Experiment: No stress control, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_15605 and IAI46_15610 are separated by 11 nucleotides IAI46_15610 and IAI46_15615 overlap by 4 nucleotides
IAI46_15605: IAI46_15605 - nitrate/nitrite two-component system sensor histidine kinase NarX, at 3,272,988 to 3,274,772
_15605
IAI46_15610: IAI46_15610 - two-component system response regulator NarL, at 3,274,784 to 3,275,434
_15610
IAI46_15615: IAI46_15615 - YchO/YchP family invasin, at 3,275,431 to 3,276,936
_15615
Position (kb)
3274
3275
3276 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3274.070 kb on + strand, within IAI46_15605 at 3274.071 kb on - strand, within IAI46_15605 at 3274.071 kb on - strand, within IAI46_15605 at 3274.310 kb on + strand, within IAI46_15605 at 3274.310 kb on + strand, within IAI46_15605 at 3274.310 kb on + strand, within IAI46_15605 at 3274.310 kb on + strand, within IAI46_15605 at 3274.628 kb on + strand at 3274.628 kb on + strand at 3274.771 kb on - strand at 3274.812 kb on + strand at 3274.849 kb on - strand, within IAI46_15610 at 3274.967 kb on - strand, within IAI46_15610 at 3275.080 kb on - strand, within IAI46_15610 at 3275.106 kb on + strand, within IAI46_15610 at 3275.107 kb on - strand, within IAI46_15610 at 3275.412 kb on + strand at 3275.877 kb on + strand, within IAI46_15615 at 3275.921 kb on + strand, within IAI46_15615 at 3275.921 kb on + strand, within IAI46_15615 at 3275.922 kb on - strand, within IAI46_15615 at 3275.932 kb on + strand, within IAI46_15615 at 3276.053 kb on + strand, within IAI46_15615 at 3276.053 kb on + strand, within IAI46_15615 at 3276.054 kb on - strand, within IAI46_15615 at 3276.132 kb on - strand, within IAI46_15615 at 3276.266 kb on + strand, within IAI46_15615 at 3276.272 kb on + strand, within IAI46_15615 at 3276.272 kb on + strand, within IAI46_15615 at 3276.272 kb on + strand, within IAI46_15615 at 3276.273 kb on - strand, within IAI46_15615 at 3276.273 kb on - strand, within IAI46_15615 at 3276.273 kb on - strand, within IAI46_15615 at 3276.366 kb on + strand, within IAI46_15615 at 3276.367 kb on - strand, within IAI46_15615
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, anaerobic remove 3,274,070 + IAI46_15605 0.61 +0.4 3,274,071 - IAI46_15605 0.61 +1.0 3,274,071 - IAI46_15605 0.61 +1.4 3,274,310 + IAI46_15605 0.74 -2.1 3,274,310 + IAI46_15605 0.74 +0.0 3,274,310 + IAI46_15605 0.74 -0.6 3,274,310 + IAI46_15605 0.74 -0.6 3,274,628 + +0.4 3,274,628 + -0.0 3,274,771 - +0.8 3,274,812 + -1.8 3,274,849 - IAI46_15610 0.10 -1.9 3,274,967 - IAI46_15610 0.28 -0.6 3,275,080 - IAI46_15610 0.45 -0.5 3,275,106 + IAI46_15610 0.49 +0.4 3,275,107 - IAI46_15610 0.50 -0.1 3,275,412 + -0.1 3,275,877 + IAI46_15615 0.30 -0.5 3,275,921 + IAI46_15615 0.33 -0.8 3,275,921 + IAI46_15615 0.33 -0.8 3,275,922 - IAI46_15615 0.33 +0.8 3,275,932 + IAI46_15615 0.33 -1.5 3,276,053 + IAI46_15615 0.41 -0.8 3,276,053 + IAI46_15615 0.41 +2.1 3,276,054 - IAI46_15615 0.41 -0.3 3,276,132 - IAI46_15615 0.47 +1.0 3,276,266 + IAI46_15615 0.55 -2.2 3,276,272 + IAI46_15615 0.56 +0.0 3,276,272 + IAI46_15615 0.56 -0.4 3,276,272 + IAI46_15615 0.56 -0.8 3,276,273 - IAI46_15615 0.56 +0.4 3,276,273 - IAI46_15615 0.56 +0.7 3,276,273 - IAI46_15615 0.56 -0.1 3,276,366 + IAI46_15615 0.62 -0.1 3,276,367 - IAI46_15615 0.62 +0.2
Or see this region's nucleotide sequence