Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3156

Experiment: m.b. nitrite 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 20 mM
3,760,993	+		Echvi_3154	0.30	-0.4
3,760,994	-		Echvi_3154	0.30	+0.3
3,760,994	-		Echvi_3154	0.30	-0.4
3,761,031	+		Echvi_3154	0.35	-0.1
3,761,031	+		Echvi_3154	0.35	-2.5
3,761,032	-		Echvi_3154	0.36	-0.8
3,761,038	+		Echvi_3154	0.36	+0.1
3,761,058	-		Echvi_3154	0.39	-0.3
3,761,058	-		Echvi_3154	0.39	+1.4
3,761,059	+		Echvi_3154	0.39	-0.3
3,761,059	+		Echvi_3154	0.39	-0.4
3,761,059	+		Echvi_3154	0.39	+0.3
3,761,060	-		Echvi_3154	0.40	+0.3
3,761,060	-		Echvi_3154	0.40	-2.6
3,761,060	-		Echvi_3154	0.40	+0.1
3,761,060	-		Echvi_3154	0.40	+1.3
3,761,060	-		Echvi_3154	0.40	+1.2
3,761,060	-		Echvi_3154	0.40	-2.0
3,761,060	-				+1.4
3,761,063	+		Echvi_3154	0.40	+0.2
3,761,064	-		Echvi_3154	0.40	-0.0
3,761,096	+		Echvi_3154	0.45	-0.1
3,761,105	+		Echvi_3154	0.46	+0.0
3,761,106	-		Echvi_3154	0.46	+0.1
3,761,109	+		Echvi_3154	0.46	-0.3
3,761,109	+		Echvi_3154	0.46	+0.5
3,761,113	+		Echvi_3154	0.47	-1.0
3,761,134	+		Echvi_3154	0.50	-1.0
3,761,148	-		Echvi_3154	0.52	-1.3
3,761,175	+		Echvi_3154	0.56	-2.3
3,761,175	+		Echvi_3154	0.56	-0.1
3,761,176	-		Echvi_3154	0.56	-2.0
3,761,176	-		Echvi_3154	0.56	-0.9
3,761,176	-		Echvi_3154	0.56	-0.3
3,761,176	-		Echvi_3154	0.56	+0.1
3,761,221	-		Echvi_3154	0.62	-0.8
3,761,270	+		Echvi_3154	0.69	-0.4
3,761,290	-		Echvi_3154	0.72	-1.1
3,761,322	+		Echvi_3154	0.76	-0.6
3,761,322	+		Echvi_3154	0.76	+1.8
3,761,323	-		Echvi_3154	0.77	+0.3
3,761,418	+		Echvi_3154	0.90	-1.7
3,761,419	-				+0.4
3,761,419	-				+0.2
3,761,419	-				-0.5
3,761,419	-				+0.5
3,761,431	+				-0.7
3,761,434	-				+0.6
3,761,446	-				-0.9
3,761,488	-				+0.1
3,761,488	-				+0.4
3,761,488	-				+1.4
3,761,502	-				+1.7
3,761,502	-				-0.0
3,761,522	-				+1.3
3,761,586	-		Echvi_3155	0.18	-0.3
3,761,601	-		Echvi_3155	0.21	-0.5
3,761,602	+		Echvi_3155	0.22	-1.5
3,761,645	+		Echvi_3155	0.31	-0.0
3,761,646	-		Echvi_3155	0.31	-1.9
3,761,648	+		Echvi_3155	0.32	-2.5
3,761,648	+		Echvi_3155	0.32	+1.6
3,761,649	-		Echvi_3155	0.32	+0.3
3,761,671	-		Echvi_3155	0.37	-1.2
3,761,684	+		Echvi_3155	0.39	+0.6
3,761,690	+		Echvi_3155	0.41	-0.1
3,761,690	+		Echvi_3155	0.41	-3.1
3,761,691	-		Echvi_3155	0.41	-0.7
3,761,691	-		Echvi_3155	0.41	+0.5
3,761,691	-		Echvi_3155	0.41	-0.0
3,761,762	+		Echvi_3155	0.56	-1.7
3,761,767	+		Echvi_3155	0.57	-0.1
3,761,783	+		Echvi_3155	0.61	-3.0
3,761,783	+		Echvi_3155	0.61	+1.2
3,761,784	-		Echvi_3155	0.61	-0.1
3,761,805	-		Echvi_3155	0.66	-0.3
3,761,805	-		Echvi_3155	0.66	-1.8
3,761,805	-		Echvi_3155	0.66	+0.7
3,761,845	+		Echvi_3155	0.74	-1.6
