Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_02971

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
3,126,053	+				-0.9
3,126,073	-				-0.8
3,126,089	+				+0.2
3,126,089	+				-0.2
3,126,089	+				-0.8
3,126,097	-				+0.8
3,126,129	-		CCNA_02969	0.13	-0.4
3,126,181	+		CCNA_02969	0.23	-1.1
3,126,194	-		CCNA_02969	0.25	+0.5
3,126,226	+		CCNA_02969	0.31	+0.1
3,126,231	-		CCNA_02969	0.32	+0.2
3,126,258	+		CCNA_02969	0.37	+1.0
3,126,258	+		CCNA_02969	0.37	+0.1
3,126,266	-		CCNA_02969	0.38	-1.8
3,126,266	-		CCNA_02969	0.38	+1.2
3,126,266	-		CCNA_02969	0.38	-0.4
3,126,266	-		CCNA_02969	0.38	+0.8
3,126,317	-		CCNA_02969	0.47	+0.1
3,126,360	+		CCNA_02969	0.55	+0.2
3,126,373	-		CCNA_02969	0.57	-1.4
3,126,410	+		CCNA_02969	0.64	+0.2
3,126,413	-		CCNA_02969	0.65	-1.6
3,126,452	-		CCNA_02969	0.72	-2.2
3,126,503	+		CCNA_02969	0.81	-0.0
3,126,509	+		CCNA_02969	0.82	+1.2
3,126,517	-		CCNA_02969	0.83	-1.8
3,126,544	-		CCNA_02969	0.88	+1.6
3,126,598	+				+0.3
3,126,603	+				-1.0
3,126,611	+				-1.2
3,126,611	-				-0.2
3,126,667	+				-1.7
3,126,668	+				-0.0
3,126,668	+				+0.6
3,126,676	-				+0.3
3,126,676	-				+0.5
3,126,686	-				+0.2
3,126,743	-		CCNA_02970	0.24	+0.2
3,126,828	-		CCNA_02970	0.47	-0.3
3,126,863	-		CCNA_02970	0.57	-0.3
3,126,876	+		CCNA_02970	0.60	-0.2
3,126,913	+		CCNA_02970	0.70	+0.8
3,126,939	-		CCNA_02970	0.77	+0.3
3,126,964	+		CCNA_02970	0.84	-0.7
3,127,017	+				-1.6
3,127,075	+				-0.8
3,127,085	+				-0.1
3,127,085	+				-1.0
3,127,092	+				-0.3
3,127,100	-				+2.3
3,127,102	-				-0.1
3,127,109	+				-0.2
3,127,122	+				-0.8
3,127,123	-				-0.1
3,127,161	+		CCNA_02971	0.13	-2.2
3,127,163	+		CCNA_02971	0.13	-0.3
3,127,163	+		CCNA_02971	0.13	-0.9
3,127,241	-		CCNA_02971	0.21	-0.2
3,127,261	-		CCNA_02971	0.23	+0.8
3,127,268	-		CCNA_02971	0.24	-0.0
3,127,303	+		CCNA_02971	0.27	-0.9
3,127,336	+		CCNA_02971	0.30	-0.7
3,127,344	-		CCNA_02971	0.31	+1.2
3,127,344	-		CCNA_02971	0.31	+0.3
3,127,344	-		CCNA_02971	0.31	+0.0
3,127,345	-		CCNA_02971	0.31	+0.2
3,127,404	+		CCNA_02971	0.37	+0.2
3,127,404	+		CCNA_02971	0.37	-1.7
3,127,404	+		CCNA_02971	0.37	-0.1
3,127,404	+		CCNA_02971	0.37	-0.5
3,127,412	-		CCNA_02971	0.38	+0.1
3,127,412	-		CCNA_02971	0.38	+0.9
3,127,412	-		CCNA_02971	0.38	+0.5
3,127,412	-		CCNA_02971	0.38	+0.5
3,127,412	-		CCNA_02971	0.38	-0.9
3,127,412	-		CCNA_02971	0.38	+0.5
3,127,412	-		CCNA_02971	0.38	+0.4
3,127,421	+		CCNA_02971	0.38	-0.9
3,127,429	-		CCNA_02971	0.39	+0.4
3,127,437	-		CCNA_02971	0.40	-0.7
3,127,442	-		CCNA_02971	0.41	+1.1
3,127,455	-		CCNA_02971	0.42	+0.6
3,127,484	-		CCNA_02971	0.45	-0.0
3,127,499	-		CCNA_02971	0.46	-1.1
3,127,530	+		CCNA_02971	0.49	-0.3
3,127,535	+		CCNA_02971	0.50	+0.2
3,127,541	+		CCNA_02971	0.50	-0.7
3,127,548	+		CCNA_02971	0.51	-0.6
3,127,573	-		CCNA_02971	0.53	+0.9
3,127,607	-		CCNA_02971	0.57	+0.2
3,127,628	+		CCNA_02971	0.59	-0.4
3,127,636	-		CCNA_02971	0.59	-0.2
