Experiment: No stress control, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_07405 and IAI46_07410 are separated by 215 nucleotides IAI46_07410 and IAI46_07415 are separated by 2 nucleotides IAI46_07415 and IAI46_07420 are separated by 98 nucleotides IAI46_07420 and IAI46_07425 are separated by 21 nucleotides
IAI46_07405: IAI46_07405 - MFS transporter, at 1,565,966 to 1,567,369
_07405
IAI46_07410: IAI46_07410 - helix-turn-helix transcriptional regulator, at 1,567,585 to 1,568,154
_07410
IAI46_07415: IAI46_07415 - GNAT family N-acetyltransferase, at 1,568,157 to 1,568,681
_07415
IAI46_07420: IAI46_07420 - 5'-nucleotidase, lipoprotein e(P4) family, at 1,568,780 to 1,569,610
_07420
IAI46_07425: IAI46_07425 - GNAT family N-acetyltransferase, at 1,569,632 to 1,570,480
_07425
Position (kb)
1568
1569 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1567.460 kb on + strand at 1567.461 kb on - strand at 1567.461 kb on - strand at 1567.486 kb on + strand at 1567.487 kb on - strand at 1567.488 kb on + strand at 1567.503 kb on + strand at 1567.503 kb on + strand at 1567.503 kb on + strand at 1567.504 kb on - strand at 1567.508 kb on + strand at 1567.508 kb on + strand at 1567.509 kb on - strand at 1567.575 kb on + strand at 1567.576 kb on - strand at 1567.889 kb on + strand, within IAI46_07410 at 1567.909 kb on + strand, within IAI46_07410 at 1567.909 kb on + strand, within IAI46_07410 at 1567.910 kb on - strand, within IAI46_07410 at 1567.910 kb on - strand, within IAI46_07410 at 1567.910 kb on - strand, within IAI46_07410 at 1567.960 kb on + strand, within IAI46_07410 at 1567.976 kb on + strand, within IAI46_07410 at 1567.977 kb on - strand, within IAI46_07410 at 1567.997 kb on + strand, within IAI46_07410 at 1568.051 kb on + strand, within IAI46_07410 at 1568.128 kb on + strand at 1568.128 kb on + strand at 1568.128 kb on + strand at 1568.153 kb on - strand at 1568.153 kb on - strand at 1568.168 kb on - strand at 1568.382 kb on - strand, within IAI46_07415 at 1568.402 kb on + strand, within IAI46_07415 at 1568.403 kb on - strand, within IAI46_07415 at 1568.533 kb on + strand, within IAI46_07415 at 1568.533 kb on + strand, within IAI46_07415 at 1568.534 kb on - strand, within IAI46_07415 at 1568.534 kb on - strand, within IAI46_07415 at 1568.578 kb on - strand, within IAI46_07415 at 1568.661 kb on + strand at 1568.663 kb on + strand at 1568.663 kb on + strand at 1568.663 kb on + strand at 1568.663 kb on + strand at 1568.664 kb on - strand at 1568.664 kb on - strand at 1568.664 kb on - strand at 1568.664 kb on - strand at 1568.664 kb on - strand at 1568.664 kb on - strand at 1568.667 kb on + strand at 1568.668 kb on - strand at 1568.669 kb on + strand at 1568.669 kb on + strand at 1568.670 kb on - strand at 1568.712 kb on + strand at 1568.726 kb on + strand at 1568.727 kb on - strand at 