Experiment: No stress control, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_04455 and IAI46_04460 are separated by 459 nucleotides IAI46_04460 and IAI46_04465 are separated by 101 nucleotides
IAI46_04455: IAI46_04455 - DUF1471 domain-containing protein, at 953,805 to 954,059
_04455
IAI46_04460: IAI46_04460 - condensation protein, at 954,519 to 955,865
_04460
IAI46_04465: IAI46_04465 - amino acid adenylation domain-containing protein, at 955,967 to 959,062
_04465
Position (kb) 954
955
956 Strain fitness (log2 ratio) -2
-1
0
1
2 at 953.577 kb on + strand at 953.578 kb on - strand at 953.666 kb on - strand at 953.668 kb on - strand at 953.673 kb on + strand at 953.673 kb on + strand at 953.673 kb on + strand at 953.673 kb on + strand at 953.674 kb on - strand at 953.674 kb on - strand at 953.677 kb on + strand at 953.677 kb on + strand at 953.677 kb on + strand at 953.715 kb on + strand at 953.751 kb on + strand at 953.751 kb on + strand at 953.751 kb on + strand at 953.751 kb on + strand at 953.752 kb on - strand at 953.752 kb on - strand at 953.790 kb on + strand at 953.790 kb on + strand at 953.791 kb on - strand at 953.802 kb on + strand at 953.802 kb on + strand at 953.803 kb on - strand at 953.805 kb on - strand at 953.805 kb on - strand at 953.816 kb on + strand at 953.820 kb on + strand at 953.997 kb on + strand, within IAI46_04455 at 954.005 kb on + strand, within IAI46_04455 at 954.051 kb on + strand at 954.057 kb on + strand at 954.090 kb on + strand at 954.134 kb on + strand at 954.156 kb on - strand at 954.156 kb on - strand at 954.334 kb on + strand at 954.334 kb on + strand at 954.334 kb on + strand at 954.335 kb on - strand at 954.375 kb on + strand at 954.375 kb on + strand at 954.375 kb on + strand at 954.375 kb on + strand at 954.376 kb on - strand at 954.376 kb on - strand at 954.376 kb on - strand at 954.376 kb on - strand at 954.378 kb on + strand at 954.378 kb on + strand at 954.379 kb on - strand at 954.379 kb on - strand at 954.431 kb on + strand at 954.432 kb on - strand at 954.495 kb on + strand at 954.511 kb on + strand at 954.512 kb on - strand at 954.515 kb on + strand at 954.516 kb on - strand at 954.516 kb on - strand at 954.516 kb on - strand at 954.516 kb on - strand at 954.591 kb on - strand at 954.591 kb on - strand at 954.640 kb on + strand at 954.640 kb on + strand at 954.641 kb on - strand at 954.793 kb on + strand, within IAI46_04460 at 954.793 kb on + strand, within IAI46_04460 at 954.794 kb on + strand, within IAI46_04460 at 954.830 kb on + strand, within IAI46_04460 at 954.871 kb on + strand, within IAI46_04460 at 954.871 kb on + strand, within IAI46_04460 at 954.933 kb on + strand, within IAI46_04460 at 954.934 kb on - strand, within IAI46_04460 at 954.950 kb on + strand, within IAI46_04460 at 954.951 kb on - strand, within IAI46_04460 at 954.951 kb on - strand, within IAI46_04460 at 954.951 kb on - strand, within IAI46_04460 at 955.005 kb on + strand, within IAI46_04460 at 955.006 kb on - strand, within IAI46_04460 at 955.006 kb on - strand, within IAI46_04460 at 955.007 kb on + strand, within IAI46_04460 at 955.007 kb on + strand, within IAI46_04460 at 955.007 kb on + strand, within IAI46_04460 at 955.083 kb on + strand, within IAI46_04460 at 955.084 kb on - strand, within IAI46_04460 at 955.131 kb on + strand, within IAI46_04460 at 955.131 kb on + strand, within IAI46_04460 at 955.132 kb on - strand, within IAI46_04460 at 955.182 kb on + strand, within IAI46_04460 at 955.182 kb on + strand, within IAI46_04460 at 955.183 kb on - strand, within