6
4,247,033	+		IAI46_20145	0.27	-0.5
4,247,034	-		IAI46_20145	0.27	+0.2
4,247,050	+		IAI46_20145	0.28	-0.1
4,247,054	+		IAI46_20145	0.28	+1.6
4,247,054	+		IAI46_20145	0.28	+0.4
4,247,055	-		IAI46_20145	0.28	+0.1
4,247,076	-		IAI46_20145	0.29	+0.5
4,247,102	+		IAI46_20145	0.30	+0.8
4,247,146	+		IAI46_20145	0.32	+0.2
4,247,146	+		IAI46_20145	0.32	+0.6
4,247,147	-		IAI46_20145	0.32	+0.6
4,247,147	-		IAI46_20145	0.32	+0.5
4,247,147	-		IAI46_20145	0.32	-0.5
4,247,147	-		IAI46_20145	0.32	+0.1
4,247,150	+		IAI46_20145	0.32	+1.3
4,247,150	+		IAI46_20145	0.32	+0.3
4,247,150	+		IAI46_20145	0.32	+0.1
4,247,150	+		IAI46_20145	0.32	+1.1
4,247,150	+		IAI46_20145	0.32	-0.2
4,247,151	-		IAI46_20145	0.32	+0.0
4,247,151	-		IAI46_20145	0.32	-0.1
4,247,151	-		IAI46_20145	0.32	+1.7
4,247,151	-		IAI46_20145	0.32	+0.1
4,247,151	-		IAI46_20145	0.32	+0.5
4,247,304	-		IAI46_20145	0.39	-0.3
4,247,393	-		IAI46_20145	0.44	-0.1
4,247,393	-		IAI46_20145	0.44	-0.4
4,247,422	+		IAI46_20145	0.45	-0.9
4,247,423	-		IAI46_20145	0.45	+0.0
4,247,423	-		IAI46_20145	0.45	-0.1
4,247,423	-		IAI46_20145	0.45	-0.0
4,247,459	+		IAI46_20145	0.47	+0.4
4,247,459	+		IAI46_20145	0.47	-0.3
4,247,460	-		IAI46_20145	0.47	-1.2
4,247,521	+		IAI46_20145	0.50	-0.4
4,247,572	+		IAI46_20145	0.52	-0.2
4,247,573	-		IAI46_20145	0.52	+0.7
4,247,593	+		IAI46_20145	0.53	-0.1
4,247,593	+		IAI46_20145	0.53	-0.1
4,247,594	-		IAI46_20145	0.53	+1.1
4,247,594	-		IAI46_20145	0.53	-0.0
4,247,645	+		IAI46_20145	0.55	-0.1
4,247,645	+		IAI46_20145	0.55	+0.7
4,247,645	+		IAI46_20145	0.55	-0.2
4,247,646	-		IAI46_20145	0.55	-0.3
4,247,646	-		IAI46_20145	0.55	+0.2
4,247,648	+		IAI46_20145	0.56	+0.9
4,247,648	+		IAI46_20145	0.56	-0.0
4,247,649	-		IAI46_20145	0.56	+1.2
4,247,649	-		IAI46_20145	0.56	-1.1
4,247,662	+		IAI46_20145	0.56	-0.4
4,247,663	-		IAI46_20145	0.56	-0.6
4,247,663	-		IAI46_20145	0.56	+0.7
4,247,663	-		IAI46_20145	0.56	-0.2
4,247,677	+		IAI46_20145	0.57	-0.3
4,247,677	+		IAI46_20145	0.57	-0.2
4,247,677	+		IAI46_20145	0.57	-0.9
4,247,677	+		IAI46_20145	0.57	-0.4
4,247,677	+		IAI46_20145	0.57	-0.1
4,247,678	-		IAI46_20145	0.57	+0.1
4,247,681	+		IAI46_20145	0.57	-1.0
4,247,681	+		IAI46_20145	0.57	-0.0
4,247,682	-		IAI46_20145	0.57	-0.4
4,247,732	+		IAI46_20145	0.59	+0.1
4,247,802	-		IAI46_20145	0.63	+0.9
4,247,828	+		IAI46_20145	0.64	-0.3
4,247,874	-		IAI46_20145	0.66	-0.6
4,247,874	-		IAI46_20145	0.66	-1.3
4,247,874	-		IAI46_20145	0.66	-0.0
4,247,911	+		IAI46_20145	0.68	-1.0
4,247,912	-		IAI46_20145	0.68	-0.4
4,247,912	-		IAI46_20145	0.68	-1.8
4,247,936	+		IAI46_20145	0.69	+0.5
4,247,958	-		IAI46_20145	0.70	+0.3
4,247,958	-		IAI46_20145	0.70	+1.4
4,247,958	-		IAI46_20145	0.70	+0.1
4,247,958	-		IAI46_20145	0.70	+0.5
4,247,958	-		IAI46_20145	0.70	-0.5
4,247,959	+		IAI46_20145	0.70	+1.9
4,247,959	+		IAI46_20145	0.70	-0.2
4,247,959	+		IAI46_20145	0.70	+0.8
4,247,959	+		IAI46_20145	0.70	+0.3
4,247,960	-		IAI46_20145	0.70	-1.5
4,247,960	-		IAI46_20145	0.70	-1.0
4,247,960	-		IAI46_20145	0.70	+0.4
4,247,990	+		IAI46_20145	0.72	-1.3
4,247,991	-		IAI46_20145	0.72	+0.3
4,247,991	-		IAI46_20145	0.72	-0.7
4,247,991	-		IAI46_20145	0.72	+1.0
4,247,991	-		IAI46_20145	0.72	+0.5
4,247,991	-		IAI46_20145	0.72	+0.5