1568.781 kb on + strand at 1568.781 kb on + strand at 1568.781 kb on + strand at 1568.848 kb on + strand at 1568.849 kb on - strand at 1568.850 kb on + strand at 1568.851 kb on - strand at 1568.851 kb on - strand at 1568.851 kb on - strand at 1568.883 kb on + strand, within IAI46_07420 at 1568.962 kb on + strand, within IAI46_07420 at 1568.973 kb on + strand, within IAI46_07420 at 1568.974 kb on - strand, within IAI46_07420 at 1569.073 kb on + strand, within IAI46_07420 at 1569.074 kb on - strand, within IAI46_07420 at 1569.074 kb on - strand, within IAI46_07420 at 1569.074 kb on - strand, within IAI46_07420 at 1569.084 kb on - strand, within IAI46_07420 at 1569.329 kb on - strand, within IAI46_07420 at 1569.533 kb on + strand at 1569.600 kb on - strand at 1569.615 kb on - strand at 1569.633 kb on + strand at 1569.634 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, anaerobic remove 1,567,460 + +1.0 1,567,461 - +1.5 1,567,461 - +0.8 1,567,486 + -0.9 1,567,487 - +0.5 1,567,488 + -0.9 1,567,503 + -0.9 1,567,503 + -0.5 1,567,503 + +0.3 1,567,504 - -1.3 1,567,508 + -0.6 1,567,508 + +0.9 1,567,509 - +1.4 1,567,575 + -0.2 1,567,576 - +0.1 1,567,889 + IAI46_07410 0.53 +0.6 1,567,909 + IAI46_07410 0.57 +1.8 1,567,909 + IAI46_07410 0.57 -0.8 1,567,910 - IAI46_07410 0.57 +1.2 1,567,910 - IAI46_07410 0.57 +0.9 1,567,910 - IAI46_07410 0.57 -1.6 1,567,960 + IAI46_07410 0.66 +0.0 1,567,976 + IAI46_07410 0.69 +0.4 1,567,977 - IAI46_07410 0.69 +0.5 1,567,997 + IAI46_07410 0.72 -2.1 1,568,051 + IAI46_07410 0.82 +0.6 1,568,128 + +0.3 1,568,128 + +1.3 1,568,128 + -0.7 1,568,153 - -0.7 1,568,153 - +0.3 1,568,168 - +0.1 1,568,382 - IAI46_07415 0.43 -1.4 1,568,402 + IAI46_07415 0.47 +0.9 1,568,403 - IAI46_07415 0.47 -0.3 1,568,533 + IAI46_07415 0.72 +1.1 1,568,533 + IAI46_07415 0.72 -1.4 1,568,534 - IAI46_07415 0.72 +0.4 1,568,534 - IAI46_07415 0.72 +0.7 1,568,578 - IAI46_07415 0.80 +0.9 1,568,661 + -0.3 1,568,663 + +0.3 1,568,663 + +0.0 1,568,663 + -0.6 1,568,663 + -0.3 1,568,664 - +1.2 1,568,664 - -0.2 1,568,664 - +0.6 1,568,664 - +0.2 1,568,664 - -0.9 1,568,664 - +1.0 1,568,667 + +0.2 1,568,668 - -2.8 1,568,669 + -0.3 1,568,669 + -0.2 1,568,670 - -1.2 1,568,712 + +0.1 1,568,726 + -0.8 1,568,727 - -0.9 1,568,781 + -1.0 1,568,781 + -0.5 1,568,781 + -2.2 1,568,848 + -1.1 1,568,849 - +0.2 1,568,850 + +0.0 1,568,851 - +0.1 1,568,851 - -0.6 1,568,851 - -1.2 1,568,883 + IAI46_07420 0.12 +0.7 1,568,962 + IAI46_07420 0.22 -0.1 1,568,973 + IAI46_07420 0.23 -0.2 1,568,974 - IAI46_07420 0.23 +0.9 1,569,073 + IAI46_07420 0.35 +0.7 1,569,074 - IAI46_07420 0.35 +0.7 1,569,074 - IAI46_07420 0.35 -0.3 1,569,074 - IAI46_07420 0.35 +1.0 1,569,084 - IAI46_07420 0.37 +0.6 1,569,329 - IAI46_07420 0.66 +0.1 1,569,533 + +0.4 1,569,600 - +0.2 1,569,615 - -0.4 1,569,633 + +0.1 1,569,634 - -0.1
Or see this region's nucleotide sequence