Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03227

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
3,388,736	+		CCNA_03226	0.28	-0.4
3,388,769	-		CCNA_03226	0.31	-0.7
3,388,809	+		CCNA_03226	0.34	+0.2
3,388,888	+		CCNA_03226	0.40	+0.5
3,388,911	-		CCNA_03226	0.41	-1.5
3,388,934	+		CCNA_03226	0.43	-1.0
3,388,947	+		CCNA_03226	0.44	+1.3
3,388,947	+		CCNA_03226	0.44	+2.3
3,388,947	+		CCNA_03226	0.44	+0.9
3,388,947	+		CCNA_03226	0.44	-1.7
3,388,947	+		CCNA_03226	0.44	+0.8
3,388,952	+		CCNA_03226	0.44	-0.6
3,388,955	-		CCNA_03226	0.45	-1.4
3,388,955	-		CCNA_03226	0.45	-1.0
3,388,960	-		CCNA_03226	0.45	-0.8
3,388,979	-		CCNA_03226	0.46	+0.1
3,388,984	-		CCNA_03226	0.47	+1.7
3,388,989	-		CCNA_03226	0.47	+1.4
3,388,989	-		CCNA_03226	0.47	-1.8
3,388,993	+		CCNA_03226	0.48	-0.3
3,389,018	-		CCNA_03226	0.49	+0.5
3,389,018	-		CCNA_03226	0.49	-0.0
3,389,053	+		CCNA_03226	0.52	-0.2
3,389,054	-		CCNA_03226	0.52	-0.3
3,389,066	+		CCNA_03226	0.53	-0.8
3,389,074	-		CCNA_03226	0.54	+0.2
3,389,112	+		CCNA_03226	0.57	+0.7
3,389,193	+		CCNA_03226	0.63	-1.0
3,389,195	+		CCNA_03226	0.63	-1.9
3,389,201	-		CCNA_03226	0.63	+0.1
3,389,208	+		CCNA_03226	0.64	-0.2
3,389,227	-		CCNA_03226	0.65	+0.4
3,389,265	+		CCNA_03226	0.68	+0.9
3,389,265	+		CCNA_03226	0.68	-0.1
3,389,273	-		CCNA_03226	0.69	-0.4
3,389,273	-		CCNA_03226	0.69	+0.6
3,389,273	-		CCNA_03226	0.69	-2.0
3,389,273	-		CCNA_03226	0.69	+1.0
3,389,273	-		CCNA_03226	0.69	-0.0
3,389,273	-		CCNA_03226	0.69	+0.4
3,389,273	-		CCNA_03226	0.69	-0.1
3,389,288	-		CCNA_03226	0.70	+0.5
3,389,301	+		CCNA_03226	0.71	-0.8
3,389,301	+		CCNA_03226	0.71	-2.0
3,389,301	+		CCNA_03226	0.71	-1.8
3,389,365	-		CCNA_03226	0.76	-0.2
3,389,387	+		CCNA_03226	0.77	-0.3
3,389,402	+		CCNA_03226	0.79	-0.9
3,389,410	-		CCNA_03226	0.79	-0.1
3,389,410	-		CCNA_03226	0.79	+0.4
3,389,414	+		CCNA_03226	0.79	+0.1
3,389,419	-		CCNA_03226	0.80	-0.0
3,389,455	-		CCNA_03226	0.83	-0.4
3,389,463	-		CCNA_03226	0.83	-0.6
3,389,510	-		CCNA_03226	0.87	-0.2
3,389,538	-		CCNA_03226	0.89	+0.8
3,389,581	+				-0.1
3,389,593	-				+0.3
3,389,620	+				-1.7
3,389,628	-				+0.2
3,389,640	+				+0.2
3,389,646	+				+0.3
3,389,646	+				-1.5
3,389,646	-				-0.0
3,389,647	-				-0.4
