Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03682

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
3,843,046	-		CCNA_03681	0.32	-0.9
3,843,055	+		CCNA_03681	0.33	-0.1
3,843,063	-		CCNA_03681	0.34	-0.1
3,843,063	-		CCNA_03681	0.34	+2.6
3,843,088	-		CCNA_03681	0.37	+0.3
3,843,131	-		CCNA_03681	0.42	+0.3
3,843,140	-		CCNA_03681	0.43	+0.3
3,843,145	+		CCNA_03681	0.43	-0.1
3,843,145	+		CCNA_03681	0.43	-0.5
3,843,145	-		CCNA_03681	0.43	+0.1
3,843,266	-		CCNA_03681	0.57	+0.0
3,843,273	+		CCNA_03681	0.58	+0.9
3,843,273	+		CCNA_03681	0.58	+0.1
3,843,281	-		CCNA_03681	0.59	-0.4
3,843,307	-		CCNA_03681	0.62	+0.6
3,843,307	-		CCNA_03681	0.62	+0.6
3,843,347	-		CCNA_03681	0.66	-0.0
3,843,352	-		CCNA_03681	0.67	+0.4
3,843,431	-		CCNA_03681	0.76	-0.2
3,843,433	+		CCNA_03681	0.76	-1.0
3,843,462	-		CCNA_03681	0.79	-0.3
3,843,494	-		CCNA_03681	0.83	+0.2
3,843,499	+		CCNA_03681	0.83	-0.6
3,843,553	-		CCNA_03681	0.89	+1.5
3,843,580	+				-0.3
3,843,740	-				-0.5
3,843,769	-				+0.5
3,843,780	-				+0.3
3,843,780	-				-0.2
3,843,783	+				-0.6
3,843,785	+				-0.7
3,843,785	-				-0.3
3,843,793	-				-0.3
3,843,793	-				-0.2
3,843,834	+				-0.1
3,843,834	+				-0.6
3,843,854	-				-0.5
3,843,921	-				-0.5
3,843,934	+				-0.2
3,843,942	-				+0.5
3,843,942	-				-0.4
3,843,942	-				-0.6
3,843,942	-				-1.2
3,843,942	-				+0.0
3,843,953	-				+0.2
3,843,964	-				-0.7
3,844,048	+		CCNA_03682	0.14	+0.3
3,844,048	+		CCNA_03682	0.14	+0.2
3,844,072	+		CCNA_03682	0.18	+0.2
3,844,153	-		CCNA_03682	0.30	+0.6
3,844,210	-		CCNA_03682	0.38	+0.7
3,844,226	-		CCNA_03682	0.41	-1.1
3,844,240	+		CCNA_03682	0.43	+0.2
3,844,241	+		CCNA_03682	0.43	+0.5
3,844,241	+		CCNA_03682	0.43	-1.7
3,844,241	+		CCNA_03682	0.43	+0.3
3,844,249	-		CCNA_03682	0.44	-1.1
3,844,249	-		CCNA_03682	0.44	+0.6
3,844,249	-		CCNA_03682	0.44	-1.1
3,844,302	+		CCNA_03682	0.52	+0.3
3,844,312	+		CCNA_03682	0.53	+0.9
3,844,312	+		CCNA_03682	0.53	+0.0
3,844,312	+		CCNA_03682	0.53	+0.5
3,844,312	+		CCNA_03682	0.53	+0.2
3,844,312	+		CCNA_03682	0.53	+0.3
3,844,312	+		CCNA_03682	0.53	+1.6
3,844,320	-		CCNA_03682	0.54	+0.7
3,844,320	-		CCNA_03682	0.54	-0.9
3,844,324	+		CCNA_03682	0.55	+0.2
3,844,332	-		CCNA_03682	0.56	+1.1
3,844,332	-		CCNA_03682	0.56	-0.4
3,844,332	-		CCNA_03682	0.56	-0.2
3,844,358	+		CCNA_03682	0.60	-0.1
3,844,366	-		CCNA_03682	0.61	-0.6
3,844,366	-		CCNA_03682	0.61	+0.8
3,844,371	-		CCNA_03682	0.62	-0.5
3,844,371	-		CCNA_03682	0.62	-0.5
3,844,427	+		CCNA_03682	0.70	+0.8
3,844,471	-		CCNA_03682	0.77	-0.1
3,844,501	+		CCNA_03682	0.81	-1.3
3,844,501	+		CCNA_03682	0.81	+0.3
3,844,509	-		CCNA_03682	0.82	-1.9
3,844,509	-		CCNA_03682	0.82	+0.2
3,844,509	-		CCNA_03682	0.82	-0.3
3,844,542	+		CCNA_03682	0.87	-0.4
3,844,542	+		CCNA_03682	0.87	-0.3
3,844,544	+		CCNA_03682	0.87	+0.4
3,844,544	+		CCNA_03682	0.87	+0.1
3,844,550	-		CCNA_03682	0.88	-1.0
3,844,551	-		CCNA_03682	0.88	-0.4
3,844,552	-		CCNA_03682	0.88	-0.2
3,844,606	-				-0.9
3,844,620	+				+0.4
3,844,621	-				+1.4
3,844,638	+				-0.2
3,844,638	+				+0.3
3,844,643	+				-0.8
3,844,677	-				-0.1
3,844,677	-				+0.2
3,844,679	+				-1.6
3,844,687	-				+0.3
3,844,689	+				+0.3
3,844,735	+		CCNA_03683	0.10	+0.0
3,844,736	-		CCNA_03683	0.10	-1.1
3,844,736	-		CCNA_03683	0.10	-0.2
3,844,736	-		CCNA_03683	0.10	+0.6
3,844,749	+		CCNA_03683	0.12	+1.8
3,844,927	-		CCNA_03683	0.41	+0.6
3,845,035	+		CCNA_03683	0.58	-0.7
3,845,048	+		CCNA_03683	0.60	+0.3
3,845,125	-		CCNA_03683	0.72	+0.0
3,845,131	-		CCNA_03683	0.73	+0.6
3,845,160	+		CCNA_03683	0.77	-0.4
3,845,165	-		CCNA_03683	0.78	+0.6
3,845,168	-		CCNA_03683	0.79	-0.2
3,845,280	-				-0.6
3,845,280	-				-1.4
3,845,321	+				-0.4
3,845,322	-				-0.4
3,845,352	-				-0.1
3,845,533	-		CCNA_03684	0.34	+0.2
3,845,542	-		CCNA_03684	0.36	-0.9
3,845,572	+		CCNA_03684	0.40	-0.8
3,845,572	+		CCNA_03684	0.40	-0.1
3,845,572	+		CCNA_03684	0.40	+0.3
3,845,572	+		CCNA_03684	0.40	+0.2
3,845,572	-		CCNA_03684	0.40	-0.1
3,845,580	-		CCNA_03684	0.41	-2.0
3,845,580	-		CCNA_03684	0.41	+0.6