Experiment: No stress control, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11780 and IAI46_11785 overlap by 4 nucleotides IAI46_11785 and IAI46_11790 overlap by 8 nucleotides
IAI46_11780: IAI46_11780 - guanine deaminase, at 2,486,297 to 2,487,628
_11780
IAI46_11785: IAI46_11785 - xanthine dehydrogenase small subunit, at 2,487,625 to 2,489,055
_11785
IAI46_11790: IAI46_11790 - xanthine dehydrogenase molybdopterin binding subunit, at 2,489,048 to 2,491,450
_11790
Position (kb)
2487
2488
2489
2490 Strain fitness (log2 ratio)
-1
0
1 at 2486.683 kb on - strand, within IAI46_11780 at 2486.710 kb on - strand, within IAI46_11780 at 2486.901 kb on - strand, within IAI46_11780 at 2487.292 kb on + strand, within IAI46_11780 at 2487.320 kb on + strand, within IAI46_11780 at 2487.320 kb on + strand, within IAI46_11780 at 2487.320 kb on + strand, within IAI46_11780 at 2487.575 kb on + strand at 2487.576 kb on - strand at 2488.003 kb on + strand, within IAI46_11785 at 2488.332 kb on + strand, within IAI46_11785 at 2488.435 kb on + strand, within IAI46_11785 at 2488.436 kb on - strand, within IAI46_11785 at 2488.550 kb on + strand, within IAI46_11785 at 2488.767 kb on + strand, within IAI46_11785 at 2488.929 kb on + strand at 2489.053 kb on + strand at 2489.053 kb on + strand at 2489.181 kb on - strand at 2489.181 kb on - strand at 2489.282 kb on + strand at 2489.326 kb on - strand, within IAI46_11790 at 2489.384 kb on - strand, within IAI46_11790 at 2489.393 kb on + strand, within IAI46_11790 at 2489.394 kb on - strand, within IAI46_11790 at 2489.394 kb on - strand, within IAI46_11790 at 2489.474 kb on + strand, within IAI46_11790 at 2489.942 kb on + strand, within IAI46_11790
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, anaerobic remove 2,486,683 - IAI46_11780 0.29 -0.4 2,486,710 - IAI46_11780 0.31 -0.1 2,486,901 - IAI46_11780 0.45 -0.5 2,487,292 + IAI46_11780 0.75 -0.3 2,487,320 + IAI46_11780 0.77 -1.0 2,487,320 + IAI46_11780 0.77 -0.5 2,487,320 + IAI46_11780 0.77 +0.8 2,487,575 + +0.7 2,487,576 - +1.0 2,488,003 + IAI46_11785 0.26 -0.5 2,488,332 + IAI46_11785 0.49 +0.4 2,488,435 + IAI46_11785 0.57 -1.4 2,488,436 - IAI46_11785 0.57 +0.0 2,488,550 + IAI46_11785 0.65 -0.7 2,488,767 + IAI46_11785 0.80 -0.1 2,488,929 + +0.6 2,489,053 + +0.8 2,489,053 + -0.7 2,489,181 - +0.6 2,489,181 - -0.2 2,489,282 + +1.3 2,489,326 - IAI46_11790 0.12 -1.0 2,489,384 - IAI46_11790 0.14 -0.2 2,489,393 + IAI46_11790 0.14 +1.0 2,489,394 - IAI46_11790 0.14 +0.9 2,489,394 - IAI46_11790 0.14 +0.4 2,489,474 + IAI46_11790 0.18 -1.2 2,489,942 + IAI46_11790 0.37 +1.2
Or see this region's nucleotide sequence