Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03613

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
3,766,679	+		CCNA_03611	0.82	-1.4
3,766,687	-		CCNA_03611	0.82	-0.0
3,766,696	+		CCNA_03611	0.83	-0.7
3,766,729	+		CCNA_03611	0.84	-0.4
3,766,731	+		CCNA_03611	0.85	-1.3
3,766,739	-		CCNA_03611	0.85	-0.8
3,766,739	-		CCNA_03611	0.85	+0.1
3,766,739	-		CCNA_03611	0.85	-0.0
3,766,740	-		CCNA_03611	0.85	+0.4
3,766,741	+		CCNA_03611	0.85	+0.3
3,766,741	+		CCNA_03611	0.85	+0.2
3,766,741	+		CCNA_03611	0.85	+0.3
3,766,741	+		CCNA_03611	0.85	+0.3
3,766,747	-		CCNA_03611	0.85	-0.5
3,766,749	-		CCNA_03611	0.86	-1.6
3,766,749	-		CCNA_03611	0.86	+1.0
3,766,749	-		CCNA_03611	0.86	+0.4
3,766,749	-		CCNA_03611	0.86	-0.4
3,766,749	-		CCNA_03611	0.86	+1.0
3,766,752	+		CCNA_03611	0.86	-0.5
3,766,760	-		CCNA_03611	0.86	+0.7
3,766,845	+				+0.2
3,766,864	-				+0.5
3,766,864	-				-0.8
3,766,876	+				-0.3
3,766,886	+				+0.0
3,766,891	+				+0.1
3,766,908	+				-1.6
3,766,908	+				-0.1
3,766,961	+				-0.3
3,766,969	-				+0.0
3,767,018	+				-0.4
3,767,018	+				-1.0
3,767,026	-				+0.0
3,767,040	+				-0.6
3,767,040	+				+1.0
3,767,048	-				+0.5
3,767,048	-				+0.6
3,767,048	-				+0.1
3,767,130	+		CCNA_03612	0.41	-1.1
3,767,133	-		CCNA_03612	0.42	+0.2
3,767,160	-		CCNA_03612	0.53	+0.3
3,767,160	-		CCNA_03612	0.53	+0.6
3,767,161	+		CCNA_03612	0.53	-0.7
3,767,162	-		CCNA_03612	0.54	+0.0
3,767,195	-		CCNA_03612	0.67	-0.1
3,767,225	-		CCNA_03612	0.79	-0.7
3,767,236	+		CCNA_03612	0.84	+0.3
3,767,244	-		CCNA_03612	0.87	+0.8
3,767,244	-		CCNA_03612	0.87	+1.0
3,767,244	-		CCNA_03612	0.87	+0.4
3,767,276	+				-0.3
3,767,398	+				-0.8
3,767,420	-				-0.5
3,767,434	+				-0.2
3,767,439	+				-0.4
3,767,439	+				-1.0
3,767,463	-				-1.0
3,767,526	+				+0.0
3,767,526	+				-0.2
3,767,528	+				-0.2
3,767,534	-				-1.6
3,767,542	+				+0.3
3,767,550	-				+0.6
3,767,560	+				-0.2
3,767,589	+				-1.1
3,767,607	-				-1.1
3,767,618	+				-0.3
3,767,618	+				-0.8
3,767,621	-				+0.8
3,767,626	-				+0.3
3,767,699	+				-0.4
3,767,715	-				-0.7
3,767,720	+				-0.2
3,767,742	-		CCNA_03613	0.15	-0.3
3,767,758	+		CCNA_03613	0.18	-1.0
3,767,758	+		CCNA_03613	0.18	+0.1
3,767,797	+		CCNA_03613	0.27	-0.2
3,767,798	+		CCNA_03613	0.27	-0.0
3,767,806	-		CCNA_03613	0.29	-0.0
3,767,807	+		CCNA_03613	0.29	+0.3
3,767,817	+		CCNA_03613	0.31	+0.9
3,767,825	-		CCNA_03613	0.33	-1.0
