Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03076

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
3,224,543	+		CCNA_03074	0.52	-1.1
3,224,545	+		CCNA_03074	0.52	-0.6
3,224,551	-		CCNA_03074	0.53	-0.6
3,224,551	-		CCNA_03074	0.53	-0.3
3,224,551	-		CCNA_03074	0.53	+0.6
3,224,551	-		CCNA_03074	0.53	-0.8
3,224,558	-		CCNA_03074	0.54	-1.1
3,224,563	-		CCNA_03074	0.55	-2.3
3,224,584	-		CCNA_03074	0.58	-0.6
3,224,620	+		CCNA_03074	0.63	+1.4
3,224,654	-		CCNA_03074	0.67	+0.6
3,224,723	-		CCNA_03074	0.77	-1.0
3,224,723	-		CCNA_03074	0.77	-1.1
3,224,731	-		CCNA_03074	0.78	-0.5
3,224,741	-		CCNA_03074	0.80	-0.8
3,224,751	-		CCNA_03074	0.81	-0.1
3,224,762	-		CCNA_03074	0.82	-0.8
3,224,769	+		CCNA_03074	0.83	-0.5
3,224,775	+		CCNA_03074	0.84	-1.7
3,224,783	-		CCNA_03074	0.85	+1.0
3,224,810	+		CCNA_03074	0.89	+0.4
3,224,810	+		CCNA_03074	0.89	-0.3
3,224,818	-				-0.4
3,224,818	-				-0.9
3,224,887	-				-0.2
3,224,903	+				-2.3
3,224,903	+				-1.4
3,224,903	+				+0.6
3,224,903	+				-1.0
3,224,911	-				+0.4
3,224,931	+				-0.1
3,224,972	+		CCNA_03075	0.16	+0.5
3,224,972	+		CCNA_03075	0.16	-0.3
3,224,972	+		CCNA_03075	0.16	-1.2
3,224,972	+		CCNA_03075	0.16	-0.3
3,224,980	-		CCNA_03075	0.17	+0.1
3,224,980	-		CCNA_03075	0.17	+1.1
3,225,015	+		CCNA_03075	0.24	-0.2
3,225,071	+		CCNA_03075	0.34	-0.5
3,225,071	+		CCNA_03075	0.34	-0.0
3,225,101	+		CCNA_03075	0.39	-1.3
3,225,104	-		CCNA_03075	0.40	-1.6
3,225,109	-		CCNA_03075	0.41	-0.9
3,225,126	-		CCNA_03075	0.44	-1.0
3,225,130	+		CCNA_03075	0.44	+0.0
3,225,199	+		CCNA_03075	0.57	-0.1
3,225,199	+		CCNA_03075	0.57	+0.4
3,225,227	+		CCNA_03075	0.62	-2.0
3,225,243	-		CCNA_03075	0.65	-2.1
3,225,243	-		CCNA_03075	0.65	-0.3
3,225,243	-		CCNA_03075	0.65	-1.7
3,225,248	-		CCNA_03075	0.66	+0.6
3,225,248	-		CCNA_03075	0.66	-0.5
3,225,279	+		CCNA_03075	0.71	-0.4
3,225,298	+		CCNA_03075	0.75	-0.4
3,225,306	-		CCNA_03075	0.76	-0.6
3,225,328	-		CCNA_03075	0.80	+0.1
3,225,339	+		CCNA_03075	0.82	-1.5
3,225,347	-		CCNA_03075	0.84	-0.1
3,225,355	+		CCNA_03075	0.85	-0.3
3,225,363	-		CCNA_03075	0.87	+0.6
3,225,389	+				+0.7
3,225,421	-				-0.4
3,225,452	-				+1.2
3,225,475	+				-1.5
3,225,497	+				-0.7
3,225,522	-				+1.7
3,225,522	-				+0.7
3,225,554	-				-1.0
3,225,590	+				-0.1
3,225,591	-				-0.2
3,225,598	-				-0.6
3,225,598	-				+1.7
3,225,621	-				-0.5
3,225,657	-				+0.8
3,225,658	-				+0.4
3,225,689	-				+0.3
3,225,734	+				+2.4
3,225,735	-				+0.2
3,225,735	-				-1.9
3,225,737	-				+0.7
3,225,762	-		CCNA_03076	0.10	+0.4
3,225,785	+		CCNA_03076	0.11	+0.4
3,225,791	+		CCNA_03076	0.12	+0.4
3,225,793	-		CCNA_03076	0.12	-1.8
3,225,793	-		CCNA_03076	0.12	+0.1
3,225,803	+		CCNA_03076	0.12	-0.8
3,225,811	-		CCNA_03076	0.12	-0.8
3,225,820	+		CCNA_03076	0.13	-0.2
