Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_02579

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
2,728,934	+		CCNA_02577	0.86	+0.6
2,728,960	+				+0.6
2,728,968	-				+0.8
2,728,968	-				-0.2
2,728,995	-				-0.4
2,729,000	+				-0.2
2,729,013	-				-0.0
2,729,059	+				-1.4
2,729,082	+				+0.2
2,729,110	-				-0.4
2,729,120	+				+0.4
2,729,134	-				-0.3
2,729,148	+				+0.2
2,729,163	-				-0.8
2,729,315	-		CCNA_02578	0.18	+0.5
2,729,328	-		CCNA_02578	0.20	+0.8
2,729,384	-		CCNA_02578	0.29	+0.9
2,729,384	-		CCNA_02578	0.29	+0.5
2,729,412	-		CCNA_02578	0.33	+0.0
2,729,493	+		CCNA_02578	0.46	-0.1
2,729,501	-		CCNA_02578	0.47	+0.1
2,729,506	+		CCNA_02578	0.48	+0.1
2,729,528	+		CCNA_02578	0.51	-0.2
2,729,528	+		CCNA_02578	0.51	+0.6
2,729,528	+		CCNA_02578	0.51	-0.3
2,729,528	+		CCNA_02578	0.51	+1.0
2,729,528	+		CCNA_02578	0.51	-0.6
2,729,536	-		CCNA_02578	0.52	+0.2
2,729,549	+		CCNA_02578	0.54	-0.5
2,729,557	-		CCNA_02578	0.56	+0.5
2,729,568	+		CCNA_02578	0.57	+0.2
2,729,576	-		CCNA_02578	0.59	+0.3
2,729,613	-		CCNA_02578	0.64	-0.0
2,729,653	+		CCNA_02578	0.71	-0.4
2,729,653	+		CCNA_02578	0.71	+0.6
2,729,653	+		CCNA_02578	0.71	+0.7
2,729,653	+		CCNA_02578	0.71	-1.1
2,729,661	-		CCNA_02578	0.72	-0.0
2,729,661	-		CCNA_02578	0.72	+1.4
2,729,661	-		CCNA_02578	0.72	+0.1
2,729,675	+		CCNA_02578	0.74	-0.7
2,729,675	+		CCNA_02578	0.74	-0.0
2,729,687	+		CCNA_02578	0.76	-0.9
2,729,688	-		CCNA_02578	0.76	+1.2
2,729,695	-		CCNA_02578	0.77	+0.1
2,729,695	-		CCNA_02578	0.77	-0.3
2,729,695	-		CCNA_02578	0.77	+0.5
2,729,699	-		CCNA_02578	0.78	+1.0
2,729,721	-		CCNA_02578	0.81	+0.2
2,729,743	-		CCNA_02578	0.84	-2.5
2,729,776	-		CCNA_02578	0.90	-0.1
2,729,915	+				-1.7
2,729,967	+				+2.0
2,729,967	+				+0.1
2,729,968	+				+0.5
2,729,981	-				+0.1
2,729,998	+				+0.2
2,730,006	-				+1.3
2,730,018	+				-0.6
2,730,021	-				-0.3
2,730,028	+				+0.8
2,730,050	-				-0.4
2,730,056	+				+0.1
2,730,056	+				-0.9
2,730,074	-		CCNA_02579	0.11	-0.6
2,730,095	+		CCNA_02579	0.13	+1.8
2,730,178	-		CCNA_02579	0.20	+0.7
2,730,205	+		CCNA_02579	0.22	+0.7
2,730,231	+		CCNA_02579	0.24	+0.3
2,730,231	+		CCNA_02579	0.24	-0.7
2,730,236	+		CCNA_02579	0.24	-1.2
2,730,239	-		CCNA_02579	0.24	+0.1
2,730,244	-		CCNA_02579	0.25	-1.8
2,730,284	+		CCNA_02579	0.28	-0.8
2,730,330	+		CCNA_02579	0.31	-1.5
2,730,387	+		CCNA_02579	0.36	+2.0
2,730,400	+		CCNA_02579	0.37	+0.4
2,730,401	-		CCNA_02579	0.37	-0.6
2,730,455	+		CCNA_02579	0.41	-1.1
2,730,509	-		CCNA_02579	0.45	-0.6
2,730,556	-		CCNA_02579	0.49	+1.2
2,730,563	-		CCNA_02579	0.50	-0.6
2,730,590	-		CCNA_02579	0.52	+0.2
2,730,625	+		CCNA_02579	0.55	-0.4
2,730,633	-		CCNA_02579	0.55	-0.6
2,730,654	+		CCNA_02579	0.57	+0.2
2,730,654	+		CCNA_02579	0.57	-0.8
