Experiment: No stress control, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_16720 and IAI46_16725 are separated by 835 nucleotides IAI46_16725 and IAI46_16730 are separated by 49 nucleotides
IAI46_16720: IAI46_16720 - AMP nucleosidase, at 3,503,327 to 3,504,787
_16720
IAI46_16725: IAI46_16725 - hypothetical protein, at 3,505,623 to 3,506,540
_16725
IAI46_16730: IAI46_16730 - efflux transporter outer membrane subunit, at 3,506,590 to 3,507,993
_16730
Position (kb)
3505
3506
3507 Strain fitness (log2 ratio)
-1
0
1 at 3504.665 kb on + strand at 3504.665 kb on + strand at 3504.761 kb on - strand at 3504.830 kb on + strand at 3504.831 kb on - strand at 3504.831 kb on - strand at 3504.879 kb on - strand at 3504.897 kb on + strand at 3504.898 kb on - strand at 3505.119 kb on + strand at 3505.119 kb on + strand at 3505.505 kb on + strand at 3505.584 kb on + strand at 3505.585 kb on - strand at 3505.622 kb on + strand at 3505.622 kb on + strand at 3505.622 kb on + strand at 3505.622 kb on + strand at 3505.622 kb on + strand at 3505.623 kb on - strand at 3505.623 kb on - strand at 3505.623 kb on - strand at 3505.712 kb on + strand at 3505.713 kb on - strand at 3505.756 kb on - strand, within IAI46_16725 at 3505.848 kb on + strand, within IAI46_16725 at 3505.849 kb on - strand, within IAI46_16725 at 3505.990 kb on - strand, within IAI46_16725 at 3506.071 kb on + strand, within IAI46_16725 at 3506.253 kb on + strand, within IAI46_16725 at 3506.253 kb on + strand, within IAI46_16725 at 3506.280 kb on + strand, within IAI46_16725 at 3506.281 kb on - strand, within IAI46_16725 at 3506.328 kb on + strand, within IAI46_16725 at 3506.328 kb on + strand, within IAI46_16725 at 3506.329 kb on - strand, within IAI46_16725 at 3506.329 kb on - strand, within IAI46_16725 at 3506.361 kb on + strand, within IAI46_16725 at 3506.362 kb on - strand, within IAI46_16725 at 3506.538 kb on + strand at 3506.684 kb on + strand at 3506.718 kb on - strand at 3506.718 kb on - strand at 3506.718 kb on - strand at 3506.863 kb on + strand, within IAI46_16730 at 3506.863 kb on + strand, within IAI46_16730 at 3506.864 kb on - strand, within IAI46_16730 at 3506.950 kb on - strand, within IAI46_16730 at 3506.950 kb on - strand, within IAI46_16730 at 3506.950 kb on - strand, within IAI46_16730 at 3507.103 kb on + strand, within IAI46_16730 at 3507.296 kb on + strand, within IAI46_16730 at 3507.471 kb on - strand, within IAI46_16730
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, anaerobic remove 3,504,665 + +1.0 3,504,665 + +0.3 3,504,761 - +0.8 3,504,830 + +0.5 3,504,831 - +0.9 3,504,831 - +0.5 3,504,879 - -0.0 3,504,897 + -0.9 3,504,898 - +0.6 3,505,119 + +0.2 3,505,119 + +1.0 3,505,505 + +1.6 3,505,584 + -0.1 3,505,585 - -0.6 3,505,622 + -0.1 3,505,622 + -0.3 3,505,622 + +0.9 3,505,622 + +0.2 3,505,622 + -0.7 3,505,623 - +0.4 3,505,623 - -0.4 3,505,623 - -1.0 3,505,712 + +0.7 3,505,713 - +0.3 3,505,756 - IAI46_16725 0.14 -0.2 3,505,848 + IAI46_16725 0.25 -0.4 3,505,849 - IAI46_16725 0.25 -1.4 3,505,990 - IAI46_16725 0.40 -0.6 3,506,071 + IAI46_16725 0.49 +0.7 3,506,253 + IAI46_16725 0.69 +0.2 3,506,253 + IAI46_16725 0.69 +0.9 3,506,280 + IAI46_16725 0.72 -0.4 3,506,281 - IAI46_16725 0.72 +0.1 3,506,328 + IAI46_16725 0.77 +1.0 3,506,328 + IAI46_16725 0.77 +0.9 3,506,329 - IAI46_16725 0.77 -0.7 3,506,329 - IAI46_16725 0.77 -0.4 3,506,361 + IAI46_16725 0.80 +0.3 3,506,362 - IAI46_16725 0.81 +1.1 3,506,538 + +1.2 3,506,684 + -0.1 3,506,718 - -0.6 3,506,718 - -0.1 3,506,718 - -0.8 3,506,863 + IAI46_16730 0.19 +0.6 3,506,863 + IAI46_16730 0.19 +0.1 3,506,864 - IAI46_16730 0.20 -0.1 3,506,950 - IAI46_16730 0.26 +0.9 3,506,950 - IAI46_16730 0.26 +1.3 3,506,950 - IAI46_16730 0.26 -0.3 3,507,103 + IAI46_16730 0.37 +0.5 3,507,296 + IAI46_16730 0.50 -0.7 3,507,471 - IAI46_16730 0.63 +0.2
Or see this region's nucleotide sequence