3,761,846	-		Echvi_3155	0.74	+0.2
3,761,849	-		Echvi_3155	0.75	+0.6
3,761,882	-		Echvi_3155	0.82	-0.5
3,761,885	-		Echvi_3155	0.83	-0.4
3,761,905	-		Echvi_3155	0.87	-0.9
3,761,949	-				+0.1
3,761,980	+				+0.0
3,761,980	+				-0.5
3,761,981	-				+0.5
3,761,986	+				+1.9
3,761,986	+				-0.1
3,761,987	-				-0.7
3,761,987	-				+1.0
3,761,987	-				-0.4
3,761,987	-				-0.2
3,761,987	-				+0.2
3,761,987	-				-0.4
3,761,987	-				+0.8
3,761,992	-				+0.6
3,762,043	-				-0.2
3,762,043	-				-0.2
3,762,140	-		Echvi_3156	0.13	-0.1
3,762,165	+		Echvi_3156	0.15	-1.8
3,762,168	-		Echvi_3156	0.15	-0.4
3,762,199	+		Echvi_3156	0.18	-1.0
3,762,200	-		Echvi_3156	0.18	-0.1
3,762,205	-		Echvi_3156	0.18	+0.4
3,762,205	-		Echvi_3156	0.18	-1.1
3,762,205	-		Echvi_3156	0.18	-0.4
3,762,205	-		Echvi_3156	0.18	-0.2
3,762,293	-		Echvi_3156	0.25	-0.0
3,762,295	+		Echvi_3156	0.25	-1.0
3,762,295	+		Echvi_3156	0.25	-1.2
3,762,296	-		Echvi_3156	0.25	-0.9
3,762,296	-		Echvi_3156	0.25	-0.5
3,762,296	-		Echvi_3156	0.25	+0.3
3,762,296	-		Echvi_3156	0.25	+0.3
3,762,297	+		Echvi_3156	0.25	-1.8
3,762,297	+		Echvi_3156	0.25	-0.2
3,762,298	-		Echvi_3156	0.25	-0.1
3,762,298	-		Echvi_3156	0.25	+2.2
3,762,298	-		Echvi_3156	0.25	+1.4
3,762,298	-		Echvi_3156	0.25	+0.1
3,762,308	-		Echvi_3156	0.26	-0.2
3,762,329	+		Echvi_3156	0.27	+0.3
3,762,329	+		Echvi_3156	0.27	+0.1
3,762,330	-		Echvi_3156	0.27	-0.4
3,762,330	-		Echvi_3156	0.27	-0.6
3,762,334	-		Echvi_3156	0.28	+0.1
3,762,437	-		Echvi_3156	0.35	+0.4
3,762,437	-		Echvi_3156	0.35	+0.0
3,762,437	-		Echvi_3156	0.35	+0.0
3,762,437	-		Echvi_3156	0.35	+0.7
3,762,437	-		Echvi_3156	0.35	+0.1
3,762,437	-		Echvi_3156	0.35	-0.1
3,762,467	-		Echvi_3156	0.37	-0.4
3,762,467	-		Echvi_3156	0.37	-0.4
3,762,467	-		Echvi_3156	0.37	+0.1
3,762,469	+		Echvi_3156	0.38	-0.1
3,762,469	+		Echvi_3156	0.38	-1.9
3,762,510	+		Echvi_3156	0.41	+0.6
3,762,514	-		Echvi_3156	0.41	-0.0
3,762,514	-		Echvi_3156	0.41	-0.7
3,762,516	+		Echvi_3156	0.41	+0.6
3,762,516	+		Echvi_3156	0.41	-1.2
3,762,517	-		Echvi_3156	0.41	-1.9
3,762,517	-		Echvi_3156	0.41	-0.6
3,762,517	-		Echvi_3156	0.41	-0.5
3,762,573	-		Echvi_3156	0.45	+0.1
3,762,573	-		Echvi_3156	0.45	-0.1
3,762,620	-		Echvi_3156	0.49	-0.9
3,762,628	-		Echvi_3156	0.49	+1.3
3,762,693	-		Echvi_3156	0.54	+0.6
3,762,712	-		Echvi_3156	0.55	+1.4
3,762,723	+		Echvi_3156	0.56	+0.3
3,762,724	-		Echvi_3156	0.56	-1.0
3,762,735	+		Echvi_3156	0.57	-1.8
3,762,735	+		Echvi_3156	0.57	-1.0
3,762,744	-		Echvi_3156	0.58	-0.6
3,762,768	+		Echvi_3156	0.60	+0.6
3,762,768	+		Echvi_3156	0.60	+0.8
3,762,769	-		Echvi_3156	0.60	+0.2
3,762,775	+		Echvi_3156	0.60	-1.2
3,762,856	-		Echvi_3156	0.66	-0.0