3,389,654	-				-1.7
3,389,669	-				+0.4
3,389,686	-				-0.1
3,389,697	+				-0.0
3,389,705	-				+0.9
3,389,732	+				+0.7
3,389,742	+				-1.6
3,389,766	+				+0.9
3,389,774	-				-1.0
3,389,784	-				-0.3
3,389,787	+				-1.3
3,389,787	+				+0.4
3,389,787	+				-1.7
3,389,787	+				+0.4
3,389,787	+				-0.1
3,389,787	+				+0.1
3,389,787	+				-0.7
3,389,787	+				-1.1
3,389,787	+				-0.3
3,389,787	+				+0.4
3,389,787	+				-0.8
3,389,795	-				-0.1
3,389,795	-				-0.4
3,389,795	-				+0.2
3,389,795	-				+0.9
3,389,795	-				+0.3
3,389,795	-				+0.2
3,389,795	-				+0.0
3,389,795	-				+1.0
3,389,795	-				-0.5
3,389,795	-				-0.3
3,389,795	-				+0.5
3,389,800	-				+0.5
3,389,833	+				-0.0
3,389,834	+				-0.2
3,389,834	+				+0.1
3,389,842	-				+1.7
3,389,867	-				+0.2
3,389,869	+				-0.6
3,389,900	-				+0.1
3,389,904	-				-0.0
3,389,922	-				-1.0
3,389,924	+				-0.9
3,389,925	+				+1.4
3,389,932	-				+0.2
3,389,966	+				-1.6
3,389,975	+		CCNA_03227	0.10	-0.2
3,389,982	+		CCNA_03227	0.10	-0.1
3,390,010	+		CCNA_03227	0.12	-0.4
3,390,010	+		CCNA_03227	0.12	-1.0
3,390,015	+		CCNA_03227	0.12	-1.0
3,390,018	-		CCNA_03227	0.12	+0.2
3,390,035	+		CCNA_03227	0.13	-0.1
3,390,042	-		CCNA_03227	0.13	-0.4
3,390,043	-		CCNA_03227	0.13	+1.1
3,390,063	+		CCNA_03227	0.14	+0.7
3,390,070	+		CCNA_03227	0.14	+0.4
3,390,071	-		CCNA_03227	0.14	-0.1
3,390,071	-		CCNA_03227	0.14	-0.0
3,390,115	+		CCNA_03227	0.16	-1.9
3,390,123	-		CCNA_03227	0.16	-0.3
3,390,136	+		CCNA_03227	0.17	-0.8
3,390,137	-		CCNA_03227	0.17	+0.3
3,390,144	-		CCNA_03227	0.17	+1.5
3,390,145	-		CCNA_03227	0.17	+0.7
3,390,168	-		CCNA_03227	0.18	+0.6
3,390,193	-		CCNA_03227	0.19	-1.2
3,390,193	-		CCNA_03227	0.19	+1.9
3,390,207	-		CCNA_03227	0.20	+1.2
3,390,209	+		CCNA_03227	0.20	+0.2
3,390,217	-		CCNA_03227	0.20	+0.7
3,390,233	+		CCNA_03227	0.21	-2.3
3,390,250	+		CCNA_03227	0.22	+0.7
3,390,284	-		CCNA_03227	0.23	+0.6
3,390,284	-		CCNA_03227	0.23	+1.1
3,390,284	-		CCNA_03227	0.23	-0.0
3,390,289	-		CCNA_03227	0.23	-0.2
3,390,356	-		CCNA_03227	0.26	+0.1
3,390,360	+		CCNA_03227	0.26	-1.1
3,390,368	-		CCNA_03227	0.26	-0.1
3,390,368	-		CCNA_03227	0.26	+0.3
3,390,368	-		CCNA_03227	0.26	+0.9
3,390,368	-		CCNA_03227	0.26	+0.1
3,390,368	-		CCNA_03227	0.26	-0.1
