Experiment: No stress control, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_00725 and IAI46_00730 overlap by 1 nucleotides IAI46_00730 and IAI46_00735 are separated by 77 nucleotides IAI46_00735 and IAI46_00740 are separated by 56 nucleotides IAI46_00740 and IAI46_00745 are separated by 445 nucleotides
IAI46_00725: IAI46_00725 - tyrosine recombinase XerC, at 165,610 to 166,521
_00725
IAI46_00730: IAI46_00730 - 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB, at 166,521 to 167,237
_00730
IAI46_00735: IAI46_00735 - DNA helicase II, at 167,315 to 169,477
_00735
IAI46_00740: IAI46_00740 - WbuC family cupin fold metalloprotein, at 169,534 to 170,013
_00740
IAI46_00745: IAI46_00745 - magnesium/cobalt transporter CorA, at 170,459 to 171,409
_00745
Position (kb) 167
168
169
170 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 166.369 kb on - strand, within IAI46_00725 at 166.369 kb on - strand, within IAI46_00725 at 166.369 kb on - strand, within IAI46_00725 at 166.444 kb on + strand at 166.445 kb on - strand at 166.480 kb on + strand at 166.530 kb on + strand at 166.531 kb on - strand at 166.584 kb on + strand at 166.644 kb on + strand, within IAI46_00730 at 166.645 kb on - strand, within IAI46_00730 at 166.702 kb on + strand, within IAI46_00730 at 166.703 kb on - strand, within IAI46_00730 at 166.725 kb on + strand, within IAI46_00730 at 166.725 kb on + strand, within IAI46_00730 at 166.872 kb on - strand, within IAI46_00730 at 166.965 kb on + strand, within IAI46_00730 at 166.965 kb on + strand, within IAI46_00730 at 166.966 kb on - strand, within IAI46_00730 at 167.025 kb on + strand, within IAI46_00730 at 167.025 kb on + strand, within IAI46_00730 at 167.025 kb on + strand, within IAI46_00730 at 167.025 kb on + strand, within IAI46_00730 at 167.025 kb on + strand, within IAI46_00730 at 167.026 kb on - strand, within IAI46_00730 at 167.026 kb on - strand, within IAI46_00730 at 167.026 kb on - strand, within IAI46_00730 at 167.026 kb on - strand, within IAI46_00730 at 167.026 kb on - strand, within IAI46_00730 at 167.066 kb on + strand, within IAI46_00730 at 167.067 kb on - strand, within IAI46_00730 at 167.067 kb on - strand, within IAI46_00730 at 167.090 kb on - strand, within IAI46_00730 at 167.090 kb on - strand, within IAI46_00730 at 167.195 kb on + strand at 167.195 kb on + strand at 167.196 kb on - strand at 167.196 kb on - strand at 167.196 kb on - strand at 167.196 kb on - strand at 167.233 kb on + strand at 167.234 kb on - strand at 167.234 kb on - strand at 167.234 kb on - strand at 167.235 kb on + strand at 167.236 kb on - strand at 167.257 kb on + strand at 167.257 kb on + strand at 167.304 kb on + strand at 167.304 kb on + strand at 167.305 kb on - strand at 167.315 kb on - strand at 167.417 kb on - strand at 167.747 kb on + strand, within IAI46_00735 at 167.798 kb on + strand, within IAI46_00735 at 167.799 kb