Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2589

Experiment: m.b. nitrite 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 20 mM
3,069,061	+		Echvi_2588	0.53	-1.0
3,069,062	-		Echvi_2588	0.53	-0.2
3,069,062	-		Echvi_2588	0.53	+0.2
3,069,062	-		Echvi_2588	0.53	-0.6
3,069,062	-		Echvi_2588	0.53	-0.6
3,069,078	+		Echvi_2588	0.54	-0.4
3,069,079	-		Echvi_2588	0.54	-0.1
3,069,079	-		Echvi_2588	0.54	-1.0
3,069,079	-		Echvi_2588	0.54	-0.0
3,069,079	-		Echvi_2588	0.54	-1.3
3,069,082	-		Echvi_2588	0.54	+0.2
3,069,104	-		Echvi_2588	0.56	-0.4
3,069,179	-		Echvi_2588	0.60	-0.5
3,069,180	+		Echvi_2588	0.60	+1.1
3,069,181	-		Echvi_2588	0.60	+0.2
3,069,227	-		Echvi_2588	0.63	-2.3
3,069,241	-		Echvi_2588	0.63	-0.5
3,069,268	-		Echvi_2588	0.65	-0.2
3,069,268	-		Echvi_2588	0.65	+0.0
3,069,279	+		Echvi_2588	0.66	-0.6
3,069,292	+		Echvi_2588	0.66	-0.0
3,069,293	-		Echvi_2588	0.66	+0.3
3,069,293	-		Echvi_2588	0.66	+1.0
3,069,294	+		Echvi_2588	0.66	+2.6
3,069,294	+		Echvi_2588	0.66	+2.6
3,069,329	+		Echvi_2588	0.68	+1.2
3,069,338	-		Echvi_2588	0.69	-0.7
3,069,338	-		Echvi_2588	0.69	-1.0
3,069,433	-		Echvi_2588	0.74	+0.1
3,069,455	-		Echvi_2588	0.76	-0.5
3,069,531	-		Echvi_2588	0.80	+0.1
3,069,535	+		Echvi_2588	0.80	+0.1
3,069,535	+		Echvi_2588	0.80	-0.0
3,069,536	-		Echvi_2588	0.80	+0.2
3,069,536	-		Echvi_2588	0.80	+0.2
3,069,536	-		Echvi_2588	0.80	-1.5
3,069,610	+		Echvi_2588	0.84	-0.7
3,069,624	-		Echvi_2588	0.85	-1.4
3,069,707	+				-1.5
3,069,713	-				-1.5
3,069,713	-				+0.1
3,069,729	+				-1.6
3,069,765	+				-0.7
3,069,823	-				+1.0
3,069,893	+				-0.6
3,069,917	-				+0.2
3,069,952	+				-0.2
3,069,953	-				-0.3
3,069,956	+				-0.4
3,069,958	+				+0.5
3,069,959	-				-0.6
3,069,959	-				+0.7
3,069,959	-				-0.5
3,069,962	+				-0.9
3,069,968	-				+0.8
3,069,983	-				+1.1
3,069,996	-				-1.9
3,069,996	-				+0.6
3,069,996	-				+0.6
3,070,003	-				+0.2
3,070,021	-				-0.6
3,070,054	+				-0.5
3,070,077	+				+0.4
3,070,132	+				-3.3
3,070,133	-				+0.1
3,070,133	-				-1.7
3,070,263	-		Echvi_2589	0.21	-1.8
3,070,263	-		Echvi_2589	0.21	-1.3
3,070,263	-		Echvi_2589	0.21	-0.5
3,070,363	+		Echvi_2589	0.29	+0.2
3,070,364	-		Echvi_2589	0.30	+1.1
3,070,406	+		Echvi_2589	0.33	-1.0
3,070,407	-		Echvi_2589	0.33	-0.6
3,070,407	-		Echvi_2589	0.33	+0.2
3,070,407	-		Echvi_2589	0.33	-1.0
3,070,408	+		Echvi_2589	0.33	+1.0
3,070,408	+		Echvi_2589	0.33	+1.4
3,070,511	+		Echvi_2589	0.42	+0.3
3,070,528	+		Echvi_2589	0.44	-1.0
3,070,609	-		Echvi_2589	0.51	-1.1
3,070,632	-		Echvi_2589	0.53	-1.4
3,070,632	-		Echvi_2589	0.53	-0.3
3,070,636	+		Echvi_2589	0.53	-0.6
3,070,636	+		Echvi_2589	0.53	-0.5
3,070,640	-		Echvi_2589	0.54	+0.6
3,070,709	+		Echvi_2589	0.60	+1.2
3,070,710	-		Echvi_2589	0.60	+0.1
3,070,719	-		Echvi_2589	0.61	-0.2
3,070,719	-		Echvi_2589	0.61	+1.1
3,070,724	+		Echvi_2589	0.61	+0.5
3,070,738	+		Echvi_2589	0.62	-0.2