3,225,830	-		CCNA_03076	0.13	+0.4
3,225,833	+		CCNA_03076	0.13	-0.8
3,225,833	+		CCNA_03076	0.13	-1.3
3,225,833	+		CCNA_03076	0.13	+0.5
3,225,836	-		CCNA_03076	0.14	+0.4
3,225,841	-		CCNA_03076	0.14	-0.3
3,225,841	-		CCNA_03076	0.14	-0.6
3,225,841	-		CCNA_03076	0.14	-1.7
3,225,864	-		CCNA_03076	0.15	-0.4
3,225,879	-		CCNA_03076	0.16	-0.2
3,225,879	-		CCNA_03076	0.16	+0.3
3,225,938	-		CCNA_03076	0.18	-2.1
3,225,969	-		CCNA_03076	0.20	-0.1
3,225,973	+		CCNA_03076	0.20	+0.8
3,225,983	+		CCNA_03076	0.20	-2.5
3,226,024	+		CCNA_03076	0.22	+1.2
3,226,043	+		CCNA_03076	0.23	-0.2
3,226,051	-		CCNA_03076	0.23	+0.8
3,226,051	-		CCNA_03076	0.23	-1.7
3,226,106	+		CCNA_03076	0.26	+0.9
3,226,106	+		CCNA_03076	0.26	-0.4
3,226,106	+		CCNA_03076	0.26	-0.7
3,226,109	-		CCNA_03076	0.26	-0.8
3,226,114	-		CCNA_03076	0.26	+1.2
3,226,121	+		CCNA_03076	0.26	+0.3
3,226,121	+		CCNA_03076	0.26	-0.5
3,226,129	-		CCNA_03076	0.27	+0.2
3,226,129	-		CCNA_03076	0.27	-0.3
3,226,129	-		CCNA_03076	0.27	-1.5
3,226,129	-		CCNA_03076	0.27	-1.4
3,226,129	-		CCNA_03076	0.27	+1.4
3,226,153	-		CCNA_03076	0.28	+0.7
3,226,203	-		CCNA_03076	0.30	+0.5
3,226,216	-		CCNA_03076	0.30	-0.9
3,226,258	-		CCNA_03076	0.32	-1.2
3,226,261	-		CCNA_03076	0.32	-0.1
3,226,272	+		CCNA_03076	0.33	-0.3
3,226,322	-		CCNA_03076	0.35	-0.2
3,226,348	-		CCNA_03076	0.36	+1.7
3,226,365	+		CCNA_03076	0.37	-1.5
3,226,387	+		CCNA_03076	0.38	-2.6
3,226,390	-		CCNA_03076	0.38	-0.1
3,226,413	+		CCNA_03076	0.39	+0.7
3,226,418	+		CCNA_03076	0.39	-0.7
3,226,419	-		CCNA_03076	0.40	+0.2
3,226,419	-		CCNA_03076	0.40	+0.1
3,226,421	-		CCNA_03076	0.40	-0.8
3,226,503	-		CCNA_03076	0.43	-0.3
3,226,519	+		CCNA_03076	0.44	+0.5
3,226,527	+		CCNA_03076	0.44	-0.3
3,226,535	-		CCNA_03076	0.45	+0.7
3,226,663	-		CCNA_03076	0.50	-0.5
3,226,663	-		CCNA_03076	0.50	+0.6
3,226,667	+		CCNA_03076	0.51	-1.0
3,226,691	-		CCNA_03076	0.52	-0.4
3,226,693	-		CCNA_03076	0.52	-1.6
3,226,696	-		CCNA_03076	0.52	-1.4
3,226,703	+		CCNA_03076	0.52	-0.1
3,226,705	+		CCNA_03076	0.52	-0.1
3,226,713	-		CCNA_03076	0.53	-0.3
3,226,713	-		CCNA_03076	0.53	-0.0
3,226,713	-		CCNA_03076	0.53	-0.5
3,226,713	-		CCNA_03076	0.53	+0.2
3,226,713	-		CCNA_03076	0.53	-1.1
3,226,749	+		CCNA_03076	0.54	-0.1
3,226,766	+		CCNA_03076	0.55	+1.3
3,226,767	-		CCNA_03076	0.55	+0.7
3,226,774	-		CCNA_03076	0.55	-1.3
3,226,804	-		CCNA_03076	0.57	-0.7
3,226,813	+		CCNA_03076	0.57	+0.4
3,226,828	+		CCNA_03076	0.58	+0.4
3,226,840	-		CCNA_03076	0.58	+0.5
3,226,848	+		CCNA_03076	0.59	+0.0
3,226,899	+		CCNA_03076	0.61	+0.4
3,226,930	-		CCNA_03076	0.62	+0.6
3,226,958	-		CCNA_03076	0.63	-1.0
3,226,994	+		CCNA_03076	0.65	+1.4
3,227,074	+		CCNA_03076	0.69	-0.1
3,227,074	+		CCNA_03076	0.69	+1.7
3,227,082	-		CCNA_03076	0.69	-0.9
3,227,089	+		CCNA_03076	0.69	+0.1