on - strand, within IAI46_00735 at 167.800 kb on + strand, within IAI46_00735 at 167.800 kb on + strand, within IAI46_00735 at 167.803 kb on + strand, within IAI46_00735 at 167.804 kb on - strand, within IAI46_00735 at 167.804 kb on - strand, within IAI46_00735 at 167.830 kb on + strand, within IAI46_00735 at 167.830 kb on + strand, within IAI46_00735 at 167.834 kb on + strand, within IAI46_00735 at 167.957 kb on - strand, within IAI46_00735 at 167.964 kb on + strand, within IAI46_00735 at 167.964 kb on + strand, within IAI46_00735 at 167.965 kb on - strand, within IAI46_00735 at 167.970 kb on + strand, within IAI46_00735 at 167.971 kb on - strand, within IAI46_00735 at 168.002 kb on + strand, within IAI46_00735 at 168.161 kb on + strand, within IAI46_00735 at 168.178 kb on + strand, within IAI46_00735 at 168.178 kb on + strand, within IAI46_00735 at 168.179 kb on - strand, within IAI46_00735 at 168.183 kb on + strand, within IAI46_00735 at 168.230 kb on - strand, within IAI46_00735 at 168.265 kb on + strand, within IAI46_00735 at 168.265 kb on + strand, within IAI46_00735 at 168.265 kb on + strand, within IAI46_00735 at 168.266 kb on - strand, within IAI46_00735 at 168.271 kb on + strand, within IAI46_00735 at 168.272 kb on - strand, within IAI46_00735 at 168.275 kb on + strand, within IAI46_00735 at 168.275 kb on + strand, within IAI46_00735 at 168.275 kb on + strand, within IAI46_00735 at 168.275 kb on + strand, within IAI46_00735 at 168.276 kb on - strand, within IAI46_00735 at 168.379 kb on + strand, within IAI46_00735 at 168.494 kb on + strand, within IAI46_00735 at 168.517 kb on + strand, within IAI46_00735 at 168.518 kb on - strand, within IAI46_00735 at 168.518 kb on - strand, within IAI46_00735 at 168.546 kb on + strand, within IAI46_00735 at 168.546 kb on + strand, within IAI46_00735 at 168.546 kb on + strand, within IAI46_00735 at 168.750 kb on + strand, within IAI46_00735 at 168.750 kb on + strand, within IAI46_00735 at 168.751 kb on - strand, within IAI46_00735 at 168.751 kb on - strand, within IAI46_00735 at 168.791 kb on - strand, within IAI46_00735 at 168.791 kb on - strand, within IAI46_00735 at 168.791 kb on - strand, within IAI46_00735 at 168.794 kb on + strand, within IAI46_00735 at 168.795 kb on - strand, within IAI46_00735 at 168.870 kb on - strand, within IAI46_00735 at 168.875 kb on + strand, within IAI46_00735 at 168.875 kb on + strand, within IAI46_00735 at 168.876 kb on - strand, within IAI46_00735 at 168.963 kb on - strand, within IAI46_00735 at 168.963 kb on - strand, within IAI46_00735 at 169.113 kb on - strand, within IAI46_00735 at 169.154 kb on + strand, within IAI46_00735 at 169.154 kb on + strand, within IAI46_00735 at 169.155 kb on - strand, within IAI46_00735 at 169.176 kb on - strand, within IAI46_00735 at 169.190 kb on + strand, within IAI46_00735 at 169.288 kb on + strand at 169.288 kb on + strand at 