Experiment: No stress control, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_13905 and IAI46_13910 are separated by 207 nucleotides IAI46_13910 and IAI46_13915 are separated by 10 nucleotides IAI46_13915 and IAI46_13920 are separated by 328 nucleotides IAI46_13920 and IAI46_13925 are separated by 170 nucleotides
IAI46_13905: IAI46_13905 - osmotically-inducible lipoprotein OsmB, at 2,955,210 to 2,955,428
_13905
IAI46_13910: IAI46_13910 - stress response translation initiation inhibitor YciH, at 2,955,636 to 2,955,962
_13910
IAI46_13915: IAI46_13915 - orotidine-5'-phosphate decarboxylase, at 2,955,973 to 2,956,701
_13915
IAI46_13920: IAI46_13920 - DUF1471 domain-containing protein, at 2,957,030 to 2,957,290
_13920
IAI46_13925: IAI46_13925 - Arc family DNA-binding protein, at 2,957,461 to 2,957,757
_13925
Position (kb)
2955
2956
2957 Strain fitness (log2 ratio)
-2
-1
0
1 at 2954.980 kb on + strand at 2954.984 kb on + strand at 2955.001 kb on + strand at 2955.040 kb on - strand at 2955.040 kb on - strand at 2955.163 kb on - strand at 2955.164 kb on + strand at 2955.164 kb on + strand at 2955.165 kb on - strand at 2955.168 kb on + strand at 2955.168 kb on + strand at 2955.168 kb on + strand at 2955.209 kb on + strand at 2955.224 kb on + strand at 2955.423 kb on - strand at 2955.426 kb on + strand at 2955.492 kb on + strand at 2955.493 kb on - strand at 2955.504 kb on + strand at 2955.527 kb on + strand at 2955.597 kb on + strand at 2955.598 kb on - strand at 2955.915 kb on - strand, within IAI46_13910 at 2955.915 kb on - strand, within IAI46_13910 at 2955.934 kb on + strand at 2955.934 kb on + strand at 2955.935 kb on - strand at 2956.052 kb on + strand, within IAI46_13915 at 2956.052 kb on + strand, within IAI46_13915 at 2956.052 kb on + strand, within IAI46_13915 at 2956.053 kb on - strand, within IAI46_13915 at 2956.053 kb on - strand, within IAI46_13915 at 2956.053 kb on - strand, within IAI46_13915 at 2956.634 kb on + strand at 2956.729 kb on - strand at 2956.732 kb on + strand at 2956.732 kb on + strand at 2956.767 kb on - strand at 2956.816 kb on - strand at 2956.832 kb on - strand at 2956.832 kb on - strand at 2956.880 kb on + strand at 2956.992 kb on + strand at 2957.013 kb on - strand at 2957.229 kb on - strand, within IAI46_13920 at 2957.252 kb on - strand, within IAI46_13920 at 2957.278 kb on + strand at 2957.283 kb on - strand at 2957.288 kb on + strand at 2957.288 kb on + strand at 2957.289 kb on - strand at 2957.294 kb on - strand at 2957.294 kb on - strand at 2957.297 kb on - strand at 2957.300 kb on + strand at 2957.301 kb on - strand at 2957.301 kb on - strand at 2957.330 kb on - strand at 2957.424 kb on + strand at 2957.471 kb on + strand at 2957.475 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, anaerobic remove 2,954,980 + -0.7 2,954,984 + +0.6 2,955,001 + +0.3 2,955,040 - +0.7 2,955,040 - -0.2 2,955,163 - -1.1 2,955,164 + -0.1 2,955,164 + +0.9 2,955,165 - -0.4 2,955,168 + -0.3 2,955,168 + -0.0 2,955,168 + +1.0 2,955,209 + -2.0 2,955,224 + +0.3 2,955,423 - -0.2 2,955,426 + +0.2 2,955,492 + +0.5 2,955,493 - -0.1 2,955,504 + +0.6 2,955,527 + +0.1 2,955,597 + +0.7 2,955,598 - +0.4 2,955,915 - IAI46_13910 0.85 +0.2 2,955,915 - IAI46_13910 0.85 -0.9 2,955,934 + -0.6 2,955,934 + -2.4 2,955,935 - +0.6 2,956,052 + IAI46_13915 0.11 -2.3 2,956,052 + IAI46_13915 0.11 -1.3 2,956,052 + IAI46_13915 0.11 -0.2 2,956,053 - IAI46_13915 0.11 -1.7 2,956,053 - IAI46_13915 0.11 -0.9 2,956,053 - IAI46_13915 0.11 -0.4 2,956,634 + +0.7 2,956,729 - -0.3 2,956,732 + -0.4 2,956,732 + +0.3 2,956,767 - -0.0 2,956,816 - -0.8 2,956,832 - -0.4 2,956,832 - -0.4 2,956,880 + -0.7 2,956,992 + +1.3 2,957,013 - +0.7 2,957,229 - IAI46_13920 0.76 -0.9 2,957,252 - IAI46_13920 0.85 -1.1 2,957,278 + -0.5 2,957,283 - +0.3 2,957,288 + +1.1 2,957,288 + -0.9 2,957,289 - -1.5 2,957,294 - +0.6 2,957,294 - +0.7 2,957,297 - +0.0 2,957,300 + -0.3 2,957,301 - +0.3 2,957,301 - -0.5 2,957,330 - +0.4 2,957,424 + +0.1 2,957,471 + -0.2 2,957,475 + +0.7
Or see this region's nucleotide sequence