Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4028

Experiment: m.b. nitrite 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 20 mM
4,821,574	+		Echvi_4027	0.48	-0.3
4,821,574	+		Echvi_4027	0.48	-1.4
4,821,574	+		Echvi_4027	0.48	+0.3
4,821,575	-		Echvi_4027	0.48	-0.4
4,821,575	-		Echvi_4027	0.48	-1.1
4,821,575	-		Echvi_4027	0.48	-0.7
4,821,575	-		Echvi_4027	0.48	+0.7
4,821,592	+		Echvi_4027	0.49	-0.1
4,821,702	+		Echvi_4027	0.57	+0.3
4,821,703	-		Echvi_4027	0.58	-0.9
4,821,703	-		Echvi_4027	0.58	-1.0
4,821,703	-		Echvi_4027	0.58	-0.0
4,821,728	-		Echvi_4027	0.59	+0.8
4,821,728	-		Echvi_4027	0.59	+0.4
4,821,801	+		Echvi_4027	0.65	-2.3
4,821,888	+		Echvi_4027	0.71	-0.0
4,821,895	+		Echvi_4027	0.72	-0.6
4,821,957	-		Echvi_4027	0.77	+0.7
4,821,977	-		Echvi_4027	0.78	+0.5
4,822,095	-		Echvi_4027	0.87	+0.4
4,822,095	-		Echvi_4027	0.87	-1.7
4,822,095	-		Echvi_4027	0.87	+0.6
4,822,097	+		Echvi_4027	0.87	-0.4
4,822,098	-		Echvi_4027	0.87	+0.6
4,822,130	+		Echvi_4027	0.89	+1.5
4,822,130	+		Echvi_4027	0.89	-1.7
4,822,130	+		Echvi_4027	0.89	+0.2
4,822,168	-				-0.4
4,822,221	-				-0.7
4,822,231	+				+0.7
4,822,232	-				-0.5
4,822,232	-				-0.2
4,822,232	-				+0.6
4,822,232	-				+0.9
4,822,232	-				+0.2
4,822,275	+				+0.3
4,822,278	+				-0.2
4,822,310	+				+0.1
4,822,310	+				-0.0
4,822,311	-				+0.1
4,822,312	+				-0.7
4,822,313	-				+0.2
4,822,313	-				+0.3
4,822,313	-				-0.9
4,822,313	-				+0.4
4,822,317	-				+0.6
4,822,322	-				-0.5
4,822,361	+				-0.5
4,822,373	+				+0.0
4,822,379	+				+1.4
4,822,380	-				+1.1
4,822,473	-				-1.4
4,822,559	-				+0.0
4,822,560	+				+0.6
4,822,560	+				-0.4
4,822,563	+				+1.2
4,822,563	+				-1.4
4,822,585	+				-0.8
4,822,631	-				+0.3
4,822,631	-				-0.8
4,822,640	-				+0.2
4,822,688	-				-0.7
4,822,693	+				-0.6
4,822,694	-				-0.5
4,822,697	-				-0.1
4,822,697	-				+0.1
4,822,697	-				+0.4
4,822,697	-				-2.9
4,822,848	-		Echvi_4028	0.12	-0.3
4,822,948	+		Echvi_4028	0.16	-1.1
4,822,948	+		Echvi_4028	0.16	-0.2
4,823,003	+		Echvi_4028	0.18	-0.1
4,823,004	-		Echvi_4028	0.19	-0.4
4,823,008	-		Echvi_4028	0.19	-0.5
4,823,062	+		Echvi_4028	0.21	+0.3
4,823,062	+		Echvi_4028	0.21	-1.0
4,823,063	-		Echvi_4028	0.21	+0.8
4,823,063	-		Echvi_4028	0.21	-1.1
4,823,088	+		Echvi_4028	0.22	-0.2
4,823,088	+		Echvi_4028	0.22	+0.8
4,823,089	-		Echvi_4028	0.22	+0.2
4,823,123	+		Echvi_4028	0.24	+0.8
4,823,124	-		Echvi_4028	0.24	+1.5
4,823,132	+		Echvi_4028	0.24	-0.1
4,823,132	+		Echvi_4028	0.24	+0.7
4,823,242	+		Echvi_4028	0.29	+0.8
4,823,273	+		Echvi_4028	0.30	-1.2
4,823,274	-		Echvi_4028	0.30	+0.4
4,823,316	-		Echvi_4028	0.32	+0.1
4,823,327	+		Echvi_4028	0.32	-0.2
4,823,327	+		Echvi_4028	0.32	-0.2
4,823,327	+		Echvi_4028	0.32	-0.1
4,823,328	-		Echvi_4028	0.32	-0.3
4,823,328	-		Echvi_4028	0.32	-0.0
4,823,367	-		Echvi_4028	0.34	+0.6
4,823,395	-		Echvi_4028	0.35	-0.5
4,823,412	+		Echvi_4028	0.36	-1.2
