Experiment: No stress control, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14355 and IAI46_14360 are separated by 80 nucleotides IAI46_14360 and IAI46_14365 are separated by 114 nucleotides
IAI46_14355: IAI46_14355 - glyceraldehyde-3-phosphate dehydrogenase, at 3,045,167 to 3,046,162
_14355
IAI46_14360: IAI46_14360 - D-hexose-6-phosphate mutarotase, at 3,046,243 to 3,047,118
_14360
IAI46_14365: IAI46_14365 - MipA/OmpV family protein, at 3,047,233 to 3,047,937
_14365
Position (kb)
3046
3047
3048 Strain fitness (log2 ratio)
-2
-1
0
1 at 3046.291 kb on + strand at 3046.291 kb on + strand at 3046.292 kb on - strand at 3046.294 kb on - strand at 3046.350 kb on - strand, within IAI46_14360 at 3046.725 kb on + strand, within IAI46_14360 at 3046.726 kb on - strand, within IAI46_14360 at 3046.726 kb on - strand, within IAI46_14360 at 3046.726 kb on - strand, within IAI46_14360 at 3046.726 kb on - strand, within IAI46_14360 at 3046.726 kb on - strand, within IAI46_14360 at 3046.730 kb on - strand, within IAI46_14360 at 3046.759 kb on - strand, within IAI46_14360 at 3046.763 kb on + strand, within IAI46_14360 at 3046.784 kb on - strand, within IAI46_14360 at 3046.786 kb on - strand, within IAI46_14360 at 3046.889 kb on + strand, within IAI46_14360 at 3046.967 kb on + strand, within IAI46_14360 at 3047.009 kb on - strand, within IAI46_14360 at 3047.162 kb on - strand at 3047.194 kb on + strand at 3047.195 kb on - strand at 3047.204 kb on - strand at 3047.204 kb on - strand at 3047.261 kb on - strand at 3047.325 kb on - strand, within IAI46_14365 at 3047.325 kb on - strand, within IAI46_14365 at 3047.325 kb on - strand, within IAI46_14365 at 3047.335 kb on - strand, within IAI46_14365 at 3047.388 kb on - strand, within IAI46_14365 at 3047.413 kb on - strand, within IAI46_14365 at 3047.415 kb on - strand, within IAI46_14365 at 3047.415 kb on - strand, within IAI46_14365 at 3047.463 kb on - strand, within IAI46_14365 at 3047.463 kb on - strand, within IAI46_14365 at 3047.465 kb on + strand, within IAI46_14365 at 3047.465 kb on + strand, within IAI46_14365 at 3047.547 kb on - strand, within IAI46_14365 at 3047.604 kb on + strand, within IAI46_14365 at 3047.635 kb on - strand, within IAI46_14365 at 3047.820 kb on - strand, within IAI46_14365 at 3047.820 kb on - strand, within IAI46_14365 at 3047.820 kb on - strand, within IAI46_14365 at 3048.010 kb on + strand at 3048.011 kb on - strand at 3048.014 kb on - strand at 3048.014 kb on - strand at 3048.014 kb on - strand at 3048.022 kb on + strand at 3048.089 kb on + strand at 3048.090 kb on - strand at 3048.090 kb on - strand at 3048.108 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, anaerobic remove 3,046,291 + -0.7 3,046,291 + +1.4 3,046,292 - -0.9 3,046,294 - -0.8 3,046,350 - IAI46_14360 0.12 +1.0 3,046,725 + IAI46_14360 0.55 -0.6 3,046,726 - IAI46_14360 0.55 +0.5 3,046,726 - IAI46_14360 0.55 +0.1 3,046,726 - IAI46_14360 0.55 +1.7 3,046,726 - IAI46_14360 0.55 +0.2 3,046,726 - IAI46_14360 0.55 -1.0 3,046,730 - IAI46_14360 0.56 +0.0 3,046,759 - IAI46_14360 0.59 +1.1 3,046,763 + IAI46_14360 0.59 -0.6 3,046,784 - IAI46_14360 0.62 -1.6 3,046,786 - IAI46_14360 0.62 +0.7 3,046,889 + IAI46_14360 0.74 +0.5 3,046,967 + IAI46_14360 0.83 -0.2 3,047,009 - IAI46_14360 0.87 +0.7 3,047,162 - +1.1 3,047,194 + +1.2 3,047,195 - +0.8 3,047,204 - +0.0 3,047,204 - +0.9 3,047,261 - -0.8 3,047,325 - IAI46_14365 0.13 -0.0 3,047,325 - IAI46_14365 0.13 +0.6 3,047,325 - IAI46_14365 0.13 +0.1 3,047,335 - IAI46_14365 0.14 -1.3 3,047,388 - IAI46_14365 0.22 -0.6 3,047,413 - IAI46_14365 0.26 -0.4 3,047,415 - IAI46_14365 0.26 -0.2 3,047,415 - IAI46_14365 0.26 -0.1 3,047,463 - IAI46_14365 0.33 -0.8 3,047,463 - IAI46_14365 0.33 +0.4 3,047,465 + IAI46_14365 0.33 -0.6 3,047,465 + IAI46_14365 0.33 +1.0 3,047,547 - IAI46_14365 0.45 -0.6 3,047,604 + IAI46_14365 0.53 -1.5 3,047,635 - IAI46_14365 0.57 +1.0 3,047,820 - IAI46_14365 0.83 -0.0 3,047,820 - IAI46_14365 0.83 +1.0 3,047,820 - IAI46_14365 0.83 +0.8 3,048,010 + +1.0 3,048,011 - -0.5 3,048,014 - -1.1 3,048,014 - -1.1 3,048,014 - -0.3 3,048,022 + +0.5 3,048,089 + -2.0 3,048,090 - +0.1 3,048,090 - -0.0 3,048,108 - -1.4
Or see this region's nucleotide sequence