IAI46_04460 at 955.259 kb on + strand, within IAI46_04460 at 955.260 kb on - strand, within IAI46_04460 at 955.340 kb on + strand, within IAI46_04460 at 955.341 kb on - strand, within IAI46_04460 at 955.341 kb on - strand, within IAI46_04460 at 955.404 kb on - strand, within IAI46_04460 at 955.424 kb on + strand, within IAI46_04460 at 955.425 kb on - strand, within IAI46_04460 at 955.425 kb on - strand, within IAI46_04460 at 955.592 kb on + strand, within IAI46_04460 at 955.640 kb on + strand, within IAI46_04460 at 955.640 kb on + strand, within IAI46_04460 at 955.641 kb on - strand, within IAI46_04460 at 955.651 kb on + strand, within IAI46_04460 at 955.738 kb on - strand at 955.738 kb on - strand at 955.773 kb on + strand at 955.773 kb on + strand at 955.774 kb on - strand at 955.883 kb on + strand at 955.884 kb on - strand at 955.884 kb on - strand at 955.884 kb on - strand at 955.910 kb on + strand at 955.911 kb on - strand at 955.912 kb on + strand at 955.912 kb on + strand at 955.913 kb on - strand at 955.913 kb on - strand at 955.931 kb on - strand at 955.955 kb on - strand at 956.015 kb on + strand at 956.054 kb on - strand at 956.341 kb on + strand, within IAI46_04465 at 956.341 kb on + strand, within IAI46_04465 at 956.341 kb on + strand, within IAI46_04465 at 956.341 kb on + strand, within IAI46_04465 at 956.341 kb on + strand, within IAI46_04465 at 956.342 kb on - strand, within IAI46_04465 at 956.342 kb on - strand, within IAI46_04465 at 956.342 kb on - strand, within IAI46_04465 at 956.412 kb on + strand, within IAI46_04465 at 956.413 kb on - strand, within IAI46_04465 at 956.462 kb on + strand, within IAI46_04465 at 956.479 kb on + strand, within IAI46_04465 at 956.479 kb on + strand, within IAI46_04465 at 956.480 kb on - strand, within IAI46_04465 at 956.480 kb on - strand, within IAI46_04465 at 956.547 kb on + strand, within IAI46_04465 at 956.547 kb on + strand, within IAI46_04465 at 956.576 kb on - strand, within IAI46_04465 at 956.592 kb on + strand, within IAI46_04465 at 956.592 kb on + strand, within IAI46_04465 at 956.592 kb on + strand, within IAI46_04465 at 956.593 kb on - strand, within IAI46_04465 at 956.593 kb on - strand, within IAI46_04465 at 956.595 kb on + strand, within IAI46_04465 at 956.595 kb on + strand, within IAI46_04465 at 956.596 kb on - strand, within IAI46_04465 at 956.612 kb on - strand, within IAI46_04465 at 956.672 kb on + strand, within IAI46_04465 at 956.691 kb on + strand, within IAI46_04465 at 956.691 kb on + strand, within IAI46_04465 at 956.773 kb on + strand, within IAI46_04465 at 956.774 kb on - strand, within IAI46_04465 at 956.774 kb on - strand, within IAI46_04465 at 956.778 kb on + strand, within IAI46_04465 at 956.779 kb on - strand, within IAI46_04465 at 956.779 kb on - strand, within IAI46_04465 at 956.805 kb on + strand, within IAI46_04465 at 956.805 kb on + strand, within IAI46_04465 at 956.806 kb on - strand, within IAI46_04465 at 956.806 kb on - strand, within IAI46_04465 at 956.806 kb on - strand, within IAI46_04465
