Experiment: No stress control, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_08125 and IAI46_08130 overlap by 1 nucleotides IAI46_08130 and IAI46_08135 are separated by 31 nucleotides IAI46_08135 and IAI46_08140 are separated by 7 nucleotides
IAI46_08125: IAI46_08125 - ABC transporter permease, at 1,727,860 to 1,728,627
_08125
IAI46_08130: IAI46_08130 - ABC transporter ATP-binding protein, at 1,728,627 to 1,729,367
_08130
IAI46_08135: IAI46_08135 - DUF4422 domain-containing protein, at 1,729,399 to 1,731,297
_08135
IAI46_08140: IAI46_08140 - UDP-galactopyranose mutase, at 1,731,305 to 1,732,459
_08140
Position (kb) 1729
1730
1731
1732 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1728.625 kb on + strand at 1728.809 kb on + strand, within IAI46_08130 at 1728.863 kb on - strand, within IAI46_08130 at 1728.983 kb on - strand, within IAI46_08130 at 1729.138 kb on + strand, within IAI46_08130 at 1729.472 kb on + strand at 1729.837 kb on + strand, within IAI46_08135 at 1730.555 kb on + strand, within IAI46_08135 at 1730.698 kb on + strand, within IAI46_08135 at 1730.859 kb on + strand, within IAI46_08135 at 1730.859 kb on + strand, within IAI46_08135 at 1730.948 kb on + strand, within IAI46_08135 at 1731.062 kb on - strand, within IAI46_08135 at 1731.103 kb on + strand, within IAI46_08135 at 1731.128 kb on + strand at 1731.159 kb on + strand at 1731.214 kb on - strand at 1731.265 kb on + strand at 1731.469 kb on + strand, within IAI46_08140 at 1731.469 kb on + strand, within IAI46_08140 at 1731.469 kb on + strand, within IAI46_08140 at 1731.470 kb on - strand, within IAI46_08140 at 1731.473 kb on + strand, within IAI46_08140 at 1731.473 kb on + strand, within IAI46_08140 at 1731.474 kb on - strand, within IAI46_08140 at 1731.530 kb on + strand, within IAI46_08140 at 1731.548 kb on + strand, within IAI46_08140 at 1731.548 kb on + strand, within IAI46_08140 at 1731.610 kb on + strand, within IAI46_08140 at 1731.610 kb on + strand, within IAI46_08140 at 1731.664 kb on - strand, within IAI46_08140 at 1731.691 kb on + strand, within IAI46_08140 at 1731.768 kb on - strand, within IAI46_08140 at 1731.768 kb on - strand, within IAI46_08140 at 1731.769 kb on + strand, within IAI46_08140 at 1731.769 kb on + strand, within IAI46_08140 at 1731.769 kb on + strand, within IAI46_08140 at 1731.769 kb on + strand, within IAI46_08140 at 1731.853 kb on + strand, within IAI46_08140 at 1731.857 kb on + strand, within IAI46_08140 at 1731.896 kb on + strand, within IAI46_08140 at 1731.921 kb on + strand, within IAI46_08140 at 1731.942 kb on + strand, within IAI46_08140 at 1731.954 kb on + strand, within IAI46_08140 at 1731.983 kb on + strand, within IAI46_08140 at 1731.983 kb on + strand, within IAI46_08140 at 1731.983 kb on + strand, within IAI46_08140 at 1732.054 kb on + strand, within IAI46_08140 at 1732.115 kb on + strand, within IAI46_08140 at 1732.241 kb on + strand, within IAI46_08140 at 1732.242 kb on - strand, within IAI46_08140 at 1732.244 kb on + strand, within IAI46_08140
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, anaerobic remove 1,728,625 + +1.2 1,728,809 + IAI46_08130 0.25 -0.6 1,728,863 - IAI46_08130 0.32 -1.4 1,728,983 - IAI46_08130 0.48 -1.4 1,729,138 + IAI46_08130 0.69 +0.2 1,729,472 + +1.5 1,729,837 + IAI46_08135 0.23 +2.0 1,730,555 + IAI46_08135 0.61 +0.9 1,730,698 + IAI46_08135 0.68 +0.6 1,730,859 + IAI46_08135 0.77 +1.3 1,730,859 + IAI46_08135 0.77 +0.4 1,730,948 + IAI46_08135 0.82 +0.8 1,731,062 - IAI46_08135 0.88 +1.0 1,731,103 + IAI46_08135 0.90 -0.7 1,731,128 + +1.0 1,731,159 + +1.3 1,731,214 - +0.4 1,731,265 + +0.2 1,731,469 + IAI46_08140 0.14 +0.4 1,731,469 + IAI46_08140 0.14 +0.5 1,731,469 + IAI46_08140 0.14 -0.4 1,731,470 - IAI46_08140 0.14 -0.0 1,731,473 + IAI46_08140 0.15 -0.3 1,731,473 + IAI46_08140 0.15 +1.4 1,731,474 - IAI46_08140 0.15 +1.0 1,731,530 + IAI46_08140 0.19 +0.6 1,731,548 + IAI46_08140 0.21 +0.7 1,731,548 + IAI46_08140 0.21 -1.1 1,731,610 + IAI46_08140 0.26 +0.5 1,731,610 + IAI46_08140 0.26 -1.8 1,731,664 - IAI46_08140 0.31 -1.7 1,731,691 + IAI46_08140 0.33 -0.3 1,731,768 - IAI46_08140 0.40 +0.2 1,731,768 - IAI46_08140 0.40 +0.9 1,731,769 + IAI46_08140 0.40 +0.3 1,731,769 + IAI46_08140 0.40 -1.0 1,731,769 + IAI46_08140 0.40 +0.1 1,731,769 + IAI46_08140 0.40 -0.0 1,731,853 + IAI46_08140 0.47 -0.5 1,731,857 + IAI46_08140 0.48 +1.3 1,731,896 + IAI46_08140 0.51 -0.1 1,731,921 + IAI46_08140 0.53 +0.1 1,731,942 + IAI46_08140 0.55 +1.0 1,731,954 + IAI46_08140 0.56 +0.6 1,731,983 + IAI46_08140 0.59 +0.4 1,731,983 + IAI46_08140 0.59 +1.0 1,731,983 + IAI46_08140 0.59 +0.0 1,732,054 + IAI46_08140 0.65 +1.5 1,732,115 + IAI46_08140 0.70 +1.2 1,732,241 + IAI46_08140 0.81 +0.4 1,732,242 - IAI46_08140 0.81 +0.2 1,732,244 + IAI46_08140 0.81 -0.4
Or see this region's nucleotide sequence