4,823,412	+		Echvi_4028	0.36	-1.3
4,823,413	-		Echvi_4028	0.36	-0.9
4,823,413	-		Echvi_4028	0.36	-1.9
4,823,462	+		Echvi_4028	0.38	-1.6
4,823,463	-		Echvi_4028	0.38	-1.2
4,823,463	-		Echvi_4028	0.38	-0.5
4,823,485	+		Echvi_4028	0.39	+0.2
4,823,486	-		Echvi_4028	0.39	-1.9
4,823,509	+		Echvi_4028	0.40	+0.5
4,823,510	-		Echvi_4028	0.40	+0.5
4,823,579	+		Echvi_4028	0.43	-1.1
4,823,580	-		Echvi_4028	0.43	+0.3
4,823,609	+		Echvi_4028	0.44	-0.4
4,823,609	+		Echvi_4028	0.44	-2.4
4,823,631	+		Echvi_4028	0.45	+1.0
4,823,632	-		Echvi_4028	0.45	+0.1
4,823,641	-		Echvi_4028	0.45	-1.2
4,823,645	+		Echvi_4028	0.46	-0.0
4,823,646	-		Echvi_4028	0.46	-0.8
4,823,646	-		Echvi_4028	0.46	+0.7
4,823,646	-		Echvi_4028	0.46	-0.5
4,823,673	+		Echvi_4028	0.47	-1.5
4,823,673	+		Echvi_4028	0.47	-0.4
4,823,707	-		Echvi_4028	0.48	+0.1
4,823,709	+		Echvi_4028	0.48	-0.5
4,823,709	+		Echvi_4028	0.48	-0.3
4,823,710	-		Echvi_4028	0.48	-0.0
4,823,710	-		Echvi_4028	0.48	-0.5
4,823,710	-		Echvi_4028	0.48	-0.1
4,823,745	-		Echvi_4028	0.50	+0.3
4,823,786	-		Echvi_4028	0.52	-0.5
4,823,786	-		Echvi_4028	0.52	+0.0
4,823,873	-		Echvi_4028	0.55	-0.3
4,823,922	-		Echvi_4028	0.57	-0.8
4,823,943	+		Echvi_4028	0.58	-1.0
4,824,000	-		Echvi_4028	0.61	+1.5
4,824,000	-		Echvi_4028	0.61	+0.0
4,824,053	-		Echvi_4028	0.63	+0.6
4,824,053	-		Echvi_4028	0.63	+1.4
4,824,065	-		Echvi_4028	0.63	-0.9
4,824,084	-		Echvi_4028	0.64	-0.7
4,824,126	+		Echvi_4028	0.66	-0.1
4,824,126	+		Echvi_4028	0.66	+2.3
4,824,126	+		Echvi_4028	0.66	-0.8
4,824,127	-		Echvi_4028	0.66	-0.3
4,824,246	+		Echvi_4028	0.71	-0.2
4,824,246	+		Echvi_4028	0.71	-2.9
4,824,246	+		Echvi_4028	0.71	-0.8
4,824,247	-		Echvi_4028	0.71	+0.8
4,824,247	-		Echvi_4028	0.71	-1.1
4,824,247	-		Echvi_4028	0.71	-0.9
4,824,247	-		Echvi_4028	0.71	-0.1
4,824,251	+		Echvi_4028	0.71	-0.8
4,824,251	+		Echvi_4028	0.71	-1.7
4,824,252	-		Echvi_4028	0.71	+1.5
4,824,252	-		Echvi_4028	0.71	+0.4
4,824,315	+		Echvi_4028	0.74	-0.3
4,824,315	+		Echvi_4028	0.74	-0.1
4,824,316	-		Echvi_4028	0.74	-2.4
4,824,316	-		Echvi_4028	0.74	-1.7
4,824,316	-		Echvi_4028	0.74	+1.3
4,824,316	-		Echvi_4028	0.74	+0.4
4,824,339	-		Echvi_4028	0.75	+0.4
4,824,383	-		Echvi_4028	0.77	-1.1
4,824,415	+		Echvi_4028	0.78	+0.5
4,824,415	+		Echvi_4028	0.78	+0.9
4,824,499	-		Echvi_4028	0.82	-1.3
4,824,598	-		Echvi_4028	0.86	-0.2
4,824,683	-		Echvi_4028	0.90	-0.6
4,824,702	-				+0.2
4,824,753	+				-0.0
4,824,770	-				-0.2
4,824,803	-				-0.7
4,824,815	-				+0.2
4,824,865	-				+0.1
4,824,866	+				-0.4
4,824,932	+				-0.0
4,824,933	-				+0.3
4,825,040	+		Echvi_4029	0.12	+0.8
4,825,148	+		Echvi_4029	0.34	+0.1
4,825,152	+		Echvi_4029	0.34	+0.1
4,825,219	-		Echvi_4029	0.48	+0.8
4,825,324	+		Echvi_4029	0.69	-0.1
4,825,333	+		Echvi_4029	0.71	+0.1
4,825,343	+		Echvi_4029	0.73	+2.4
4,825,419	+		Echvi_4029	0.88	+0.5
4,825,593	+				+0.3
4,825,831	-		Echvi_4030	0.24	-0.3