Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2825

Experiment: m.b. nitrite 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 20 mM
3,380,382	-		Echvi_2824	0.31	-2.7
3,380,386	+		Echvi_2824	0.31	-1.6
3,380,386	+		Echvi_2824	0.31	-1.0
3,380,386	+		Echvi_2824	0.31	-0.2
3,380,387	-		Echvi_2824	0.31	-2.8
3,380,409	+		Echvi_2824	0.33	-0.6
3,380,409	+		Echvi_2824	0.33	-3.0
3,380,410	-		Echvi_2824	0.33	-1.0
3,380,500	+		Echvi_2824	0.41	-1.2
3,380,500	+		Echvi_2824	0.41	-1.6
3,380,500	+		Echvi_2824	0.41	-2.2
3,380,500	+		Echvi_2824	0.41	-1.7
3,380,500	+		Echvi_2824	0.41	-1.1
3,380,501	-		Echvi_2824	0.41	+0.7
3,380,501	-		Echvi_2824	0.41	-1.4
3,380,522	+		Echvi_2824	0.43	-1.9
3,380,522	+		Echvi_2824	0.43	-1.2
3,380,523	-		Echvi_2824	0.43	-1.5
3,380,523	-		Echvi_2824	0.43	-2.1
3,380,523	-		Echvi_2824	0.43	-0.8
3,380,524	+		Echvi_2824	0.43	-0.8
3,380,525	-		Echvi_2824	0.43	-0.6
3,380,525	-		Echvi_2824	0.43	-1.6
3,380,543	+		Echvi_2824	0.44	-1.9
3,380,544	-		Echvi_2824	0.44	-2.8
3,380,553	-		Echvi_2824	0.45	-1.9
3,380,620	-		Echvi_2824	0.51	-2.4
3,380,631	+		Echvi_2824	0.51	-2.1
3,380,631	+		Echvi_2824	0.51	-2.8
3,380,737	-		Echvi_2824	0.60	-0.6
3,380,749	+		Echvi_2824	0.61	-1.5
3,380,780	+		Echvi_2824	0.64	+0.2
3,380,792	+		Echvi_2824	0.65	-2.8
3,380,834	+		Echvi_2824	0.68	-1.5
3,380,835	-		Echvi_2824	0.68	-3.0
3,380,850	+		Echvi_2824	0.69	-0.4
3,380,882	+		Echvi_2824	0.72	-1.9
3,380,882	+		Echvi_2824	0.72	-0.2
3,380,882	+		Echvi_2824	0.72	-2.4
3,380,882	+		Echvi_2824	0.72	-1.0
3,380,882	+		Echvi_2824	0.72	-1.1
3,380,884	+		Echvi_2824	0.72	-1.6
3,380,885	-		Echvi_2824	0.72	-2.0
3,380,901	+		Echvi_2824	0.74	-0.4
3,380,902	-		Echvi_2824	0.74	-1.8
3,380,942	-		Echvi_2824	0.77	-2.0
3,381,180	+				-1.3
3,381,180	+				-3.0
3,381,189	-				-1.4
3,381,202	+				-3.1
3,381,226	+				-0.6
3,381,227	-				+0.3
3,381,227	-				+0.4
3,381,227	-				+0.7
3,381,227	-				-0.1
3,381,230	+				-1.1
3,381,292	+				-0.3
3,381,292	+				-0.1
3,381,292	+				-1.6
3,381,293	-				-0.3
3,381,293	-				+0.7
3,381,294	+				+0.3
3,381,294	+				-0.0
3,381,394	-				-0.8
3,381,416	-				+0.4
3,381,437	+				-0.3
3,381,464	+				+0.5
3,381,505	+				-0.1
3,381,523	+				-0.5
3,381,596	+		Echvi_2825	0.12	-1.0
3,381,596	+		Echvi_2825	0.12	+0.0
3,381,649	+		Echvi_2825	0.13	+1.0
3,381,650	-		Echvi_2825	0.13	+0.9
3,381,650	-		Echvi_2825	0.13	-1.3
3,381,650	-		Echvi_2825	0.13	-0.3
3,381,660	+		Echvi_2825	0.13	-0.9
