Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03588

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
3,741,258	-		CCNA_03586	0.15	-0.9
3,741,259	-		CCNA_03586	0.16	+0.0
3,741,273	+		CCNA_03586	0.17	+0.0
3,741,281	-		CCNA_03586	0.18	+0.3
3,741,309	+		CCNA_03586	0.22	+0.0
3,741,309	+		CCNA_03586	0.22	-0.4
3,741,317	-		CCNA_03586	0.23	+0.9
3,741,374	+		CCNA_03586	0.29	+0.2
3,741,508	+		CCNA_03586	0.45	+1.3
3,741,528	+		CCNA_03586	0.48	-0.3
3,741,541	+		CCNA_03586	0.49	-0.2
3,741,744	+		CCNA_03586	0.74	+0.2
3,741,759	+		CCNA_03586	0.76	+0.3
3,741,793	+		CCNA_03586	0.80	+0.2
3,741,897	-				-0.9
3,741,934	+				-0.2
3,741,987	+				+0.4
3,741,987	+				-0.2
3,742,005	+				+0.0
3,742,011	+				-0.7
3,742,013	-				+0.4
3,742,019	-				+0.8
3,742,107	-		CCNA_03587	0.60	-0.2
3,742,179	-				+0.0
3,742,210	-				+0.6
3,742,218	-				+0.9
3,742,245	+				-0.7
3,742,263	-				+0.1
3,742,322	+				-0.6
3,742,354	+				-0.5
3,742,362	-				-1.1
3,742,372	+				+0.3
3,742,386	+				-0.7
3,742,417	-				-1.0
3,742,417	-				-0.8
3,742,417	-				-1.1
3,742,474	+		CCNA_03588	0.13	-0.5
3,742,546	+		CCNA_03588	0.17	-0.1
3,742,554	-		CCNA_03588	0.18	+1.0
3,742,581	+		CCNA_03588	0.19	+1.0
3,742,581	+		CCNA_03588	0.19	+0.0
3,742,593	+		CCNA_03588	0.20	-0.5
3,742,685	+		CCNA_03588	0.25	+0.9
3,742,706	-		CCNA_03588	0.27	+0.6
3,742,713	+		CCNA_03588	0.27	-1.2
3,742,721	-		CCNA_03588	0.27	-0.2
3,742,726	-		CCNA_03588	0.28	-0.6
3,742,727	-		CCNA_03588	0.28	-1.3
3,742,795	+		CCNA_03588	0.32	-1.0
3,742,823	-		CCNA_03588	0.33	+0.1
3,742,844	+		CCNA_03588	0.35	-0.5
3,742,976	+		CCNA_03588	0.42	-0.2
3,742,977	+		CCNA_03588	0.42	+1.6
3,742,987	+		CCNA_03588	0.43	+1.2
3,743,001	-		CCNA_03588	0.44	+0.4
3,743,046	-		CCNA_03588	0.47	+0.8
3,743,050	+		CCNA_03588	0.47	-0.5
3,743,058	-		CCNA_03588	0.47	+0.3
3,743,183	+		CCNA_03588	0.55	+0.4
3,743,222	-		CCNA_03588	0.57	+0.6
3,743,228	+		CCNA_03588	0.57	-0.5
3,743,236	-		CCNA_03588	0.58	+0.5
3,743,236	-		CCNA_03588	0.58	-0.4
3,743,317	+		CCNA_03588	0.62	+1.2
3,743,325	-		CCNA_03588	0.63	-0.2
3,743,335	-		CCNA_03588	0.63	-1.0
3,743,363	+		CCNA_03588	0.65	-1.8
3,743,368	+		CCNA_03588	0.65	-0.5
3,743,423	+		CCNA_03588	0.69	-1.2
3,743,431	-		CCNA_03588	0.69	-0.5
3,743,453	-		CCNA_03588	0.70	+1.3
3,743,461	-		CCNA_03588	0.71	+0.2
3,743,518	+		CCNA_03588	0.74	-0.7
3,743,525	+		CCNA_03588	0.75	-1.4
3,743,540	-		CCNA_03588	0.76	+0.7
3,743,545	-		CCNA_03588	0.76	-0.1
3,743,618	-		CCNA_03588	0.80	-1.1
3,743,647	+		CCNA_03588	0.82	+0.0
3,743,694	+		CCNA_03588	0.85	+0.5
3,743,698	+		CCNA_03588	0.85	+0.3
3,743,699	+		CCNA_03588	0.85	+0.0
3,743,699	+		CCNA_03588	0.85	-0.7
3,743,706	-		CCNA_03588	0.85	-1.1
3,743,765	+		CCNA_03588	0.89	-1.7
3,743,788	-				-0.6
3,743,853	-				-0.9
3,743,861	+				+0.6
3,743,891	-				+0.1
3,744,051	-		CCNA_03589	0.16	+0.2
3,744,051	-		CCNA_03589	0.16	-1.1
3,744,051	-		CCNA_03589	0.16	-0.1
3,744,051	-		CCNA_03589	0.16	-0.1
3,744,077	-		CCNA_03589	0.20	+0.3
3,744,082	-		CCNA_03589	0.21	+0.5
3,744,085	+		CCNA_03589	0.22	-1.3
3,744,093	-		CCNA_03589	0.23	-1.3
3,744,123	-		CCNA_03589	0.28	+0.4
3,744,257	-		CCNA_03589	0.50	+1.6
3,744,289	-		CCNA_03589	0.55	+0.3
3,744,333	+		CCNA_03589	0.63	+0.5
3,744,341	-		CCNA_03589	0.64	+0.9
3,744,343	+		CCNA_03589	0.64	-1.6
3,744,343	+		CCNA_03589	0.64	-1.2
3,744,343	+		CCNA_03589	0.64	-0.8
3,744,352	-		CCNA_03589	0.66	-0.5
3,744,354	+		CCNA_03589	0.66	+0.8
3,744,358	-		CCNA_03589	0.67	-0.8
3,744,389	+		CCNA_03589	0.72	-0.4
3,744,464	-		CCNA_03589	0.84	-0.1
3,744,544	-				+2.4
3,744,635	-		CCNA_03590	0.40	+0.4
3,744,638	+		CCNA_03590	0.41	+0.7
3,744,653	-		CCNA_03590	0.49	+0.0
3,744,656	+		CCNA_03590	0.51	-0.3
3,744,664	-		CCNA_03590	0.55	+0.4
3,744,664	-		CCNA_03590	0.55	+0.8
3,744,664	-		CCNA_03590	0.55	+0.4
3,744,688	+		CCNA_03590	0.68	+0.5
3,744,691	+		CCNA_03590	0.70	+0.1
3,744,696	-		CCNA_03590	0.73	-0.0
3,744,736	+				+0.0
3,744,788	-				+0.0
3,744,842	-				-0.8
3,744,871	+				-1.6