3,390,370	-		CCNA_03227	0.27	+0.3
3,390,429	-		CCNA_03227	0.29	+0.1
3,390,452	-		CCNA_03227	0.30	+0.0
3,390,467	+		CCNA_03227	0.31	-0.2
3,390,470	-		CCNA_03227	0.31	-0.4
3,390,470	-		CCNA_03227	0.31	-1.8
3,390,470	-		CCNA_03227	0.31	+0.1
3,390,470	-		CCNA_03227	0.31	+0.3
3,390,495	+		CCNA_03227	0.32	-0.2
3,390,504	-		CCNA_03227	0.32	+0.4
3,390,504	-		CCNA_03227	0.32	-1.7
3,390,505	+		CCNA_03227	0.32	+0.2
3,390,510	+		CCNA_03227	0.32	-1.1
3,390,510	+		CCNA_03227	0.32	-0.6
3,390,513	-		CCNA_03227	0.33	-0.5
3,390,518	-		CCNA_03227	0.33	-0.2
3,390,520	+		CCNA_03227	0.33	-0.3
3,390,528	-		CCNA_03227	0.33	-0.4
3,390,550	-		CCNA_03227	0.34	+1.4
3,390,582	+		CCNA_03227	0.35	+0.3
3,390,592	+		CCNA_03227	0.36	-1.3
3,390,616	-		CCNA_03227	0.37	+0.3
3,390,654	+		CCNA_03227	0.38	+0.4
3,390,664	+		CCNA_03227	0.39	-1.1
3,390,690	+		CCNA_03227	0.40	-0.0
3,390,727	+		CCNA_03227	0.41	-1.0
3,390,750	+		CCNA_03227	0.42	+1.7
3,390,768	-		CCNA_03227	0.43	-0.2
3,390,769	-		CCNA_03227	0.43	+0.2
3,390,813	-		CCNA_03227	0.45	+0.4
3,390,818	+		CCNA_03227	0.45	-0.3
3,390,826	-		CCNA_03227	0.46	-0.2
3,390,827	-		CCNA_03227	0.46	+0.2
3,390,827	-		CCNA_03227	0.46	+0.6
3,390,827	-		CCNA_03227	0.46	-0.7
3,390,915	+		CCNA_03227	0.49	-1.6
3,391,033	+		CCNA_03227	0.54	+0.4
3,391,085	-		CCNA_03227	0.56	+0.4
3,391,086	+		CCNA_03227	0.57	-1.7
3,391,094	-		CCNA_03227	0.57	+0.8
3,391,134	-		CCNA_03227	0.59	-2.3
3,391,168	-		CCNA_03227	0.60	-0.1
3,391,179	+		CCNA_03227	0.60	-0.3
3,391,179	+		CCNA_03227	0.60	-1.2
3,391,187	-		CCNA_03227	0.61	-0.2
3,391,208	-		CCNA_03227	0.62	-0.9
3,391,216	-		CCNA_03227	0.62	-1.8
3,391,217	-		CCNA_03227	0.62	-0.8
3,391,217	-		CCNA_03227	0.62	+1.1
3,391,237	+		CCNA_03227	0.63	-0.6
3,391,255	-		CCNA_03227	0.64	-0.7
3,391,275	+		CCNA_03227	0.64	+0.6
3,391,282	+		CCNA_03227	0.65	-1.4
3,391,282	+		CCNA_03227	0.65	+0.8
3,391,290	-		CCNA_03227	0.65	-0.2
3,391,290	-		CCNA_03227	0.65	+0.2
3,391,314	-		CCNA_03227	0.66	-0.1
3,391,319	-		CCNA_03227	0.66	+0.7
3,391,332	-		CCNA_03227	0.67	-0.7
3,391,355	+		CCNA_03227	0.68	-0.6
3,391,355	+		CCNA_03227	0.68	-2.1
3,391,361	-		CCNA_03227	0.68	+0.6
3,391,363	-		CCNA_03227	0.68	-0.3
3,391,363	-		CCNA_03227	0.68	+0.3
3,391,363	-		CCNA_03227	0.68	+0.5