2,730,662	-		CCNA_02579	0.57	+0.2
2,730,662	-		CCNA_02579	0.57	-0.5
2,730,686	-		CCNA_02579	0.59	+0.4
2,730,686	-		CCNA_02579	0.59	-0.6
2,730,691	+		CCNA_02579	0.60	+1.1
2,730,792	+		CCNA_02579	0.68	-1.7
2,730,800	-		CCNA_02579	0.68	+0.0
2,730,800	-		CCNA_02579	0.68	-0.4
2,730,800	-		CCNA_02579	0.68	+0.2
2,730,800	-		CCNA_02579	0.68	-0.2
2,730,800	-		CCNA_02579	0.68	+1.2
2,730,800	-		CCNA_02579	0.68	-0.1
2,730,800	-		CCNA_02579	0.68	-0.1
2,730,800	-		CCNA_02579	0.68	-0.9
2,730,823	-		CCNA_02579	0.70	-0.2
2,730,823	-		CCNA_02579	0.70	-0.0
2,730,887	+		CCNA_02579	0.75	+0.4
2,730,900	-		CCNA_02579	0.76	-0.3
2,730,926	+		CCNA_02579	0.78	+0.2
2,730,926	+		CCNA_02579	0.78	-0.7
2,730,926	+		CCNA_02579	0.78	-0.7
2,730,934	-		CCNA_02579	0.79	-0.8
2,730,934	-		CCNA_02579	0.79	-0.7
2,730,936	+		CCNA_02579	0.79	+0.3
2,730,978	+		CCNA_02579	0.82	-1.6
2,730,987	-		CCNA_02579	0.83	-0.6
2,731,036	+		CCNA_02579	0.87	+0.1
2,731,041	+		CCNA_02579	0.87	+0.1
2,731,049	-		CCNA_02579	0.88	-2.9
2,731,049	-		CCNA_02579	0.88	-0.5
2,731,051	+		CCNA_02579	0.88	-0.3
2,731,054	-		CCNA_02579	0.88	+0.2
2,731,093	-				-0.3
2,731,093	-				+0.7
2,731,103	-				+0.5
2,731,132	+				+0.4
2,731,161	-				-0.6
2,731,172	+				+1.1
2,731,172	+				-1.0
2,731,180	-				+0.1
2,731,226	-				+0.4
2,731,233	+		CCNA_02580	0.11	+0.4
2,731,282	-		CCNA_02580	0.38	-1.4
2,731,342	-		CCNA_02580	0.71	+0.2
2,731,348	+		CCNA_02580	0.74	+0.1
2,731,354	-		CCNA_02580	0.78	-0.9
2,731,386	+				+0.1
2,731,387	+				+1.1
2,731,387	+				+0.3
2,731,413	+				+0.2
2,731,418	+				-0.5
2,731,444	-				-0.5
2,731,480	-				-1.0
2,731,482	-				+0.3
2,731,508	+				-0.2
2,731,508	+				+0.2
2,731,508	+				-0.1
2,731,508	+				-1.4
2,731,508	+				-0.0
2,731,508	+				-0.5
2,731,512	-				-0.9
2,731,516	-				+0.1
2,731,525	+				+1.4
2,731,525	+				-1.5
2,731,525	+				+0.8
2,731,525	+				-1.2
2,731,533	-				-1.1
2,731,553	+				+0.5
2,731,553	+				-1.1
2,731,665	-				-0.5
2,731,666	-				-1.3
2,731,682	-				+0.0
2,731,694	-				+0.5
2,731,718	-				+0.5
2,731,722	-				-0.3
2,731,725	+				-0.2
2,731,730	+				-0.7
2,731,730	+				-0.4
2,731,738	-				-1.4
2,731,743	+				-1.5
2,731,745	+				+0.5
2,731,800	-		CCNA_02581	0.20	-0.0
2,731,822	-		CCNA_02581	0.24	-0.4
2,731,846	+		CCNA_02581	0.29	-0.1
2,731,864	-		CCNA_02581	0.33	-1.3
2,731,867	+		CCNA_02581	0.34	+0.4
2,731,880	-		CCNA_02581	0.36	-0.7
2,731,898	+		CCNA_02581	0.40	+0.1
2,731,931	+		CCNA_02581	0.47	-0.4
2,731,975	-		CCNA_02581	0.56	-0.8
2,732,012	+		CCNA_02581	0.63	+2.8
2,732,014	+		CCNA_02581	0.64	+0.2
2,732,020	-		CCNA_02581	0.65	-1.6
2,732,042	-		CCNA_02581	0.70	+0.4
2,732,064	-		CCNA_02581	0.74	+0.8
2,732,067	+		CCNA_02581	0.75	+0.1
2,732,102	-		CCNA_02581	0.82	-0.5
2,732,137	+		CCNA_02581	0.89	+0.6
2,732,182	-				-0.8