Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03048

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
3,200,391	-		CCNA_03046	0.54	-2.5
3,200,391	-		CCNA_03046	0.54	+1.0
3,200,419	-		CCNA_03046	0.59	+2.7
3,200,444	-		CCNA_03046	0.64	-0.2
3,200,463	+		CCNA_03046	0.67	+0.4
3,200,463	+		CCNA_03046	0.67	-0.1
3,200,463	+		CCNA_03046	0.67	-0.7
3,200,471	-		CCNA_03046	0.69	-0.3
3,200,511	+		CCNA_03046	0.76	+1.7
3,200,532	+		CCNA_03046	0.80	-0.1
3,200,532	+		CCNA_03046	0.80	+0.0
3,200,535	-		CCNA_03046	0.80	+1.7
3,200,539	-		CCNA_03046	0.81	+0.5
3,200,540	-		CCNA_03046	0.81	+0.6
3,200,540	-		CCNA_03046	0.81	-1.1
3,200,540	-		CCNA_03046	0.81	-0.7
3,200,554	-		CCNA_03046	0.84	+0.5
3,200,587	+				-0.2
3,200,587	+				+0.2
3,200,587	+				+0.7
3,200,587	+				-3.3
3,200,587	+				-0.4
3,200,595	-				+0.2
3,200,595	-				-0.2
3,200,595	-				+0.3
3,200,595	-				+0.3
3,200,595	-				+1.0
3,200,609	+				+0.1
3,200,617	-				+1.0
3,200,653	-				+0.4
3,200,653	-				-0.9
3,200,655	+				+0.2
3,200,678	-				+0.1
3,200,762	+		CCNA_03047	0.16	-1.0
3,200,823	-		CCNA_03047	0.24	+0.7
3,200,857	-		CCNA_03047	0.29	+0.4
3,200,867	-		CCNA_03047	0.30	-0.3
3,200,883	+		CCNA_03047	0.32	-0.4
3,200,883	+		CCNA_03047	0.32	-0.5
3,200,981	-		CCNA_03047	0.45	+0.2
3,200,986	-		CCNA_03047	0.46	+0.3
3,201,016	-		CCNA_03047	0.50	-0.7
3,201,059	-		CCNA_03047	0.56	+0.0
3,201,133	+		CCNA_03047	0.65	+0.4
3,201,141	-		CCNA_03047	0.66	+0.2
3,201,154	+		CCNA_03047	0.68	-1.1
3,201,166	+		CCNA_03047	0.70	+1.3
3,201,174	-		CCNA_03047	0.71	+0.5
3,201,199	+		CCNA_03047	0.74	-0.2
3,201,248	+		CCNA_03047	0.81	+2.7
3,201,248	+		CCNA_03047	0.81	+0.3
3,201,248	+		CCNA_03047	0.81	-1.1
3,201,248	+		CCNA_03047	0.81	-0.0
3,201,256	-		CCNA_03047	0.82	-0.4
3,201,256	-		CCNA_03047	0.82	+0.3
3,201,288	+		CCNA_03047	0.86	-1.0
3,201,306	+		CCNA_03047	0.88	-0.0
3,201,306	+		CCNA_03047	0.88	+0.9
3,201,306	+		CCNA_03047	0.88	+0.3
3,201,306	+		CCNA_03047	0.88	-0.2
3,201,327	+				-1.4
3,201,335	-				+0.9
3,201,345	-				+0.1
3,201,386	-				-1.2
3,201,409	+				+1.0
3,201,434	+				+0.6
3,201,491	+				-1.6
3,201,514	+				-1.7
3,201,514	+				-0.9
3,201,522	-				+0.8
3,201,541	-				-0.7
3,201,575	+		CCNA_03048	0.12	+0.1
3,201,583	-		CCNA_03048	0.12	+0.3
3,201,583	-		CCNA_03048	0.12	-0.0
3,201,640	-		CCNA_03048	0.16	-0.4
3,201,734	+		CCNA_03048	0.22	-0.3
3,201,734	+		CCNA_03048	0.22	+1.6
