Experiment: No stress control, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_17750 and IAI46_17755 are separated by 74 nucleotides IAI46_17755 and IAI46_17760 are separated by 66 nucleotides IAI46_17760 and IAI46_17765 are separated by 90 nucleotides
IAI46_17750: IAI46_17750 - acetate kinase, at 3,741,852 to 3,743,054
_17750
IAI46_17755: IAI46_17755 - phosphate acetyltransferase, at 3,743,129 to 3,745,291
_17755
IAI46_17760: IAI46_17760 - NUDIX hydrolase YfcD, at 3,745,358 to 3,745,915
_17760
IAI46_17765: IAI46_17765 - phosphodiesterase, at 3,746,006 to 3,746,557
_17765
Position (kb)
3743
3744
3745
3746 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3742.163 kb on - strand, within IAI46_17750 at 3742.335 kb on + strand, within IAI46_17750 at 3742.341 kb on + strand, within IAI46_17750 at 3742.354 kb on - strand, within IAI46_17750 at 3742.539 kb on - strand, within IAI46_17750 at 3742.728 kb on + strand, within IAI46_17750 at 3742.729 kb on - strand, within IAI46_17750 at 3742.757 kb on + strand, within IAI46_17750 at 3742.766 kb on - strand, within IAI46_17750 at 3742.790 kb on + strand, within IAI46_17750 at 3743.095 kb on + strand at 3743.106 kb on + strand at 3743.123 kb on + strand at 3743.124 kb on - strand at 3743.143 kb on + strand at 3743.144 kb on - strand at 3743.349 kb on - strand, within IAI46_17755 at 3743.898 kb on + strand, within IAI46_17755 at 3744.308 kb on + strand, within IAI46_17755 at 3744.308 kb on + strand, within IAI46_17755 at 3744.531 kb on - strand, within IAI46_17755 at 3744.531 kb on - strand, within IAI46_17755 at 3744.557 kb on - strand, within IAI46_17755 at 3744.780 kb on + strand, within IAI46_17755 at 3744.782 kb on + strand, within IAI46_17755 at 3744.899 kb on + strand, within IAI46_17755 at 3745.118 kb on + strand at 3745.229 kb on + strand at 3745.229 kb on + strand at 3745.230 kb on - strand at 3745.230 kb on - strand at 3745.231 kb on + strand at 3745.293 kb on - strand at 3745.304 kb on + strand at 3745.305 kb on - strand at 3745.396 kb on - strand at 3745.396 kb on - strand at 3745.789 kb on + strand, within IAI46_17760 at 3745.791 kb on + strand, within IAI46_17760 at 3745.791 kb on + strand, within IAI46_17760 at 3745.791 kb on + strand, within IAI46_17760 at 3745.792 kb on - strand, within IAI46_17760 at 3745.792 kb on - strand, within IAI46_17760 at 3745.792 kb on - strand, within IAI46_17760 at 3745.792 kb on - strand, within IAI46_17760 at 3745.792 kb on - strand, within IAI46_17760 at 3745.792 kb on - strand, within IAI46_17760 at 3745.795 kb on + strand, within IAI46_17760 at 3745.795 kb on + strand, within IAI46_17760 at 3745.796 kb on - strand, within IAI46_17760 at 3745.796 kb on - strand, within IAI46_17760 at 3745.888 kb on + strand at 3745.931 kb on - strand at 3746.000 kb on + strand at 3746.001 kb on - strand at 3746.001 kb on - strand at 3746.003 kb on - strand at 3746.016 kb on - strand at 3746.064 kb on - strand, within IAI46_17765 at 3746.064 kb on - strand, within IAI46_17765 at 3746.082 kb on - strand, within IAI46_17765 at 3746.172 kb on - strand, within IAI46_17765 at 3746.188 kb on - strand, within IAI46_17765 at 3746.236 kb on - strand, within IAI46_17765 at 3746.276 kb on + strand, within IAI46_17765 at 3746.276 kb on + strand, within IAI46_17765
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, anaerobic remove 3,742,163 - IAI46_17750 0.26 -0.6 3,742,335 + IAI46_17750 0.40 +0.1 3,742,341 + IAI46_17750 0.41 -0.6 3,742,354 - IAI46_17750 0.42 +0.6 3,742,539 - IAI46_17750 0.57 +1.5 3,742,728 + IAI46_17750 0.73 -1.3 3,742,729 - IAI46_17750 0.73 +0.4 3,742,757 + IAI46_17750 0.75 -1.6 3,742,766 - IAI46_17750 0.76 -0.6 3,742,790 + IAI46_17750 0.78 +0.4 3,743,095 + +0.3 3,743,106 + +0.6 3,743,123 + -1.6 3,743,124 - -0.3 3,743,143 + -0.6 3,743,144 - -0.8 3,743,349 - IAI46_17755 0.10 -0.0 3,743,898 + IAI46_17755 0.36 -0.8 3,744,308 + IAI46_17755 0.55 -0.5 3,744,308 + IAI46_17755 0.55 -0.0 3,744,531 - IAI46_17755 0.65 +0.8 3,744,531 - IAI46_17755 0.65 +0.4 3,744,557 - IAI46_17755 0.66 -0.9 3,744,780 + IAI46_17755 0.76 -1.0 3,744,782 + IAI46_17755 0.76 -0.3 3,744,899 + IAI46_17755 0.82 -1.3 3,745,118 + -1.5 3,745,229 + -0.7 3,745,229 + -2.8 3,745,230 - -1.6 3,745,230 - +0.1 3,745,231 + +1.0 3,745,293 - -0.4 3,745,304 + -0.4 3,745,305 - +0.6 3,745,396 - -0.6 3,745,396 - -1.1 3,745,789 + IAI46_17760 0.77 -0.0 3,745,791 + IAI46_17760 0.78 +0.5 3,745,791 + IAI46_17760 0.78 -1.5 3,745,791 + IAI46_17760 0.78 +0.5 3,745,792 - IAI46_17760 0.78 -0.7 3,745,792 - IAI46_17760 0.78 -0.3 3,745,792 - IAI46_17760 0.78 -0.1 3,745,792 - IAI46_17760 0.78 +1.7 3,745,792 - IAI46_17760 0.78 +0.4 3,745,792 - IAI46_17760 0.78 +0.2 3,745,795 + IAI46_17760 0.78 +0.5 3,745,795 + IAI46_17760 0.78 -0.5 3,745,796 - IAI46_17760 0.78 +0.1 3,745,796 - IAI46_17760 0.78 +0.3 3,745,888 + -0.3 3,745,931 - -1.2 3,746,000 + -0.6 3,746,001 - -0.4 3,746,001 - -0.2 3,746,003 - +0.8 3,746,016 - -0.8 3,746,064 - IAI46_17765 0.11 +1.0 3,746,064 - IAI46_17765 0.11 +0.4 3,746,082 - IAI46_17765 0.14 -0.6 3,746,172 - IAI46_17765 0.30 +1.6 3,746,188 - IAI46_17765 0.33 +1.4 3,746,236 - IAI46_17765 0.42 +0.3 3,746,276 + IAI46_17765 0.49 -1.3 3,746,276 + IAI46_17765 0.49 +0.4
Or see this region's nucleotide sequence