3,381,660	+		Echvi_2825	0.13	-0.8
3,381,665	-		Echvi_2825	0.14	-1.4
3,381,665	-		Echvi_2825	0.14	-0.2
3,381,684	+		Echvi_2825	0.14	-0.7
3,381,684	+		Echvi_2825	0.14	-1.4
3,381,684	+		Echvi_2825	0.14	-0.4
3,381,685	-		Echvi_2825	0.14	+0.6
3,381,685	-		Echvi_2825	0.14	+0.3
3,381,695	+		Echvi_2825	0.15	-0.5
3,381,696	-		Echvi_2825	0.15	+1.0
3,381,700	+		Echvi_2825	0.15	+0.3
3,381,802	+		Echvi_2825	0.18	-0.6
3,381,920	+		Echvi_2825	0.21	+0.5
3,381,935	-		Echvi_2825	0.22	+1.9
3,381,962	+		Echvi_2825	0.23	-3.0
3,381,963	-		Echvi_2825	0.23	+0.2
3,381,963	-		Echvi_2825	0.23	-0.8
3,381,964	+		Echvi_2825	0.23	-1.1
3,381,964	+		Echvi_2825	0.23	-1.1
3,381,965	-		Echvi_2825	0.23	+0.5
3,381,965	-		Echvi_2825	0.23	-0.8
3,382,133	+		Echvi_2825	0.28	-0.2
3,382,168	+		Echvi_2825	0.29	-0.9
3,382,239	-		Echvi_2825	0.31	-1.4
3,382,338	+		Echvi_2825	0.34	-1.0
3,382,338	+		Echvi_2825	0.34	+0.5
3,382,338	+		Echvi_2825	0.34	-0.8
3,382,339	-		Echvi_2825	0.34	-0.7
3,382,339	-		Echvi_2825	0.34	+0.5
3,382,339	-		Echvi_2825	0.34	-0.9
3,382,339	-		Echvi_2825	0.34	+0.9
3,382,339	-		Echvi_2825	0.34	+0.1
3,382,339	-		Echvi_2825	0.34	+0.3
3,382,339	-		Echvi_2825	0.34	+1.8
3,382,339	-		Echvi_2825	0.34	+0.6
3,382,349	+		Echvi_2825	0.34	-1.4
3,382,350	-		Echvi_2825	0.34	-1.0
3,382,378	+		Echvi_2825	0.35	-0.6
3,382,453	+		Echvi_2825	0.38	-1.1
3,382,463	-		Echvi_2825	0.38	+0.2
3,382,483	+		Echvi_2825	0.39	-1.2
3,382,545	+		Echvi_2825	0.40	-0.2
3,382,545	+		Echvi_2825	0.40	+0.6
3,382,545	+		Echvi_2825	0.40	+0.7
3,382,577	-		Echvi_2825	0.41	-1.7
3,382,577	-		Echvi_2825	0.41	-0.8
3,382,622	+		Echvi_2825	0.43	-0.6
3,382,623	-		Echvi_2825	0.43	-0.5
3,382,631	+		Echvi_2825	0.43	+0.6
3,382,679	+		Echvi_2825	0.44	-1.0
3,382,679	+		Echvi_2825	0.44	+0.2
3,382,680	-		Echvi_2825	0.45	-0.9
3,382,680	-		Echvi_2825	0.45	-0.1
3,382,680	-		Echvi_2825	0.45	+1.1
3,382,683	+		Echvi_2825	0.45	-1.1
3,382,683	+		Echvi_2825	0.45	-0.2
3,382,684	-		Echvi_2825	0.45	-0.8
3,382,684	-		Echvi_2825	0.45	+1.0
3,382,684	-		Echvi_2825	0.45	+0.1
3,382,684	-		Echvi_2825	0.45	+0.9
3,382,767	-		Echvi_2825	0.47	-0.5
3,382,789	-		Echvi_2825	0.48	-1.7
3,382,789	-		Echvi_2825	0.48	-0.2
3,382,806	+		Echvi_2825	0.48	+0.5
3,382,806	+		Echvi_2825	0.48	-0.1
3,382,870	-		Echvi_2825	0.50	+0.4
3,382,916	+		Echvi_2825	0.52	-0.5
3,382,917	-		Echvi_2825	0.52	-0.2
3,383,077	-		Echvi_2825	0.57	-0.5
3,383,077	-		Echvi_2825	0.57	-0.7
3,383,127	+		Echvi_2825	0.58	-1.5