3,201,742	-		CCNA_03048	0.22	+0.1
3,201,770	+		CCNA_03048	0.24	-0.5
3,201,770	+		CCNA_03048	0.24	-0.3
3,201,770	+		CCNA_03048	0.24	-0.6
3,201,771	-		CCNA_03048	0.24	+0.6
3,201,772	-		CCNA_03048	0.24	+0.3
3,201,778	-		CCNA_03048	0.25	-0.0
3,201,778	-		CCNA_03048	0.25	+2.2
3,201,778	-		CCNA_03048	0.25	-0.5
3,201,778	-		CCNA_03048	0.25	-0.2
3,201,778	-		CCNA_03048	0.25	+0.2
3,201,778	-		CCNA_03048	0.25	-1.7
3,201,780	+		CCNA_03048	0.25	+1.6
3,201,780	+		CCNA_03048	0.25	+1.8
3,201,780	+		CCNA_03048	0.25	+2.1
3,201,788	-		CCNA_03048	0.25	-0.1
3,201,821	+		CCNA_03048	0.27	-0.2
3,201,867	+		CCNA_03048	0.30	+0.8
3,201,904	+		CCNA_03048	0.33	+0.3
3,201,952	+		CCNA_03048	0.36	-0.2
3,201,952	+		CCNA_03048	0.36	+0.2
3,201,960	-		CCNA_03048	0.36	+0.5
3,201,960	-		CCNA_03048	0.36	-2.1
3,202,047	+		CCNA_03048	0.42	+0.0
3,202,047	+		CCNA_03048	0.42	-0.1
3,202,070	+		CCNA_03048	0.43	-0.4
3,202,088	-		CCNA_03048	0.44	+0.3
3,202,097	-		CCNA_03048	0.45	-0.6
3,202,115	+		CCNA_03048	0.46	+0.2
3,202,115	+		CCNA_03048	0.46	-0.1
3,202,115	+		CCNA_03048	0.46	+0.0
3,202,115	+		CCNA_03048	0.46	-0.1
3,202,115	+		CCNA_03048	0.46	-0.7
3,202,123	-		CCNA_03048	0.46	+0.5
3,202,218	+		CCNA_03048	0.53	+0.7
3,202,228	+		CCNA_03048	0.53	+0.5
3,202,231	-		CCNA_03048	0.53	+0.1
3,202,231	-		CCNA_03048	0.53	+0.1
3,202,257	-		CCNA_03048	0.55	+0.4
3,202,318	-		CCNA_03048	0.59	+0.2
3,202,339	+		CCNA_03048	0.60	-0.2
3,202,356	+		CCNA_03048	0.61	-0.2
3,202,390	+		CCNA_03048	0.63	+0.3
3,202,390	+		CCNA_03048	0.63	+0.2
3,202,390	+		CCNA_03048	0.63	+0.8
3,202,390	+		CCNA_03048	0.63	+0.0
3,202,396	-		CCNA_03048	0.64	+1.0
3,202,398	-		CCNA_03048	0.64	+0.3
3,202,398	-		CCNA_03048	0.64	+1.7
3,202,398	-		CCNA_03048	0.64	+1.0
3,202,398	-		CCNA_03048	0.64	+0.8
3,202,398	-		CCNA_03048	0.64	-0.0
3,202,398	-		CCNA_03048	0.64	+0.3
3,202,403	-		CCNA_03048	0.64	-0.1
3,202,446	+		CCNA_03048	0.67	-0.2
3,202,446	+		CCNA_03048	0.67	-0.5
3,202,446	+		CCNA_03048	0.67	+1.0
3,202,454	-		CCNA_03048	0.67	+0.3
3,202,454	-		CCNA_03048	0.67	-0.1
3,202,454	-		CCNA_03048	0.67	-0.2
3,202,454	-		CCNA_03048	0.67	+0.9
3,202,454	-		CCNA_03048	0.67	-0.7
3,202,454	-		CCNA_03048	0.67	+0.2
3,202,454	-		CCNA_03048	0.67	+0.7
3,202,454	-		CCNA_03048	0.67	+0.4
3,202,454	-		CCNA_03048	0.67	+0.9
3,202,507	-		CCNA_03048	0.71	+0.1
3,202,545	+		CCNA_03048	0.73	-0.8
3,202,639	+		CCNA_03048	0.79	-0.6
3,202,647	-		CCNA_03048	0.80	+0.1