3,391,363	-		CCNA_03227	0.68	+0.1
3,391,379	-		CCNA_03227	0.69	+0.7
3,391,424	+		CCNA_03227	0.71	+0.0
3,391,431	-		CCNA_03227	0.71	-0.1
3,391,431	-		CCNA_03227	0.71	+0.0
3,391,431	-		CCNA_03227	0.71	+0.2
3,391,431	-		CCNA_03227	0.71	-1.7
3,391,454	+		CCNA_03227	0.72	-0.8
3,391,463	-		CCNA_03227	0.72	+0.7
3,391,482	-		CCNA_03227	0.73	+0.0
3,391,487	-		CCNA_03227	0.73	-0.5
3,391,521	+		CCNA_03227	0.75	-1.0
3,391,529	+		CCNA_03227	0.75	-0.4
3,391,537	-		CCNA_03227	0.75	-0.3
3,391,560	-		CCNA_03227	0.76	-0.4
3,391,563	+		CCNA_03227	0.76	-0.8
3,391,563	+		CCNA_03227	0.76	-1.2
3,391,563	+		CCNA_03227	0.76	-0.9
3,391,563	+		CCNA_03227	0.76	-0.4
3,391,576	-		CCNA_03227	0.77	-0.7
3,391,576	-		CCNA_03227	0.77	-0.1
3,391,576	-		CCNA_03227	0.77	-0.5
3,391,635	+		CCNA_03227	0.79	-0.2
3,391,635	+		CCNA_03227	0.79	-1.8
3,391,643	-		CCNA_03227	0.80	-0.4
3,391,643	-		CCNA_03227	0.80	+0.4
3,391,650	-		CCNA_03227	0.80	-1.3
3,391,686	+		CCNA_03227	0.82	-1.7
3,391,694	-		CCNA_03227	0.82	-0.4
3,391,704	+		CCNA_03227	0.82	-0.9
3,391,721	-		CCNA_03227	0.83	-1.7
3,391,740	-		CCNA_03227	0.84	+0.2
3,391,740	-		CCNA_03227	0.84	-0.2
3,391,740	-		CCNA_03227	0.84	-1.5
3,391,759	+		CCNA_03227	0.85	-1.8
3,391,823	+		CCNA_03227	0.87	-0.4
3,391,829	+		CCNA_03227	0.88	-0.7
3,391,837	-		CCNA_03227	0.88	-0.4
3,391,854	+		CCNA_03227	0.89	-2.1
3,391,854	-		CCNA_03227	0.89	-0.3
3,391,861	+		CCNA_03227	0.89	-1.3
3,391,862	+		CCNA_03227	0.89	-1.7
3,391,869	-		CCNA_03227	0.89	+0.4
3,391,871	+		CCNA_03227	0.89	-0.7
3,391,874	-		CCNA_03227	0.89	+0.7
3,391,912	-				-1.7
3,391,915	+				+0.1
3,391,937	+				+1.1
3,391,939	+				-0.5
3,391,939	-				-0.6
3,391,979	-				-0.7
3,391,987	-				+0.6
3,392,015	+				-0.7
3,392,020	+				+0.7
3,392,024	+				-1.1
3,392,025	+				-1.9
3,392,025	+				-3.8
3,392,025	+				-2.1
3,392,036	+				-2.1
3,392,056	+				-1.0
3,392,069	-				+0.9
3,392,090	-				-0.5
3,392,090	-				+0.1
3,392,098	+				-1.7
3,392,106	-				+1.5
3,392,122	+				-0.1
3,392,130	-				+0.7
3,392,137	+				+0.4
3,392,145	-				-0.4
3,392,241	+				-0.7
3,392,249	-				-0.9
3,392,289	-				+0.3
3,392,292	-				+0.9
3,392,294	+				-0.3
3,392,314	-				-1.3
3,392,329	-				-0.3
3,392,410	-				+0.2
3,392,428	+				-1.5
