Experiment: No stress control, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_17660 and IAI46_17665 overlap by 4 nucleotides IAI46_17665 and IAI46_17670 overlap by 4 nucleotides IAI46_17670 and IAI46_17675 are separated by 13 nucleotides
IAI46_17660: IAI46_17660 - NADH-quinone oxidoreductase subunit L, at 3,721,338 to 3,723,185
_17660
IAI46_17665: IAI46_17665 - NADH-quinone oxidoreductase subunit NuoK, at 3,723,182 to 3,723,484
_17665
IAI46_17670: IAI46_17670 - NADH-quinone oxidoreductase subunit J, at 3,723,481 to 3,724,041
_17670
IAI46_17675: IAI46_17675 - NADH-quinone oxidoreductase subunit NuoI, at 3,724,055 to 3,724,597
_17675
Position (kb)
3723
3724 Strain fitness (log2 ratio)
-1
0
1 at 3722.224 kb on + strand, within IAI46_17660 at 3722.249 kb on - strand, within IAI46_17660 at 3722.611 kb on + strand, within IAI46_17660 at 3722.708 kb on - strand, within IAI46_17660 at 3722.791 kb on - strand, within IAI46_17660 at 3722.839 kb on + strand, within IAI46_17660 at 3723.165 kb on - strand at 3723.169 kb on - strand at 3723.169 kb on - strand at 3723.172 kb on + strand at 3723.206 kb on - strand at 3723.206 kb on - strand at 3723.212 kb on - strand at 3723.234 kb on + strand, within IAI46_17665 at 3723.300 kb on + strand, within IAI46_17665 at 3723.300 kb on + strand, within IAI46_17665 at 3723.395 kb on - strand, within IAI46_17665 at 3723.632 kb on + strand, within IAI46_17670 at 3723.633 kb on - strand, within IAI46_17670 at 3723.633 kb on - strand, within IAI46_17670 at 3723.867 kb on - strand, within IAI46_17670 at 3723.950 kb on + strand, within IAI46_17670 at 3723.976 kb on - strand, within IAI46_17670 at 3724.025 kb on + strand at 3724.154 kb on - strand, within IAI46_17675 at 3724.264 kb on + strand, within IAI46_17675 at 3724.264 kb on + strand, within IAI46_17675 at 3724.415 kb on + strand, within IAI46_17675 at 3724.415 kb on + strand, within IAI46_17675
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, anaerobic remove 3,722,224 + IAI46_17660 0.48 -1.0 3,722,249 - IAI46_17660 0.49 +0.2 3,722,611 + IAI46_17660 0.69 -0.2 3,722,708 - IAI46_17660 0.74 -0.3 3,722,791 - IAI46_17660 0.79 +1.1 3,722,839 + IAI46_17660 0.81 -0.6 3,723,165 - -0.2 3,723,169 - +1.5 3,723,169 - -0.8 3,723,172 + +1.7 3,723,206 - +1.6 3,723,206 - -0.3 3,723,212 - +0.4 3,723,234 + IAI46_17665 0.17 +1.0 3,723,300 + IAI46_17665 0.39 -0.0 3,723,300 + IAI46_17665 0.39 -0.3 3,723,395 - IAI46_17665 0.70 -0.3 3,723,632 + IAI46_17670 0.27 -0.2 3,723,633 - IAI46_17670 0.27 +0.5 3,723,633 - IAI46_17670 0.27 -0.2 3,723,867 - IAI46_17670 0.69 +1.2 3,723,950 + IAI46_17670 0.84 +1.7 3,723,976 - IAI46_17670 0.88 -0.0 3,724,025 + -1.3 3,724,154 - IAI46_17675 0.18 -1.0 3,724,264 + IAI46_17675 0.38 -0.1 3,724,264 + IAI46_17675 0.38 -0.1 3,724,415 + IAI46_17675 0.66 +1.7 3,724,415 + IAI46_17675 0.66 -0.2
Or see this region's nucleotide sequence