3,070,780	-		Echvi_2589	0.66	-0.3
3,070,804	+		Echvi_2589	0.68	-0.3
3,070,805	-		Echvi_2589	0.68	-1.5
3,070,805	-		Echvi_2589	0.68	+1.6
3,070,805	-		Echvi_2589	0.68	+0.2
3,070,814	+		Echvi_2589	0.69	-0.3
3,070,814	+		Echvi_2589	0.69	-1.4
3,070,815	-		Echvi_2589	0.69	-1.0
3,070,826	+		Echvi_2589	0.70	+0.5
3,070,826	+		Echvi_2589	0.70	-0.6
3,070,826	+		Echvi_2589	0.70	+0.8
3,070,826	+		Echvi_2589	0.70	+0.4
3,070,827	-		Echvi_2589	0.70	-1.0
3,070,827	-		Echvi_2589	0.70	-0.1
3,070,827	-		Echvi_2589	0.70	-1.9
3,070,827	-		Echvi_2589	0.70	+0.0
3,070,827	-		Echvi_2589	0.70	-0.3
3,070,827	-		Echvi_2589	0.70	-0.6
3,070,828	+		Echvi_2589	0.70	-0.1
3,070,828	+		Echvi_2589	0.70	-0.7
3,070,828	+		Echvi_2589	0.70	+0.0
3,070,828	+		Echvi_2589	0.70	-1.4
3,070,829	-		Echvi_2589	0.70	+0.3
3,070,829	-		Echvi_2589	0.70	-1.3
3,070,883	-		Echvi_2589	0.75	-0.5
3,070,883	-		Echvi_2589	0.75	+0.1
3,070,888	+		Echvi_2589	0.76	+1.4
3,070,891	+		Echvi_2589	0.76	-0.3
3,070,892	-		Echvi_2589	0.76	-0.9
3,070,940	-		Echvi_2589	0.80	-0.4
3,070,946	+		Echvi_2589	0.81	-0.0
3,070,948	+		Echvi_2589	0.81	-0.4
3,070,948	+		Echvi_2589	0.81	-1.4
3,070,949	-		Echvi_2589	0.81	-1.6
3,070,962	+		Echvi_2589	0.82	-1.1
3,070,963	-		Echvi_2589	0.82	-0.3
3,070,963	-		Echvi_2589	0.82	-0.3
3,070,969	-		Echvi_2589	0.83	-1.0
3,071,140	+				-0.1
3,071,140	+				-0.8
3,071,140	+				+0.4
3,071,154	+				-3.2
3,071,174	-				+0.9
3,071,210	+				-0.1
3,071,211	-				+0.2
3,071,211	-				-0.6
3,071,211	-				+1.0
3,071,211	-				+3.0
3,071,211	-				+0.8
3,071,211	-				-0.0
3,071,227	+				+0.4
3,071,245	+				+1.5
3,071,246	-				-0.8
3,071,249	+				+3.6
3,071,249	+				+1.3
3,071,249	+				+0.9
3,071,250	-				-0.6
3,071,250	-				+0.1
3,071,288	+		Echvi_2590	0.14	-0.5
3,071,288	+		Echvi_2590	0.14	-0.0
3,071,291	+		Echvi_2590	0.14	-1.3
3,071,310	-		Echvi_2590	0.17	-0.4
3,071,417	+		Echvi_2590	0.30	-0.8
3,071,448	-		Echvi_2590	0.34	+0.3
3,071,448	-		Echvi_2590	0.34	-0.3
3,071,500	-		Echvi_2590	0.41	-0.4
3,071,596	+		Echvi_2590	0.53	-2.2
3,071,607	-		Echvi_2590	0.54	-2.6
3,071,645	+		Echvi_2590	0.59	-2.0
3,071,729	-		Echvi_2590	0.69	+0.0
3,071,773	+		Echvi_2590	0.75	-1.4
3,071,773	+		Echvi_2590	0.75	-0.4
3,071,774	-		Echvi_2590	0.75	-1.9
3,071,776	+		Echvi_2590	0.75	+0.7
3,071,780	-		Echvi_2590	0.76	-0.1
3,071,817	-		Echvi_2590	0.80	+1.0
3,071,837	+		Echvi_2590	0.83	+1.4
3,071,859	+		Echvi_2590	0.86	+1.4
3,071,860	-		Echvi_2590	0.86	-0.8
3,071,860	-		Echvi_2590	0.86	+0.5
3,071,861	+		Echvi_2590	0.86	+0.1
3,071,861	+		Echvi_2590	0.86	+0.3
3,071,861	+		Echvi_2590	0.86	+0.5
3,071,876	+		Echvi_2590	0.88	+0.1
3,071,914	+				-0.2
3,071,938	+				+0.6
3,071,939	-				-0.1
3,071,943	-				+0.3
3,071,947	+				-0.4
3,071,948	-				+0.5
3,071,948	-				+1.0
3,071,974	-				-0.1
3,072,008	-				-1.1
3,072,061	-				-0.6
3,072,061	-				+0.2
3,072,061	-				-1.0
3,072,106	-				+1.4
3,072,106	-				-0.5
3,072,149	+				-0.1