3,127,642	-		CCNA_02971	0.60	+0.6
3,127,652	+		CCNA_02971	0.61	-1.3
3,127,654	+		CCNA_02971	0.61	-0.1
3,127,664	+		CCNA_02971	0.62	+1.2
3,127,672	-		CCNA_02971	0.63	+0.1
3,127,672	-		CCNA_02971	0.63	+0.2
3,127,672	-		CCNA_02971	0.63	-0.1
3,127,687	+		CCNA_02971	0.64	-0.9
3,127,687	+		CCNA_02971	0.64	-0.8
3,127,695	-		CCNA_02971	0.65	-0.3
3,127,748	+		CCNA_02971	0.70	-1.7
3,127,768	-		CCNA_02971	0.72	-0.3
3,127,779	+		CCNA_02971	0.73	+0.3
3,127,779	+		CCNA_02971	0.73	+0.7
3,127,859	+		CCNA_02971	0.81	-0.2
3,127,880	+		CCNA_02971	0.83	+0.1
3,127,892	-		CCNA_02971	0.84	+0.4
3,127,902	+		CCNA_02971	0.85	-1.3
3,127,937	+		CCNA_02971	0.89	-0.6
3,127,937	+		CCNA_02971	0.89	-0.2
3,127,947	+		CCNA_02971	0.90	-0.6
3,127,947	+		CCNA_02971	0.90	-1.0
3,127,947	+		CCNA_02971	0.90	-1.5
3,127,947	+		CCNA_02971	0.90	-0.8
3,127,954	-				-0.7
3,127,954	-				+2.0
3,127,955	-				+0.0
3,127,955	-				-0.6
3,127,957	+				-0.6
3,127,957	+				+0.3
3,127,962	+				+0.2
3,127,965	-				-0.8
3,127,983	+				+0.2
3,127,983	+				-0.6
3,127,991	-				+1.2
3,128,053	+				-0.2
3,128,102	+				-1.9
3,128,187	-				-0.4
3,128,216	+		CCNA_02972	0.14	+0.9
3,128,258	+		CCNA_02972	0.21	+1.8
3,128,268	-		CCNA_02972	0.22	-1.2
3,128,288	+		CCNA_02972	0.26	-0.0
3,128,288	+		CCNA_02972	0.26	-0.2
3,128,360	+		CCNA_02972	0.37	-0.5
3,128,368	-		CCNA_02972	0.38	-0.6
3,128,396	+		CCNA_02972	0.43	+1.5
3,128,422	+		CCNA_02972	0.47	+0.2
3,128,473	+		CCNA_02972	0.55	-1.7
3,128,478	+		CCNA_02972	0.56	-0.4
3,128,481	-		CCNA_02972	0.57	-0.2
3,128,494	-		CCNA_02972	0.59	+0.0
3,128,531	-		CCNA_02972	0.65	+1.3
3,128,531	-		CCNA_02972	0.65	-0.4
3,128,554	+		CCNA_02972	0.68	-0.4
3,128,597	+		CCNA_02972	0.75	-0.5
3,128,603	+		CCNA_02972	0.76	-0.8
3,128,609	+		CCNA_02972	0.77	+0.4
3,128,610	+		CCNA_02972	0.77	-0.4
3,128,610	+		CCNA_02972	0.77	-1.2
3,128,610	+		CCNA_02972	0.77	-0.1
3,128,610	+		CCNA_02972	0.77	-0.2
3,128,610	+		CCNA_02972	0.77	-0.2
3,128,615	+		CCNA_02972	0.78	-0.9
3,128,618	-		CCNA_02972	0.79	-0.8
3,128,618	-		CCNA_02972	0.79	-0.2
3,128,618	-		CCNA_02972	0.79	+0.1
3,128,625	+		CCNA_02972	0.80	+0.1
3,128,625	+		CCNA_02972	0.80	-0.5
3,128,635	+		CCNA_02972	0.81	-0.1
3,128,663	-		CCNA_02972	0.86	+0.4
3,128,722	+				-1.0
3,128,763	+				-0.9
3,128,763	-				-0.7
3,128,767	-				+0.0
3,128,797	+				+0.9
3,128,810	-				+1.4
3,128,814	+				-0.4
3,128,850	+		CCNA_02973	0.13	+1.2
3,128,858	-		CCNA_02973	0.16	+0.8
3,128,860	-		CCNA_02973	0.17	-3.1
3,128,886	-		CCNA_02973	0.26	-0.1
3,128,930	+		CCNA_02973	0.41	-1.6
3,128,930	+		CCNA_02973	0.41	+0.0
3,128,931	+		CCNA_02973	0.41	-0.9
3,128,931	+		CCNA_02973	0.41	+0.4
3,128,931	+		CCNA_02973	0.41	-0.9
3,128,938	-		CCNA_02973	0.44	-0.4
3,128,938	-		CCNA_02973	0.44	-0.3
3,128,939	-		CCNA_02973	0.44	-0.9
3,128,939	-		CCNA_02973	0.44	-1.2
3,128,944	-		CCNA_02973	0.46	-0.6
3,128,962	+		CCNA_02973	0.52	-0.6
3,128,970	-		CCNA_02973	0.55	+0.5
3,128,978	-		CCNA_02973	0.57	-0.8