3,762,856	-		Echvi_3156	0.66	-0.1
3,763,016	-		Echvi_3156	0.78	+0.0
3,763,039	+		Echvi_3156	0.80	-1.9
3,763,040	-		Echvi_3156	0.80	-0.2
3,763,040	-		Echvi_3156	0.80	+0.9
3,763,186	-				+0.7
3,763,186	-				+0.8
3,763,196	-				+0.4
3,763,202	-				+0.1
3,763,245	-				+0.5
3,763,355	+				-0.7
3,763,355	+				+0.3
3,763,435	-				-0.0
3,763,467	-		Echvi_3157	0.13	+0.1
3,763,477	+		Echvi_3157	0.14	-1.9
3,763,478	-		Echvi_3157	0.14	+0.1
3,763,478	-		Echvi_3157	0.14	+1.3
3,763,478	-		Echvi_3157	0.14	+0.3
3,763,486	+		Echvi_3157	0.15	-1.2
3,763,487	-		Echvi_3157	0.15	-1.1
3,763,487	-		Echvi_3157	0.15	-1.2
3,763,516	-		Echvi_3157	0.18	+0.1
3,763,551	-		Echvi_3157	0.21	+0.2
3,763,591	-		Echvi_3157	0.25	+1.6
3,763,591	-		Echvi_3157	0.25	-0.1
3,763,591	-		Echvi_3157	0.25	-0.6
3,763,627	+		Echvi_3157	0.29	+1.1
3,763,628	-		Echvi_3157	0.29	+0.7
3,763,628	-		Echvi_3157	0.29	+0.7
3,763,656	-		Echvi_3157	0.32	+0.1
3,763,755	+		Echvi_3157	0.41	+1.4
3,763,758	+		Echvi_3157	0.42	-1.3
3,763,758	+		Echvi_3157	0.42	+0.4
3,763,759	-		Echvi_3157	0.42	-1.2
3,763,759	-		Echvi_3157	0.42	-0.5
3,763,761	+		Echvi_3157	0.42	+1.3
3,763,761	+		Echvi_3157	0.42	-1.7
3,763,762	-		Echvi_3157	0.42	-0.9
3,763,762	-		Echvi_3157	0.42	+0.9
3,763,762	-		Echvi_3157	0.42	+0.1
3,763,791	-		Echvi_3157	0.45	+1.4
3,763,824	+		Echvi_3157	0.48	+0.3
3,763,833	-		Echvi_3157	0.49	-0.2
3,763,842	+		Echvi_3157	0.50	-3.6
3,763,843	-		Echvi_3157	0.50	+0.1
3,763,866	-		Echvi_3157	0.52	-1.3
3,763,866	-		Echvi_3157	0.52	-0.4
3,763,872	+		Echvi_3157	0.53	+1.7
3,763,875	+		Echvi_3157	0.53	-1.1
3,763,876	-		Echvi_3157	0.53	+1.4
3,763,881	+		Echvi_3157	0.54	+0.1
3,763,996	-		Echvi_3157	0.65	-0.5
3,764,046	-		Echvi_3157	0.70	-1.0
3,764,074	-		Echvi_3157	0.73	-1.3
3,764,089	+		Echvi_3157	0.74	-0.3
3,764,138	-		Echvi_3157	0.79	+1.0
3,764,160	+		Echvi_3157	0.81	-1.6
3,764,160	+		Echvi_3157	0.81	-0.1
3,764,161	-		Echvi_3157	0.81	-1.5
3,764,161	-		Echvi_3157	0.81	-0.2
3,764,161	-		Echvi_3157	0.81	-0.1
3,764,164	+		Echvi_3157	0.82	-0.4
3,764,164	+		Echvi_3157	0.82	+1.3
3,764,164	+		Echvi_3157	0.82	-0.1
3,764,164	+		Echvi_3157	0.82	-0.4
3,764,165	-		Echvi_3157	0.82	+0.6
3,764,165	-		Echvi_3157	0.82	-2.2
3,764,188	-		Echvi_3157	0.84	+1.0
3,764,188	-		Echvi_3157	0.84	+0.2
3,764,224	+		Echvi_3157	0.88	+0.1
3,764,224	+		Echvi_3157	0.88	-2.3
3,764,225	-		Echvi_3157	0.88	+0.6
3,764,225	-		Echvi_3157	0.88	-0.7
3,764,225	-		Echvi_3157	0.88	+0.3
3,764,225	-		Echvi_3157	0.88	-1.5
3,764,229	-		Echvi_3157	0.88	+1.1
3,764,244	+		Echvi_3157	0.90	-1.8
3,764,244	+		Echvi_3157	0.90	-1.7
3,764,245	-		Echvi_3157	0.90	+0.2
3,764,250	+				-1.6
3,764,265	-				+0.3
3,764,265	-				-0.5
3,764,272	-				+1.7