169.289 kb on - strand at 169.323 kb on - strand at 169.323 kb on - strand at 169.454 kb on + strand at 169.454 kb on + strand at 169.486 kb on + strand at 169.536 kb on - strand at 169.548 kb on + strand at 169.550 kb on + strand at 169.551 kb on - strand at 169.551 kb on - strand at 169.577 kb on + strand at 169.578 kb on - strand at 169.588 kb on - strand, within IAI46_00740 at 169.588 kb on - strand, within IAI46_00740 at 169.673 kb on - strand, within IAI46_00740 at 169.723 kb on - strand, within IAI46_00740 at 169.741 kb on + strand, within IAI46_00740 at 169.741 kb on + strand, within IAI46_00740 at 169.742 kb on - strand, within IAI46_00740 at 169.794 kb on + strand, within IAI46_00740 at 169.795 kb on - strand, within IAI46_00740 at 169.804 kb on + strand, within IAI46_00740 at 169.804 kb on + strand, within IAI46_00740 at 169.805 kb on - strand, within IAI46_00740 at 169.869 kb on + strand, within IAI46_00740 at 169.871 kb on + strand, within IAI46_00740 at 169.871 kb on + strand, within IAI46_00740 at 169.872 kb on - strand, within IAI46_00740 at 169.872 kb on - strand, within IAI46_00740 at 169.872 kb on - strand, within IAI46_00740 at 169.872 kb on - strand, within IAI46_00740 at 169.872 kb on - strand, within IAI46_00740 at 169.872 kb on - strand, within IAI46_00740 at 169.930 kb on + strand, within IAI46_00740 at 169.931 kb on - strand, within IAI46_00740 at 169.931 kb on - strand, within IAI46_00740 at 170.017 kb on + strand at 170.018 kb on - strand at 170.032 kb on + strand at 170.045 kb on + strand at 170.045 kb on + strand at 170.045 kb on + strand at 170.045 kb on + strand at 170.046 kb on - strand at 170.046 kb on - strand at 170.048 kb on + strand at 170.048 kb on + strand at 170.049 kb on - strand at 170.049 kb on - strand at 170.049 kb on - strand at 170.054 kb on + strand at 170.054 kb on + strand at 170.054 kb on + strand at 170.102 kb on - strand at 170.111 kb on + strand at 170.112 kb on - strand at 170.135 kb on - strand at 170.198 kb on + strand at 170.199 kb on - strand at 170.213 kb on - strand at 170.229 kb on + strand at 170.229 kb on + strand at 170.230 kb on - strand at 170.230 kb on - strand at 170.249 kb on + strand at 170.250 kb on - strand at 170.250 kb on - strand at 170.250 kb on - strand at 170.253 kb on + strand at 170.253 kb on + strand at 170.283 kb on + strand at 170.283 kb on + strand at 170.283 kb on + strand at 170.292 kb on + strand at 170.292 kb on + strand at 170.292 kb on + strand at 170.292 kb on + strand at 170.292 kb on + strand at 170.292 kb on + strand at 170.292 kb on + strand at 170.292 kb on + strand at 170.292 kb on + strand at 170.292 kb on + strand at 170.292 kb on + strand at 170.293 kb on - strand at 170.293 kb on - strand at 170.293 kb on - strand at 170.293 kb on - strand at 170.293 kb on - strand at 170.293 kb on - strand at 170.293 kb on - strand at 170.293 kb on - strand