3,767,860	+		CCNA_03613	0.41	+0.3
3,767,875	-		CCNA_03613	0.44	-1.6
3,767,881	+		CCNA_03613	0.45	+0.5
3,767,897	+		CCNA_03613	0.49	+1.9
3,767,900	-		CCNA_03613	0.49	-0.3
3,767,940	-		CCNA_03613	0.58	-0.7
3,767,940	-		CCNA_03613	0.58	-0.6
3,767,950	-		CCNA_03613	0.60	+0.3
3,767,951	-		CCNA_03613	0.61	+1.7
3,767,961	-		CCNA_03613	0.63	-0.6
3,768,033	+		CCNA_03613	0.79	+0.4
3,768,033	+		CCNA_03613	0.79	-0.7
3,768,033	+		CCNA_03613	0.79	-0.1
3,768,041	-		CCNA_03613	0.81	+0.7
3,768,041	-		CCNA_03613	0.81	-0.4
3,768,041	-		CCNA_03613	0.81	-1.0
3,768,041	-		CCNA_03613	0.81	-0.6
3,768,041	-		CCNA_03613	0.81	-0.2
3,768,048	+		CCNA_03613	0.82	+0.6
3,768,071	+		CCNA_03613	0.87	+0.6
3,768,082	-		CCNA_03613	0.90	-0.4
3,768,096	-				+0.2
3,768,115	+				+0.2
3,768,166	+				+0.1
3,768,166	+				+0.0
3,768,166	+				-0.2
3,768,168	-				-1.1
3,768,174	-				-2.0
3,768,185	+				-0.1
3,768,185	+				+0.1
3,768,215	+				+0.5
3,768,223	-				+1.2
3,768,223	-				-0.7
3,768,239	-		CCNA_03614	0.12	-1.7
3,768,250	+		CCNA_03614	0.14	-0.8
3,768,250	+		CCNA_03614	0.14	-0.3
3,768,258	-		CCNA_03614	0.16	-0.3
3,768,268	+		CCNA_03614	0.19	+0.4
3,768,319	+		CCNA_03614	0.31	-1.2
3,768,320	+		CCNA_03614	0.31	-0.8
3,768,321	+		CCNA_03614	0.31	+0.1
3,768,321	+		CCNA_03614	0.31	+1.6
3,768,322	-		CCNA_03614	0.31	+0.4
3,768,322	-		CCNA_03614	0.31	+0.5
3,768,327	+		CCNA_03614	0.32	+0.5
3,768,327	-		CCNA_03614	0.32	+0.1
3,768,334	+		CCNA_03614	0.34	-0.1
3,768,351	+		CCNA_03614	0.38	-0.0
3,768,369	-		CCNA_03614	0.42	+0.4
3,768,388	-		CCNA_03614	0.47	+0.6
3,768,412	+		CCNA_03614	0.52	-0.0
3,768,433	-		CCNA_03614	0.57	+0.2
3,768,452	+		CCNA_03614	0.62	+0.2
3,768,452	+		CCNA_03614	0.62	-0.6
3,768,460	-		CCNA_03614	0.63	-0.1
3,768,554	-		CCNA_03614	0.85	+0.0
3,768,562	+		CCNA_03614	0.87	-0.2
3,768,593	+				+0.6
3,768,605	+				+0.8
3,768,605	+				-0.4
3,768,674	-				-0.4
3,768,704	-				-0.4
3,768,707	+				+0.4
3,768,747	+				-0.8
3,768,747	+				-0.2
3,768,813	+				+0.4
3,768,868	-				+0.4
3,768,920	-				-0.4
3,768,940	-		CCNA_03615	0.11	-0.2
3,768,999	-		CCNA_03615	0.14	+0.1
3,768,999	-		CCNA_03615	0.14	+0.0
3,769,004	-		CCNA_03615	0.14	+0.6
3,769,009	-		CCNA_03615	0.14	-0.1
3,769,049	+		CCNA_03615	0.16	-0.2
3,769,083	+		CCNA_03615	0.18	-0.2
3,769,083	+		CCNA_03615	0.18	-0.0
3,769,098	+		CCNA_03615	0.18	+0.2
3,769,103	+		CCNA_03615	0.19	-0.1
3,769,117	+		CCNA_03615	0.19	+0.3