3,202,648	-		CCNA_03048	0.80	+1.0
3,202,652	+		CCNA_03048	0.80	-0.0
3,202,678	-		CCNA_03048	0.82	-0.1
3,202,702	-		CCNA_03048	0.83	+0.1
3,202,720	+		CCNA_03048	0.84	+0.5
3,202,745	+		CCNA_03048	0.86	+0.2
3,202,745	+		CCNA_03048	0.86	+0.2
3,202,750	+		CCNA_03048	0.86	-0.9
3,202,755	+		CCNA_03048	0.87	+0.1
3,202,755	+		CCNA_03048	0.87	+0.4
3,202,763	-		CCNA_03048	0.87	-0.9
3,202,763	-		CCNA_03048	0.87	-0.2
3,202,763	-		CCNA_03048	0.87	-0.1
3,202,763	-		CCNA_03048	0.87	-1.6
3,202,774	+		CCNA_03048	0.88	-0.9
3,202,774	+		CCNA_03048	0.88	+0.4
3,202,782	-		CCNA_03048	0.88	+0.1
3,202,850	+				-0.1
3,202,881	+				+1.0
3,202,882	-				+0.1
3,202,898	+				-1.2
3,202,903	+				-0.1
3,202,906	-				+0.0
3,202,934	+				+0.6
3,202,942	+				-0.0
3,202,950	-				-0.4
3,202,950	-				-0.1
3,202,970	-				-0.1
3,203,002	+				-0.5
3,203,002	+				+0.1
3,203,002	+				-1.8
3,203,002	+				-0.7
3,203,002	+				-0.1
3,203,044	+				-1.9
3,203,044	+				-0.6
3,203,045	-				+0.4
3,203,052	-				-0.2
3,203,071	-				-0.2
3,203,141	+				-1.4
3,203,184	-		CCNA_03049	0.11	-0.4
3,203,211	+		CCNA_03049	0.13	-0.8
3,203,226	+		CCNA_03049	0.14	+1.1
3,203,226	+		CCNA_03049	0.14	-0.7
3,203,282	+		CCNA_03049	0.18	-2.4
3,203,282	+		CCNA_03049	0.18	-1.2
3,203,296	-		CCNA_03049	0.19	+0.8
3,203,375	+		CCNA_03049	0.24	-0.4
3,203,375	-		CCNA_03049	0.24	+0.6
3,203,389	-		CCNA_03049	0.25	-0.5
3,203,459	-		CCNA_03049	0.30	-0.0
3,203,474	+		CCNA_03049	0.31	+0.1
3,203,487	-		CCNA_03049	0.32	+0.6
3,203,586	+		CCNA_03049	0.39	+0.4
3,203,594	+		CCNA_03049	0.39	-0.5
3,203,594	-		CCNA_03049	0.39	-0.9
3,203,608	+		CCNA_03049	0.40	+0.1
3,203,626	-		CCNA_03049	0.41	-0.3
3,203,637	-		CCNA_03049	0.42	+0.7
3,203,664	-		CCNA_03049	0.44	-0.3
3,203,664	-		CCNA_03049	0.44	+1.5
3,203,666	+		CCNA_03049	0.44	+0.1
3,203,695	-		CCNA_03049	0.46	-0.3
3,203,695	-		CCNA_03049	0.46	+0.4
3,203,784	-		CCNA_03049	0.52	-0.8
3,203,827	+		CCNA_03049	0.55	-0.2
3,203,827	+		CCNA_03049	0.55	+0.8
3,203,827	+		CCNA_03049	0.55	+0.4
3,203,882	-		CCNA_03049	0.59	-0.9
3,203,910	+		CCNA_03049	0.61	-1.6
3,203,949	+		CCNA_03049	0.63	-1.2
3,203,949	+		CCNA_03049	0.63	-0.5
3,203,949	+		CCNA_03049	0.63	-0.9
3,203,949	+		CCNA_03049	0.63	-0.8
3,203,952	-		CCNA_03049	0.64	-0.9
3,203,957	-		CCNA_03049	0.64	+0.4
3,203,957	-		CCNA_03049	0.64	+1.2
3,203,963	+		CCNA_03049	0.64	+0.2
3,203,963	+		CCNA_03049	0.64	+0.7