3,227,112	+		CCNA_03076	0.70	-0.0
3,227,120	-		CCNA_03076	0.71	-0.5
3,227,130	-		CCNA_03076	0.71	+0.2
3,227,192	+		CCNA_03076	0.74	-0.3
3,227,192	+		CCNA_03076	0.74	-0.6
3,227,192	+		CCNA_03076	0.74	-1.5
3,227,192	+		CCNA_03076	0.74	+0.5
3,227,192	+		CCNA_03076	0.74	-1.4
3,227,192	+		CCNA_03076	0.74	-0.5
3,227,192	+		CCNA_03076	0.74	-0.0
3,227,200	-		CCNA_03076	0.74	-1.0
3,227,200	-		CCNA_03076	0.74	+0.7
3,227,200	-		CCNA_03076	0.74	-1.0
3,227,216	+		CCNA_03076	0.75	+1.3
3,227,246	+		CCNA_03076	0.76	-0.1
3,227,276	-		CCNA_03076	0.78	+0.5
3,227,280	-		CCNA_03076	0.78	-0.3
3,227,281	-		CCNA_03076	0.78	+0.5
3,227,308	+		CCNA_03076	0.79	+0.4
3,227,315	+		CCNA_03076	0.79	+0.3
3,227,354	-		CCNA_03076	0.81	+0.4
3,227,356	+		CCNA_03076	0.81	+0.2
3,227,371	-		CCNA_03076	0.82	-3.0
3,227,403	-		CCNA_03076	0.83	-1.3
3,227,411	-		CCNA_03076	0.84	-1.6
3,227,452	-		CCNA_03076	0.85	+0.7
3,227,463	+		CCNA_03076	0.86	-1.1
3,227,463	+		CCNA_03076	0.86	-0.7
3,227,463	+		CCNA_03076	0.86	-1.7
3,227,494	+		CCNA_03076	0.87	-0.2
3,227,495	+		CCNA_03076	0.87	+0.4
3,227,497	-		CCNA_03076	0.87	+0.4
3,227,501	+		CCNA_03076	0.88	+2.7
3,227,513	+		CCNA_03076	0.88	-0.3
3,227,542	+		CCNA_03076	0.89	-0.5
3,227,561	-				-1.4
3,227,632	+				-1.0
3,227,632	+				-0.1
3,227,640	-				+0.4
3,227,655	-				+0.1
3,227,683	-				-0.0
3,227,684	+				+0.3
3,227,696	+				+0.0
3,227,701	+				+0.1
3,227,701	+				-0.0
3,227,701	+				-0.2
3,227,701	+				-0.9
3,227,701	+				-0.4
3,227,709	-				-0.8
3,227,709	-				-0.2
3,227,713	+				+0.4
3,227,721	-				-1.0
3,227,735	-				-0.3
3,227,757	-				+0.5
3,227,757	-				+0.2
3,227,791	-				-0.3
3,227,842	+				-1.8
3,227,849	-				-0.6
3,227,949	-				-0.2
3,227,980	-		CCNA_03077	0.12	-0.4
3,227,985	-		CCNA_03077	0.15	-0.6
3,227,985	-		CCNA_03077	0.15	-1.0
3,228,098	+		CCNA_03077	0.75	-0.6
3,228,109	-		CCNA_03077	0.81	+0.2
3,228,146	-				+0.4
3,228,230	+		CCNA_03078	0.75	+0.8
3,228,238	-		CCNA_03078	0.82	+0.5
3,228,242	+		CCNA_03078	0.85	+0.5
3,228,250	-				-0.1
3,228,278	-				+0.3
3,228,280	+				+0.4
3,228,280	+				-0.5
3,228,285	+				-0.7
3,228,293	-				-0.1
3,228,306	-				+0.4
3,228,323	+				-1.5
3,228,326	-				+0.3
3,228,370	-		CCNA_03079	0.23	+0.3
3,228,382	+		CCNA_03079	0.26	+1.4
3,228,398	+		CCNA_03079	0.31	-0.9
3,228,406	-		CCNA_03079	0.33	+0.0
3,228,436	+		CCNA_03079	0.42	+0.5
3,228,495	-		CCNA_03079	0.60	-0.1
3,228,506	+		CCNA_03079	0.63	+1.3
3,228,519	-		CCNA_03079	0.67	-0.7
3,228,535	+		CCNA_03079	0.72	-0.6
3,228,547	+		CCNA_03079	0.75	-0.2
3,228,551	+		CCNA_03079	0.76	-0.7
3,228,559	-		CCNA_03079	0.79	-0.7
3,228,575	+		CCNA_03079	0.84	+0.8
3,228,575	+		CCNA_03079	0.84	-0.2
3,228,575	+		CCNA_03079	0.84	-0.8
3,228,575	+		CCNA_03079	0.84	-1.1
3,228,597	-				+1.0
3,228,777	-		CCNA_03080	0.79	-2.5