at 170.293 kb on - strand at 170.314 kb on + strand at 170.341 kb on + strand at 170.341 kb on + strand at 170.342 kb on - strand at 170.342 kb on - strand at 170.342 kb on - strand at 170.342 kb on - strand at 170.342 kb on - strand at 170.351 kb on + strand at 170.352 kb on - strand at 170.442 kb on + strand at 170.473 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, anaerobic remove 166,369 - IAI46_00725 0.83 -0.3 166,369 - IAI46_00725 0.83 +0.5 166,369 - IAI46_00725 0.83 +1.2 166,444 + +0.3 166,445 - -0.1 166,480 + +0.2 166,530 + +0.1 166,531 - -1.4 166,584 + -0.1 166,644 + IAI46_00730 0.17 +0.3 166,645 - IAI46_00730 0.17 -1.0 166,702 + IAI46_00730 0.25 -0.4 166,703 - IAI46_00730 0.25 +0.1 166,725 + IAI46_00730 0.28 +0.0 166,725 + IAI46_00730 0.28 -0.6 166,872 - IAI46_00730 0.49 -0.3 166,965 + IAI46_00730 0.62 -0.1 166,965 + IAI46_00730 0.62 +0.2 166,966 - IAI46_00730 0.62 +0.8 167,025 + IAI46_00730 0.70 +0.3 167,025 + IAI46_00730 0.70 -0.9 167,025 + IAI46_00730 0.70 +0.0 167,025 + IAI46_00730 0.70 -0.9 167,025 + IAI46_00730 0.70 -0.6 167,026 - IAI46_00730 0.70 -0.7 167,026 - IAI46_00730 0.70 -1.0 167,026 - IAI46_00730 0.70 +0.8 167,026 - IAI46_00730 0.70 -0.6 167,026 - IAI46_00730 0.70 +0.5 167,066 + IAI46_00730 0.76 -0.3 167,067 - IAI46_00730 0.76 +0.5 167,067 - IAI46_00730 0.76 -0.1 167,090 - IAI46_00730 0.79 -0.1 167,090 - IAI46_00730 0.79 -0.1 167,195 + -0.7 167,195 + -0.2 167,196 - -1.8 167,196 - +0.6 167,196 - -0.9 167,196 - -0.4 167,233 + -0.1 167,234 - +0.5 167,234 - +0.3 167,234 - +0.0 167,235 + +0.9 167,236 - -2.0 167,257 + -0.1 167,257 + +0.3 167,304 + +0.7 167,304 + -0.6 167,305 - -1.2 167,315 - -1.1 167,417 - -1.3 167,747 + IAI46_00735 0.20 -0.1 167,798 + IAI46_00735 0.22 -0.1 167,799 - IAI46_00735 0.22 -0.8 167,800 + IAI46_00735 0.22 -2.4 167,800 + IAI46_00735 0.22 +0.7 167,803 + IAI46_00735 0.23 -1.4 167,804 - IAI46_00735 0.23 -0.5 167,804 - IAI46_00735 0.23 -0.4 167,830 + IAI46_00735 0.24 -1.7 167,830 + IAI46_00735 0.24 -2.3 167,834 + IAI46_00735 0.24 -0.4 167,957 - IAI46_00735 0.30 -1.1 167,964 + IAI46_00735 0.30 -1.0 167,964 + IAI46_00735 0.30 -1.1 167,965 - IAI46_00735 0.30 +1.5 167,970 + IAI46_00735 0.30 -1.4 167,971 - IAI46_00735 0.30 -0.3 168,002 + IAI46_00735 0.32 -1.2 168,161 + IAI46_00735 0.39 +0.9 168,178 + IAI46_00735 0.40 -1.6 168,178 + IAI46_00735 0.40 -2.0 168,179 - IAI46_00735 0.40 -0.9 168,183 + IAI46_00735 0.40 -1.0 168,230 - IAI46_00735 0.42 -1.1 168,265 + IAI46_00735 0.44 -1.5 168,265 + IAI46_00735 0.44 +0.0 168,265 + IAI46_00735 0.44 -1.1 168,266 - IAI46_00735 0.44 -1.5 168,271 + IAI46_00735 0.44 +0.6 168,272 - IAI46_00735 0.44 +1.9 168,275 + IAI46_00735 0.44 -1.2 168,275 + IAI46_00735 0.44 -2.8 168,275 + IAI46_00735 0.44 +0.7 168,275 + IAI46_00735 0.44 -0.1 168,276 - IAI46_00735 0.44 -1.2 168,379 + IAI46_00735 0.49 -2.4 168,494 + IAI46_00735 0.55 -0.3 168,517 + IAI46_00735 0.56 +0.4 168,518 - IAI46_00735 0.56 -0.4 168,518 - IAI46_00735 0.56 +0.2 168,546 + IAI46_00735 0.57 -0.5 168,546 + IAI46_00735 0.57 -1.5 168,546 + IAI46_00735 0.57 -0.3 168,750 + IAI46_00735 0.66 -1.4 168,750 + IAI46_00735 0.66 +1.8 168,751 - IAI46_00735 0.66 -0.1 168,751 - IAI46_00735 0.66 -0.1 168,791 - IAI46_00735 0.68 -1.1 168,791 - IAI46_00735 0.68 -1.9 168,791 - IAI46_00735 0.68 +0.5 168,794 + IAI46_00735 0.68 -0.5 168,795 - IAI46_00735 0.68 -0.3 168,870 - IAI46_00735 0.72 +1.5 168,875 + IAI46_00735 0.72 -0.1 168,875 + IAI46_00735 0.72 -0.7 168,876 - IAI46_00735 0.72 -0.3 168,963 - IAI46_00735 0.76 -0.5 168,963 - IAI46_00735 0.76 +1.0 169,113 - IAI46_00735 0.83 +0.8 169,154 + IAI46_00735 0.85 -1.1 169,154 + IAI46_00735 0.85 -0.8 169,155 - IAI46_00735 0.85 -2.0 169,176 - IAI46_00735 0.86 +0.5 169,190 + IAI46_00735 0.87 -1.6 169,288 + -0.1 169,288 + +0.9 169,289 - -0.2 169,323 - +0.1 169,323 - +0.1 169,454 + -1.9 169,454 + +2.2 169,486 + -0.3 169,536 - -0.5 169,548 + -1.5 169,550 + -1.2 169,551 - -1.3 169,551 - -0.3 169,577 + +0.8 169,578 - +0.7 169,588 - IAI46_00740 0.11 -0.9 169,588 - IAI46_00740 0.11 +0.2 169,673 - IAI46_00740 0.29 +0.0 169,723 - IAI46_00740 0.39 +0.7 169,741 + IAI46_00740 0.43 -0.5 169,741 + IAI46_00740 0.43 +0.2 169,742 - IAI46_00740 0.43 +0.5 169,794 + IAI46_00740 0.54 -0.4 169,795 - IAI46_00740 0.54 +0.9 169,804 + IAI46_00740 0.56 +0.2 169,804 + IAI46_00740 0.56 +0.3 169,805 - IAI46_00740 0.56 -0.3 169,869 + IAI46_00740 0.70 -0.1 169,871 + IAI46_00740 0.70 -0.5 169,871 + IAI46_00740 0.70 +0.4 169,872 - IAI46_00740 0.70 +0.5 169,872 - IAI46_00740 0.70 -0.9 169,872 - IAI46_00740 0.70 -0.2 169,872 - IAI46_00740 0.70 -0.2 169,872 - IAI46_00740 0.70 -0.6 169,872 - IAI46_00740 0.70 -0.6 169,930 + IAI46_00740 0.82 +1.1 169,931 - IAI46_00740 0.83 +0.5 169,931 - IAI46_00740 0.83 +1.2 170,017 + +1.4 170,018 - +0.7 170,032 + +0.0 170,045 + -0.1 170,045 + -0.0 170,045 + +0.3 170,045 + -0.0 170,046 - -0.2 170,046 - +0.1 170,048 + +0.4 170,048 + +0.3 170,049 - +1.0 170,049 - +0.1 170,049 - +0.6 170,054 + -0.1 170,054 + +0.2 170,054 + +0.1 170,102 - -0.0 170,111 + -0.6 170,112 - -0.1 170,135 - -0.4 170,198 + +0.1 170,199 - -0.2 170,213 - +0.8 170,229 + +1.0 170,229 + -0.0 170,230 - +1.1 170,230 - -0.0 170,249 + +0.0 170,250 - -1.0 170,250 - -0.7 170,250 - +0.1 170,253 + +0.1 170,253 + -1.3 170,283 + +1.0 170,283 + +0.5 170,283 + +0.3 170,292 + -0.1 170,292 + +0.2 170,292 + +0.8 170,292 + -0.4 170,292 + +0.5 170,292 + +0.4 170,292 + -0.5 170,292 + +0.5 170,292 + +0.5 170,292 + +0.5 170,292 + +0.1 170,293 - +1.4 170,293 - -0.2 170,293 - -1.2 170,293 - +0.1 170,293 - +0.8 170,293 - -1.2 170,293 - -0.5 170,293 - -0.3 170,293 - +0.5 170,314 + -0.1 170,341 + -1.0 170,341 + -0.9 170,342 - -0.1 170,342 - +1.0 170,342 - -0.6 170,342 - -0.7 170,342 - +0.2 170,351 + +0.4 170,352 - -0.4 170,442 + -1.1 170,473 + +0.4
Or see this region's nucleotide sequence