3,392,436	-				-0.8
3,392,450	-				+0.2
3,392,478	-		CCNA_03228	0.11	-1.4
3,392,507	-		CCNA_03228	0.12	-0.1
3,392,527	+		CCNA_03228	0.13	-0.3
3,392,527	+		CCNA_03228	0.13	+0.8
3,392,542	+		CCNA_03228	0.14	-0.4
3,392,562	-		CCNA_03228	0.15	-0.6
3,392,575	+		CCNA_03228	0.16	-0.1
3,392,600	+		CCNA_03228	0.17	-0.4
3,392,600	+		CCNA_03228	0.17	-1.0
3,392,603	-		CCNA_03228	0.17	-0.2
3,392,608	-		CCNA_03228	0.17	+0.0
3,392,608	-		CCNA_03228	0.17	+0.1
3,392,608	-		CCNA_03228	0.17	+0.0
3,392,608	-		CCNA_03228	0.17	+0.4
3,392,609	-		CCNA_03228	0.17	+0.0
3,392,612	+		CCNA_03228	0.18	-0.3
3,392,613	+		CCNA_03228	0.18	+0.1
3,392,636	+		CCNA_03228	0.19	-0.8
3,392,680	+		CCNA_03228	0.21	-0.6
3,392,700	-		CCNA_03228	0.22	-0.6
3,392,700	-		CCNA_03228	0.22	+0.4
3,392,702	+		CCNA_03228	0.22	+0.4
3,392,703	+		CCNA_03228	0.22	-0.1
3,392,705	-		CCNA_03228	0.22	+0.0
3,392,707	+		CCNA_03228	0.22	-0.8
3,392,720	-		CCNA_03228	0.23	+0.1
3,392,734	-		CCNA_03228	0.24	-0.5
3,392,770	+		CCNA_03228	0.25	+0.7
3,392,770	+		CCNA_03228	0.25	+0.4
3,392,778	-		CCNA_03228	0.26	-0.7
3,392,780	+		CCNA_03228	0.26	+0.6
3,392,788	-		CCNA_03228	0.26	+1.1
3,392,815	+		CCNA_03228	0.28	-0.3
3,392,823	-		CCNA_03228	0.28	+0.3
3,392,830	+		CCNA_03228	0.28	-0.2
3,392,833	-		CCNA_03228	0.29	-0.0
3,392,837	+		CCNA_03228	0.29	+0.6
3,392,843	-		CCNA_03228	0.29	+0.1
3,392,855	-		CCNA_03228	0.30	-0.4
3,392,859	+		CCNA_03228	0.30	+0.1
3,392,923	-		CCNA_03228	0.33	+0.3
3,392,924	+		CCNA_03228	0.33	-0.4
3,392,975	+		CCNA_03228	0.36	+0.1
3,392,983	-		CCNA_03228	0.36	-2.4
3,392,984	-		CCNA_03228	0.36	+1.1
3,393,014	+		CCNA_03228	0.37	+1.4
3,393,020	+		CCNA_03228	0.38	-0.2
3,393,025	+		CCNA_03228	0.38	+0.3
3,393,030	+		CCNA_03228	0.38	-1.1
3,393,030	+		CCNA_03228	0.38	-0.9
3,393,030	+		CCNA_03228	0.38	-1.0
3,393,033	-		CCNA_03228	0.38	-0.5
3,393,038	-		CCNA_03228	0.39	-0.6
3,393,038	-		CCNA_03228	0.39	+0.2
3,393,038	-		CCNA_03228	0.39	-0.9
3,393,038	-		CCNA_03228	0.39	+0.6
3,393,038	-		CCNA_03228	0.39	-0.4
3,393,038	-		CCNA_03228	0.39	+0.1
3,393,038	-		CCNA_03228	0.39	+0.7
3,393,061	+		CCNA_03228	0.40	+0.7
3,393,081	-		CCNA_03228	0.41	+0.1
3,393,081	-		CCNA_03228	0.41	-0.6
3,393,086	-		CCNA_03228	0.41	-0.6
3,393,086	-		CCNA_03228	0.41	-0.8