Experiment: No stress control, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_15315 and IAI46_15320 are separated by 11 nucleotides IAI46_15320 and IAI46_15325 are separated by 180 nucleotides
IAI46_15315: IAI46_15315 - succinylglutamate desuccinylase, at 3,204,276 to 3,205,259
_15315
IAI46_15320: IAI46_15320 - N-succinylarginine dihydrolase, at 3,205,271 to 3,206,611
_15320
IAI46_15325: IAI46_15325 - succinylglutamate-semialdehyde dehydrogenase, at 3,206,792 to 3,208,264
_15325
Position (kb)
3205
3206
3207 Strain fitness (log2 ratio)
-1
0
1 at 3204.277 kb on + strand at 3204.642 kb on - strand, within IAI46_15315 at 3204.760 kb on + strand, within IAI46_15315 at 3204.761 kb on - strand, within IAI46_15315 at 3204.833 kb on - strand, within IAI46_15315 at 3205.272 kb on + strand at 3205.392 kb on + strand at 3205.396 kb on - strand at 3205.494 kb on - strand, within IAI46_15320 at 3205.596 kb on + strand, within IAI46_15320 at 3205.690 kb on - strand, within IAI46_15320 at 3205.806 kb on + strand, within IAI46_15320 at 3205.832 kb on + strand, within IAI46_15320 at 3205.833 kb on - strand, within IAI46_15320 at 3205.915 kb on + strand, within IAI46_15320 at 3205.915 kb on + strand, within IAI46_15320 at 3205.915 kb on + strand, within IAI46_15320 at 3205.916 kb on - strand, within IAI46_15320 at 3205.916 kb on - strand, within IAI46_15320 at 3206.056 kb on - strand, within IAI46_15320 at 3206.559 kb on + strand at 3206.559 kb on + strand at 3206.560 kb on - strand at 3206.654 kb on + strand at 3206.654 kb on + strand at 3206.660 kb on - strand at 3206.706 kb on + strand at 3206.707 kb on - strand at 3206.707 kb on - strand at 3206.707 kb on - strand at 3206.720 kb on + strand at 3206.720 kb on + strand at 3206.721 kb on - strand at 3206.753 kb on + strand at 3206.890 kb on - strand at 3207.054 kb on + strand, within IAI46_15325 at 3207.130 kb on - strand, within IAI46_15325
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, anaerobic remove 3,204,277 + -0.6 3,204,642 - IAI46_15315 0.37 +0.0 3,204,760 + IAI46_15315 0.49 -0.4 3,204,761 - IAI46_15315 0.49 -0.9 3,204,833 - IAI46_15315 0.57 +0.9 3,205,272 + +1.2 3,205,392 + +1.7 3,205,396 - -0.3 3,205,494 - IAI46_15320 0.17 -0.5 3,205,596 + IAI46_15320 0.24 -0.3 3,205,690 - IAI46_15320 0.31 +0.7 3,205,806 + IAI46_15320 0.40 +0.5 3,205,832 + IAI46_15320 0.42 +0.9 3,205,833 - IAI46_15320 0.42 -0.1 3,205,915 + IAI46_15320 0.48 +0.7 3,205,915 + IAI46_15320 0.48 -0.5 3,205,915 + IAI46_15320 0.48 +0.3 3,205,916 - IAI46_15320 0.48 +0.7 3,205,916 - IAI46_15320 0.48 +0.5 3,206,056 - IAI46_15320 0.59 +0.1 3,206,559 + +0.7 3,206,559 + -0.9 3,206,560 - +0.9 3,206,654 + +0.5 3,206,654 + -0.1 3,206,660 - -0.1 3,206,706 + +0.9 3,206,707 - -0.7 3,206,707 - -0.5 3,206,707 - -0.6 3,206,720 + +1.4 3,206,720 + +0.8 3,206,721 - +0.1 3,206,753 + +0.7 3,206,890 - +0.6 3,207,054 + IAI46_15325 0.18 +1.0 3,207,130 - IAI46_15325 0.23 +1.7
Or see this region's nucleotide sequence