3,383,127	+		Echvi_2825	0.58	-0.2
3,383,128	-		Echvi_2825	0.58	+0.9
3,383,161	+		Echvi_2825	0.59	-1.2
3,383,162	-		Echvi_2825	0.59	+0.3
3,383,167	+		Echvi_2825	0.59	-0.5
3,383,168	-		Echvi_2825	0.59	-0.2
3,383,168	-		Echvi_2825	0.59	-0.6
3,383,168	-		Echvi_2825	0.59	-0.1
3,383,170	-		Echvi_2825	0.59	+0.1
3,383,198	+		Echvi_2825	0.60	-0.3
3,383,198	+		Echvi_2825	0.60	+1.1
3,383,198	+		Echvi_2825	0.60	+0.5
3,383,199	-		Echvi_2825	0.60	-1.1
3,383,257	+		Echvi_2825	0.62	-0.7
3,383,275	-		Echvi_2825	0.63	+0.1
3,383,278	+		Echvi_2825	0.63	-1.0
3,383,280	+		Echvi_2825	0.63	-0.2
3,383,281	-		Echvi_2825	0.63	+0.0
3,383,281	-		Echvi_2825	0.63	+0.0
3,383,281	-		Echvi_2825	0.63	-1.1
3,383,281	-		Echvi_2825	0.63	-2.3
3,383,289	+		Echvi_2825	0.63	-0.2
3,383,290	-		Echvi_2825	0.63	-0.6
3,383,291	+		Echvi_2825	0.63	+0.9
3,383,291	+		Echvi_2825	0.63	-1.3
3,383,317	+		Echvi_2825	0.64	+0.3
3,383,317	+		Echvi_2825	0.64	+0.5
3,383,321	+		Echvi_2825	0.64	-0.5
3,383,321	+		Echvi_2825	0.64	-1.5
3,383,322	-		Echvi_2825	0.64	+0.1
3,383,354	-		Echvi_2825	0.65	-0.7
3,383,354	-		Echvi_2825	0.65	+1.2
3,383,430	-		Echvi_2825	0.67	-0.6
3,383,521	+		Echvi_2825	0.70	-0.3
3,383,522	-		Echvi_2825	0.70	+0.1
3,383,522	-		Echvi_2825	0.70	+0.8
3,383,618	-		Echvi_2825	0.73	-1.1
3,383,619	+		Echvi_2825	0.73	-0.7
3,383,619	+		Echvi_2825	0.73	-0.0
3,383,619	+		Echvi_2825	0.73	+0.2
3,383,620	-		Echvi_2825	0.73	+0.1
3,383,620	-		Echvi_2825	0.73	-1.1
3,383,645	+		Echvi_2825	0.74	-1.1
3,383,646	-		Echvi_2825	0.74	+1.0
3,383,756	-		Echvi_2825	0.77	-0.4
3,383,765	+		Echvi_2825	0.78	+0.6
3,383,765	+		Echvi_2825	0.78	+1.0
3,383,902	-		Echvi_2825	0.82	+0.3
3,383,905	-		Echvi_2825	0.82	-0.2
3,383,942	-		Echvi_2825	0.83	+0.3
3,383,942	-		Echvi_2825	0.83	+0.0
3,384,023	-		Echvi_2825	0.85	+1.5
3,384,023	-		Echvi_2825	0.85	+0.2
3,384,031	-		Echvi_2825	0.86	+0.2
3,384,031	-		Echvi_2825	0.86	-0.2
3,384,118	+		Echvi_2825	0.88	-1.4
3,384,138	+		Echvi_2825	0.89	-0.4
3,384,138	+		Echvi_2825	0.89	+0.7
3,384,139	-		Echvi_2825	0.89	+0.3
3,384,141	+		Echvi_2825	0.89	+0.5
3,384,141	+		Echvi_2825	0.89	-1.3
3,384,142	-		Echvi_2825	0.89	-0.4
3,384,149	-		Echvi_2825	0.89	+0.1
3,384,297	-				-0.6
3,384,315	+				-1.1
3,384,316	-				-0.2
3,384,348	-				+0.2
3,384,412	-				-0.3
3,384,465	-				+0.2
3,385,275	+		Echvi_2827	0.13	+0.4
3,385,362	-		Echvi_2827	0.27	-0.3
3,385,362	-		Echvi_2827	0.27	+0.5
3,385,420	-		Echvi_2827	0.35	-0.0
3,385,501	-		Echvi_2827	0.48	+0.6