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, anaerobic remove 953,577 + -0.1 953,578 - +0.2 953,666 - -0.8 953,668 - +0.2 953,673 + +1.4 953,673 + +1.0 953,673 + +0.6 953,673 + +0.3 953,674 - +1.4 953,674 - -0.3 953,677 + +0.1 953,677 + +1.0 953,677 + -0.2 953,715 + +0.2 953,751 + +1.3 953,751 + +0.1 953,751 + -0.6 953,751 + -0.5 953,752 - +0.3 953,752 - -1.3 953,790 + +0.2 953,790 + +0.1 953,791 - -1.0 953,802 + -1.2 953,802 + -0.3 953,803 - +0.7 953,805 - -0.8 953,805 - -0.4 953,816 + +0.0 953,820 + +0.1 953,997 + IAI46_04455 0.75 +0.7 954,005 + IAI46_04455 0.78 +1.2 954,051 + -1.6 954,057 + +0.2 954,090 + +0.2 954,134 + +0.1 954,156 - -0.1 954,156 - +0.3 954,334 + -0.8 954,334 + +0.1 954,334 + +0.2 954,335 - +0.2 954,375 + -0.6 954,375 + -1.0 954,375 + +0.3 954,375 + -0.6 954,376 - +1.0 954,376 - +1.0 954,376 - -0.0 954,376 - -0.6 954,378 + +0.1 954,378 + +0.6 954,379 - -0.3 954,379 - +0.2 954,431 + -0.7 954,432 - +0.9 954,495 + +0.1 954,511 + -1.2 954,512 - -0.6 954,515 + +1.6 954,516 - +0.9 954,516 - -0.9 954,516 - +0.2 954,516 - +0.3 954,591 - +1.4 954,591 - +0.7 954,640 + -1.0 954,640 + +0.9 954,641 - -1.3 954,793 + IAI46_04460 0.20 +0.2 954,793 + IAI46_04460 0.20 -1.5 954,794 + IAI46_04460 0.20 +0.1 954,830 + IAI46_04460 0.23 +0.8 954,871 + IAI46_04460 0.26 -1.0 954,871 + IAI46_04460 0.26 -0.6 954,933 + IAI46_04460 0.31 +1.4 954,934 - IAI46_04460 0.31 +1.0 954,950 + IAI46_04460 0.32 -0.3 954,951 - IAI46_04460 0.32 +0.6 954,951 - IAI46_04460 0.32 +0.3 954,951 - IAI46_04460 0.32 -1.2 955,005 + IAI46_04460 0.36 +0.3 955,006 - IAI46_04460 0.36 -0.2 955,006 - IAI46_04460 0.36 +0.2 955,007 + IAI46_04460 0.36 -0.3 955,007 + IAI46_04460 0.36 -0.1 955,007 + IAI46_04460 0.36 -0.3 955,083 + IAI46_04460 0.42 +0.4 955,084 - IAI46_04460 0.42 +1.0 955,131 + IAI46_04460 0.45 -1.3 955,131 + IAI46_04460 0.45 -0.8 955,132 - IAI46_04460 0.46 -0.1 955,182 + IAI46_04460 0.49 -0.3 955,182 + IAI46_04460 0.49 -0.4 955,183 - IAI46_04460 0.49 +0.2 955,259 + IAI46_04460 0.55 -0.5 955,260 - IAI46_04460 0.55 -1.2 955,340 + IAI46_04460 0.61 +0.7 955,341 - IAI46_04460 0.61 +1.5 955,341 - IAI46_04460 0.61 -0.6 955,404 - IAI46_04460 0.66 +0.3 955,424 + IAI46_04460 0.67 +0.4 955,425 - IAI46_04460 0.67 +0.2 955,425 - IAI46_04460 0.67 +0.2 955,592 + IAI46_04460 0.80 +0.6 955,640 + IAI46_04460 0.83 -0.1 955,640 + IAI46_04460 0.83 +0.2 955,641 - IAI46_04460 0.83 -0.0 955,651 + IAI46_04460 0.84 -0.2 955,738 - +0.4 955,738 - +1.4 955,773 + +0.2 955,773 + -2.1 955,774 - -1.6 955,883 + -2.1 955,884 - -0.6 955,884 - +0.4 955,884 - -0.2 955,910 + -1.0 955,911 - -0.7 955,912 + +0.5 955,912 + +0.1 955,913 - -0.2 955,913 - -0.4 955,931 - -1.1 955,955 - +1.2 956,015 + -0.2 956,054 - +0.4 956,341 + IAI46_04465 0.12 -0.0 956,341 + IAI46_04465 0.12 -0.3 956,341 + IAI46_04465 0.12 -1.7 956,341 + IAI46_04465 0.12 +1.9 956,341 + IAI46_04465 0.12 -0.3 956,342 - IAI46_04465 0.12 +0.2 956,342 - IAI46_04465 0.12 -0.5 956,342 - IAI46_04465 0.12 +0.6 956,412 + IAI46_04465 0.14 +0.7 956,413 - IAI46_04465 0.14 -0.3 956,462 + IAI46_04465 0.16 -0.1 956,479 + IAI46_04465 0.17 -0.4 956,479 + IAI46_04465 0.17 +0.0 956,480 - IAI46_04465 0.17 -0.9 956,480 - IAI46_04465 0.17 +1.2 956,547 + IAI46_04465 0.19 +0.6 956,547 + IAI46_04465 0.19 -0.2 956,576 - IAI46_04465 0.20 -1.9 956,592 + IAI46_04465 0.20 -2.2 956,592 + IAI46_04465 0.20 +0.2 956,592 + IAI46_04465 0.20 +0.6 956,593 - IAI46_04465 0.20 -0.7 956,593 - IAI46_04465 0.20 -0.1 956,595 + IAI46_04465 0.20 -0.3 956,595 + IAI46_04465 0.20 -0.3 956,596 - IAI46_04465 0.20 -1.8 956,612 - IAI46_04465 0.21 +0.7 956,672 + IAI46_04465 0.23 -0.2 956,691 + IAI46_04465 0.23 -0.1 956,691 + IAI46_04465 0.23 +0.7 956,773 + IAI46_04465 0.26 -0.1 956,774 - IAI46_04465 0.26 +0.3 956,774 - IAI46_04465 0.26 -0.9 956,778 + IAI46_04465 0.26 -0.2 956,779 - IAI46_04465 0.26 +0.4 956,779 - IAI46_04465 0.26 -0.1 956,805 + IAI46_04465 0.27 -2.5 956,805 + IAI46_04465 0.27 +0.1 956,806 - IAI46_04465 0.27 +0.7 956,806 - IAI46_04465 0.27 -0.8 956,806 - IAI46_04465 0.27 +0.9
Or see this region's nucleotide sequence