Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03014

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
3,166,603	+		CCNA_03013	0.40	-0.9
3,166,662	-		CCNA_03013	0.44	+0.7
3,166,668	+		CCNA_03013	0.44	-0.1
3,166,705	+		CCNA_03013	0.47	-0.9
3,166,705	+		CCNA_03013	0.47	-1.8
3,166,881	+		CCNA_03013	0.58	-0.1
3,166,904	+		CCNA_03013	0.59	-1.4
3,166,904	-		CCNA_03013	0.59	-0.4
3,166,910	+		CCNA_03013	0.60	+0.0
3,166,918	-		CCNA_03013	0.60	-0.6
3,166,951	-		CCNA_03013	0.62	+0.9
3,166,974	+		CCNA_03013	0.64	-0.2
3,167,016	+		CCNA_03013	0.66	-1.1
3,167,016	+		CCNA_03013	0.66	-0.8
3,167,024	-		CCNA_03013	0.67	-1.1
3,167,024	-		CCNA_03013	0.67	-0.7
3,167,222	+		CCNA_03013	0.79	+0.4
3,167,309	+		CCNA_03013	0.85	-0.1
3,167,441	+				+0.7
3,167,475	+				-0.2
3,167,542	+				+1.6
3,167,542	+				+0.1
3,167,542	+				+0.2
3,167,542	+				-0.9
3,167,550	-				+1.3
3,167,581	-				-1.4
3,167,641	+				+0.2
3,167,641	+				+0.8
3,167,641	+				+0.6
3,167,641	+				+0.2
3,167,649	-				+0.6
3,167,649	-				-0.5
3,167,649	-				+0.3
3,167,649	-				-0.1
3,167,649	-				+0.9
3,167,649	-				+0.3
3,167,649	-				+0.3
3,167,649	-				+0.0
3,167,658	-		CCNA_03014	0.10	-0.8
3,167,660	+		CCNA_03014	0.11	-0.7
3,167,660	+		CCNA_03014	0.11	-0.8
3,167,660	+		CCNA_03014	0.11	-0.3
3,167,668	-		CCNA_03014	0.12	-1.2
3,167,668	-		CCNA_03014	0.12	+0.5
3,167,668	-		CCNA_03014	0.12	+0.5
3,167,683	-		CCNA_03014	0.13	+0.1
3,167,709	+		CCNA_03014	0.16	-0.5
3,167,712	-		CCNA_03014	0.16	+0.1
3,167,714	-		CCNA_03014	0.17	+0.1
3,167,729	-		CCNA_03014	0.18	+0.5
3,167,745	-		CCNA_03014	0.20	-0.0
3,167,745	-		CCNA_03014	0.20	-0.3
3,167,765	+		CCNA_03014	0.22	+0.1
3,167,794	-		CCNA_03014	0.26	+0.1
3,167,817	-		CCNA_03014	0.28	-0.4
3,167,829	-		CCNA_03014	0.30	+0.7
3,167,835	+		CCNA_03014	0.30	+0.6
3,167,835	+		CCNA_03014	0.30	-0.4
3,167,849	+		CCNA_03014	0.32	+1.0
3,167,862	-		CCNA_03014	0.33	-0.3
3,167,885	-		CCNA_03014	0.36	+0.1
3,167,890	-		CCNA_03014	0.36	+0.5
3,167,910	-		CCNA_03014	0.39	+0.9
3,167,920	-		CCNA_03014	0.40	+0.2
3,167,940	-		CCNA_03014	0.42	-0.4
3,167,970	+		CCNA_03014	0.45	-0.2
3,168,028	-		CCNA_03014	0.52	+0.3
3,168,028	-		CCNA_03014	0.52	-0.8
3,168,053	-		CCNA_03014	0.55	+1.3
3,168,068	-		CCNA_03014	0.56	-0.4
3,168,163	+		CCNA_03014	0.67	-1.4
3,168,172	+		CCNA_03014	0.68	-1.0
3,168,192	-		CCNA_03014	0.70	-0.0
3,168,202	-		CCNA_03014	0.71	+1.0
3,168,207	-		CCNA_03014	0.72	+1.2
3,168,372	+				-0.1
3,168,432	+				+0.2
3,168,452	+				-2.8
3,168,459	-		CCNA_03015	0.12	-0.9
3,168,460	-		CCNA_03015	0.13	+2.0
3,168,498	+		CCNA_03015	0.28	+0.8
3,168,504	+		CCNA_03015	0.30	-0.0
3,168,504	+		CCNA_03015	0.30	-0.1
3,168,512	-		CCNA_03015	0.33	-1.9
3,168,626	+		CCNA_03015	0.77	+0.6
3,168,636	+		CCNA_03015	0.81	-0.5
3,168,644	-		CCNA_03015	0.84	+0.0
3,168,679	+				-0.7
3,168,687	-				+0.2
3,168,693	+				+0.3
3,168,772	+		CCNA_03016	0.15	-0.4
3,168,810	-		CCNA_03016	0.23	-0.1
3,168,824	+		CCNA_03016	0.26	+0.2
3,168,912	-		CCNA_03016	0.43	+0.1
3,168,918	+		CCNA_03016	0.45	-0.0
3,168,963	+		CCNA_03016	0.54	-0.5
3,168,963	+		CCNA_03016	0.54	-0.5
3,168,978	-		CCNA_03016	0.57	-0.3
3,168,980	+		CCNA_03016	0.57	+0.6
3,168,988	-		CCNA_03016	0.59	+0.2
3,168,988	-		CCNA_03016	0.59	+0.8
3,168,988	-		CCNA_03016	0.59	+0.2
3,168,993	+		CCNA_03016	0.60	-0.6
3,169,001	-		CCNA_03016	0.61	-0.3
3,169,105	+		CCNA_03016	0.82	-0.5
3,169,152	-				+0.4
3,169,174	-				+0.7
3,169,209	-				-0.9
3,169,209	-				-0.3
3,169,255	+				-1.6
3,169,294	+				-1.2
3,169,294	+				-1.1
3,169,341	+		CCNA_03017	0.15	-0.4
3,169,363	-		CCNA_03017	0.17	-0.0
3,169,365	+		CCNA_03017	0.17	+0.5
3,169,365	+		CCNA_03017	0.17	+0.4