4,247,992	+		IAI46_20145	0.72	+0.1
4,247,992	+		IAI46_20145	0.72	+0.7
4,247,993	-		IAI46_20145	0.72	+0.6
4,247,993	-		IAI46_20145	0.72	+1.8
4,247,993	-		IAI46_20145	0.72	+0.3
4,247,993	-		IAI46_20145	0.72	+0.4
4,248,056	+		IAI46_20145	0.75	-0.9
4,248,057	-		IAI46_20145	0.75	+0.8
4,248,156	-		IAI46_20145	0.79	+0.2
4,248,156	-		IAI46_20145	0.79	-0.9
4,248,185	-		IAI46_20145	0.81	+0.0
4,248,185	-		IAI46_20145	0.81	+0.3
4,248,222	-		IAI46_20145	0.82	+1.1
4,248,230	-		IAI46_20145	0.83	-1.3
4,248,230	-		IAI46_20145	0.83	+0.7
4,248,270	-		IAI46_20145	0.85	+0.5
4,248,361	+		IAI46_20145	0.89	+0.8
4,248,361	+		IAI46_20145	0.89	-0.2
4,248,361	+		IAI46_20145	0.89	+1.3
4,248,362	-		IAI46_20145	0.89	+0.3
4,248,372	-		IAI46_20145	0.89	-0.1
4,248,372	-		IAI46_20145	0.89	-0.5
4,248,373	+		IAI46_20145	0.89	+0.2
4,248,373	+		IAI46_20145	0.89	+0.0
4,248,373	+		IAI46_20145	0.89	+0.6
4,248,373	+		IAI46_20145	0.89	+1.2
4,248,374	-		IAI46_20145	0.89	-0.5
4,248,374	-		IAI46_20145	0.89	+0.6
4,248,374	-		IAI46_20145	0.89	-0.2
4,248,374	-		IAI46_20145	0.89	+0.0
4,248,374	-		IAI46_20145	0.89	-0.9
4,248,415	+				+0.4
4,248,416	-				-0.0
4,248,416	-				+0.6
4,248,455	+				-0.8
4,248,455	+				+0.7
4,248,456	-				+1.0
4,248,472	-				+0.4
4,248,492	-				-0.5
4,248,496	+				+1.0
4,248,545	+				-1.5
4,248,562	+				-1.5
4,248,563	-				-0.5
4,248,584	+				+1.3
4,248,584	+				+0.4
4,248,584	+				+0.1
4,248,585	-				-0.3
4,248,585	-				+1.0
4,248,588	+				-0.6
4,248,588	+				+0.1
4,248,588	+				+0.2
4,248,588	+				+0.1
4,248,588	+				+0.8
4,248,588	+				-0.5
4,248,589	-				-1.0
4,248,589	-				+1.5
4,248,589	-				+0.2
4,248,589	-				+1.1
4,248,590	+				+0.0
4,248,591	-				-0.3
4,248,600	-				-0.1
4,248,600	-				+1.1
4,248,615	+				+0.7
4,248,648	+				+0.8
4,248,666	+				-0.2
4,248,681	+				-0.9
4,248,682	-				+0.8
4,248,690	-				+1.1
4,248,690	-				-0.3
4,248,724	+				+0.5
4,248,724	+				+0.8
4,248,770	+				+0.3
4,248,805	-				-1.0
4,248,925	+		IAI46_20150	0.18	+0.8
4,248,925	+		IAI46_20150	0.18	-0.1
4,248,926	-		IAI46_20150	0.18	-1.0
4,248,941	+		IAI46_20150	0.19	-1.1
4,248,942	-		IAI46_20150	0.19	-0.0
4,249,144	+		IAI46_20150	0.34	+0.5
4,249,145	-		IAI46_20150	0.34	+0.5
4,249,145	-		IAI46_20150	0.34	+0.7
4,249,248	+		IAI46_20150	0.41	-0.1
4,249,248	+		IAI46_20150	0.41	-1.6
4,249,261	-		IAI46_20150	0.42	-0.5
4,249,301	+		IAI46_20150	0.45	+0.3
4,249,302	-		IAI46_20150	0.45	-0.4
4,249,302	-		IAI46_20150	0.45	-1.0
4,249,302	-		IAI46_20150	0.45	-0.1
4,249,306	-		IAI46_20150	0.46	+0.1
4,249,306	-		IAI46_20150	0.46	+0.4
4,249,334	+		IAI46_20150	0.48	+2.0
4,249,335	-		IAI46_20150	0.48	+0.1
4,249,335	-		IAI46_20150	0.48	-0.3
4,249,384	-		IAI46_20150	0.52	+0.6
4,249,414	+		IAI46_20150	0.54	-0.1
4,249,415	-		IAI46_20150	0.54	+0.9
4,249,415	-		IAI46_20150	0.54	+0.5
4,249,462	-		IAI46_20150	0.57	+0.6
4,249,501	-		IAI46_20150	0.60	+0.5
4,249,510	-		IAI46_20150	0.61	-0.7
4,249,510	-		IAI46_20150	0.61	+0.3
4,249,518	-		IAI46_20150	0.61	+0.0
4,249,518	-		IAI46_20150	0.61	+0.1
4,249,518	-		IAI46_20150	0.61	+0.3
4,249,518	-		IAI46_20150	0.61	+1.5
4,249,582	+		IAI46_20150	0.66	+0.1
4,249,593	+		IAI46_20150	0.67	+0.4
4,249,593	+		IAI46_20150	0.67	-1.3
4,249,594	-		IAI46_20150	0.67	+0.7
4,249,594	-		IAI46_20150	0.67	-0.9